Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RNY4P34-201ENST00000364779 95 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 RNU6-25P-201ENST00000383873 107 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 RNU6-1-201ENST00000383898 107 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 RNU6-48P-201ENST00000384161 107 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 RNU6-36P-201ENST00000384172 107 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 RNU6-4P-201ENST00000384205 107 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 RNU6-5P-201ENST00000384238 107 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 RNU6-3P-201ENST00000384314 107 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 RNU6-16P-201ENST00000384385 107 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 RNU6-15P-201ENST00000384534 107 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 RNU6-2-201ENST00000384627 107 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 RNU6-29P-201ENST00000384637 107 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 RNU6-9-201ENST00000384776 107 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 RNU6-33P-201ENST00000384793 107 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 RN7SKP101-201ENST00000411376 320 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 NCOR1P3-201ENST00000420479 303 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 AL513124.1-201ENST00000450410 614 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 FAM206BP-201ENST00000510179 541 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 RNA5SP490-201ENST00000517141 136 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 AC090572.1-201ENST00000519251 160 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 AP005435.4-201ENST00000529514 284 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 AP000889.1-201ENST00000530968 660 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 AC011494.1-201ENST00000596454 237 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 BNIP3P8-201ENST00000597863 560 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 AC011458.1-201ENST00000604034 617 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 AC090578.1-201ENST00000604955 591 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 RNU6-6P-201ENST00000606623 107 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 AC104073.3-201ENST00000610942 955 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 AL590240.4-201ENST00000616908 390 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 MTND4P4-201ENST00000439033 1366 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 U8.3-201ENST00000363321 132 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 SNORD114-6-201ENST00000364393 72 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 RNA5SP363-201ENST00000365072 115 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 Y_RNA.324-201ENST00000365165 102 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 AL627390.1-201ENST00000396055 340 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 Z99497.1-201ENST00000421282 135 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 AL358453.1-201ENST00000422522 250 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 OOSP1P1-201ENST00000423265 274 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 AC243964.1-201ENST00000441814 261 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 HMGN2P18-201ENST00000450680 270 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 SNRPGP7-201ENST00000469016 106 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 AC145146.1-201ENST00000496370 254 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 AC022447.4-201ENST00000504053 364 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 AC005178.1-201ENST00000508392 440 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 COPS8P3-201ENST00000526024 482 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 MIR3169-201ENST00000578032 83 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 MIR548AB-201ENST00000584917 84 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 AC098848.2-201ENST00000588023 330 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 AL034555.1-201ENST00000604816 211 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 AC068944.2-201ENST00000610373 403 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 WWP1P1-201ENST00000466609 2769 ntBASIC1.64□□□□□ -2.15
LRRC40Q9H9A6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 RNU4-15P-201ENST00000362613 141 ntBASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 SNORD32B-201ENST00000364460 84 ntBASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 Y_RNA.560-201ENST00000384689 102 ntBASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 RNU6-550P-201ENST00000391057 101 ntBASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 SNORA12-201ENST00000391162 147 ntBASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 SNORA26.9-201ENST00000391322 122 ntBASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 RNU6-293P-201ENST00000411259 106 ntBASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 HMGB1P18-201ENST00000438801 619 ntBASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 MTND2P4-201ENST00000445034 1004 ntBASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 AC079448.1-201ENST00000449377 373 ntBASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 ART2BP-201ENST00000453501 499 ntBASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 snoU13.15-201ENST00000459407 104 ntBASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 AC132942.1-201ENST00000486753 483 ntBASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 SNORA25.15-201ENST00000516487 89 ntBASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 RNU6-1178P-201ENST00000516674 107 ntBASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 RNU6-410P-201ENST00000517006 107 ntBASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 AP000873.5-201ENST00000533906 236 ntBASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 AC234772.3-201ENST00000602277 528 ntBASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 AC011155.2-201ENST00000623202 216 ntBASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.63□□□□□ -2.15
LRRC40Q9H9A6 Y_RNA.367-201ENST00000365544 101 ntBASIC1.62□□□□□ -2.15
LRRC40Q9H9A6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
LRRC40Q9H9A6 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
LRRC40Q9H9A6 RPS3AP3-201ENST00000411933 242 ntBASIC1.62□□□□□ -2.15
LRRC40Q9H9A6 MTND1P30-201ENST00000441241 901 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms