Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.12□□□□□ -2.07
SSX3Q99909 MTND1P23-201ENST00000416931 372 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.12□□□□□ -2.07
SSX3Q99909 USP9YP8-201ENST00000441913 500 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 snoU13.14-201ENST00000459372 104 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.12□□□□□ -2.07
SSX3Q99909 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SSX3Q99909 RNU6-189P-201ENST00000516120 101 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 Y_RNA.704-201ENST00000516851 102 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 SNORA48.11-201ENST00000517015 89 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 RNU6-586P-201ENST00000517265 104 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.12□□□□□ -2.07
SSX3Q99909 AP000889.2-201ENST00000532684 490 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.12□□□□□ -2.07
SSX3Q99909 HMGB1P33-201ENST00000563485 527 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 AC092747.3-201ENST00000603769 301 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 AC107304.1-201ENST00000604229 296 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 AC012557.2-201ENST00000605919 418 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 AC092954.2-201ENST00000609103 430 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.12□□□□□ -2.07
SSX3Q99909 IGHVIII-44-202ENST00000636235 289 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SSX3Q99909 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SSX3Q99909 RNA5SP68-201ENST00000363885 119 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 RNU6-827P-201ENST00000365553 106 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 RNU6-38P-201ENST00000384085 107 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 RNU4-52P-201ENST00000384209 138 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 RNU6-1222P-201ENST00000384615 107 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 MIR17-201ENST00000385012 84 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 CBX3P9-201ENST00000402326 552 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 AL590002.1-201ENST00000406554 418 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 U3.40-201ENST00000408706 208 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 RNU6-648P-201ENST00000410190 107 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.11□□□□□ -2.07
SSX3Q99909 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.11□□□□□ -2.07
SSX3Q99909 SEPT14P3-201ENST00000439401 183 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 AC243964.1-201ENST00000441814 261 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 GPM6BP3-201ENST00000442797 145 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 AL732372.2-207ENST00000445840 183 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SSX3Q99909 SEPT14P2-201ENST00000453405 183 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 AC013470.1-201ENST00000453438 462 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 RNU6-333P-201ENST00000459117 107 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 RNU7-138P-201ENST00000459479 64 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 AC087884.1-201ENST00000469738 328 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 RPL21P99-201ENST00000480369 423 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.11□□□□□ -2.07
SSX3Q99909 AC091885.1-201ENST00000506658 268 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 AK3P2-201ENST00000507976 429 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 SEPT14P4-201ENST00000513445 186 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 SNORA14.1-201ENST00000516113 141 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 RNU6-1281P-201ENST00000516223 105 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 FO082796.1-201ENST00000523795 183 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 COPS8P3-201ENST00000526024 482 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.11□□□□□ -2.07
SSX3Q99909 IMMP1LP2-201ENST00000552954 492 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.11□□□□□ -2.07
SSX3Q99909 MIR4529-201ENST00000578110 78 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 AC091135.1-201ENST00000585943 307 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 AC004492.1-201ENST00000607036 742 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 AC064807.4-201ENST00000607201 407 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 MIR6817-201ENST00000615588 66 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 AL159153.1-201ENST00000619688 317 ntBASIC2.11□□□□□ -2.07
SSX3Q99909 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SSX3Q99909 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.1□□□□□ -2.07
SSX3Q99909 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SSX3Q99909 RNU4-20P-201ENST00000365601 151 ntBASIC2.1□□□□□ -2.07
SSX3Q99909 Y_RNA.378-201ENST00000365652 113 ntBASIC2.1□□□□□ -2.07
SSX3Q99909 RNU6-483P-201ENST00000384088 108 ntBASIC2.1□□□□□ -2.07
SSX3Q99909 RNU6-301P-201ENST00000384277 107 ntBASIC2.1□□□□□ -2.07
SSX3Q99909 SNORA51.11-201ENST00000384442 131 ntBASIC2.1□□□□□ -2.07
SSX3Q99909 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.1□□□□□ -2.07
SSX3Q99909 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.1□□□□□ -2.07
SSX3Q99909 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SSX3Q99909 AL117339.3-201ENST00000418733 162 ntBASIC2.1□□□□□ -2.07
SSX3Q99909 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SSX3Q99909 MTND3P21-201ENST00000433774 331 ntBASIC2.1□□□□□ -2.07
SSX3Q99909 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.1□□□□□ -2.07
SSX3Q99909 MTND3P16-201ENST00000452205 344 ntBASIC2.1□□□□□ -2.07
SSX3Q99909 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SSX3Q99909 RPS27P21-201ENST00000486977 252 ntBASIC2.1□□□□□ -2.07
SSX3Q99909 AC018868.1-201ENST00000491307 315 ntBASIC2.1□□□□□ -2.07
SSX3Q99909 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.1□□□□□ -2.07
SSX3Q99909 RNA5SP148-201ENST00000516527 94 ntBASIC2.1□□□□□ -2.07
SSX3Q99909 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.1□□□□□ -2.07
SSX3Q99909 AC087241.2-201ENST00000535801 324 ntBASIC2.1□□□□□ -2.07
SSX3Q99909 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.1□□□□□ -2.07
SSX3Q99909 AC103996.1-201ENST00000555468 102 ntBASIC2.1□□□□□ -2.07
SSX3Q99909 AL118558.2-201ENST00000556294 238 ntBASIC2.1□□□□□ -2.07
SSX3Q99909 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.1□□□□□ -2.07
SSX3Q99909 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.1□□□□□ -2.07
SSX3Q99909 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.1□□□□□ -2.07
SSX3Q99909 BNIP3P16-201ENST00000589779 534 ntBASIC2.1□□□□□ -2.07
SSX3Q99909 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.1□□□□□ -2.07
SSX3Q99909 AL162413.1-201ENST00000603198 110 ntBASIC2.1□□□□□ -2.07
SSX3Q99909 AC103705.1-201ENST00000619013 241 ntBASIC2.1□□□□□ -2.07
SSX3Q99909 YWHAEP7-203ENST00000622054 312 ntBASIC2.1□□□□□ -2.07
SSX3Q99909 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SSX3Q99909 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms