Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 MTND2P4-201ENST00000445034 1004 ntBASIC1.24□□□□□ -2.21
VAT1Q99536 RNU6-333P-201ENST00000459117 107 ntBASIC1.24□□□□□ -2.21
VAT1Q99536 MTCO2P29-201ENST00000465212 189 ntBASIC1.24□□□□□ -2.21
VAT1Q99536 RNU5F-2P-201ENST00000516066 82 ntBASIC1.24□□□□□ -2.21
VAT1Q99536 AC087441.2-201ENST00000529141 262 ntBASIC1.24□□□□□ -2.21
VAT1Q99536 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.24□□□□□ -2.21
VAT1Q99536 AP002453.2-201ENST00000533503 320 ntBASIC1.24□□□□□ -2.21
VAT1Q99536 AC084364.2-201ENST00000546924 395 ntBASIC1.24□□□□□ -2.21
VAT1Q99536 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.24□□□□□ -2.21
VAT1Q99536 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.24□□□□□ -2.21
VAT1Q99536 MIR4524B-201ENST00000581569 115 ntBASIC1.24□□□□□ -2.21
VAT1Q99536 MIR4298-201ENST00000584380 73 ntBASIC1.24□□□□□ -2.21
VAT1Q99536 AC008521.1-201ENST00000587471 187 ntBASIC1.24□□□□□ -2.21
VAT1Q99536 AL031775.1-201ENST00000607014 887 ntBASIC1.24□□□□□ -2.21
VAT1Q99536 AL353770.2-201ENST00000620024 78 ntBASIC1.24□□□□□ -2.21
VAT1Q99536 AC022513.1-201ENST00000624512 117 ntBASIC1.24□□□□□ -2.21
VAT1Q99536 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.24□□□□□ -2.21
VAT1Q99536 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.23□□□□□ -2.21
VAT1Q99536 RNA5SP111-201ENST00000411386 101 ntBASIC1.23□□□□□ -2.21
VAT1Q99536 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.23□□□□□ -2.21
VAT1Q99536 AL590556.1-201ENST00000423231 483 ntBASIC1.23□□□□□ -2.21
VAT1Q99536 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.23□□□□□ -2.21
VAT1Q99536 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.23□□□□□ -2.21
VAT1Q99536 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.23□□□□□ -2.21
VAT1Q99536 AC112492.4-201ENST00000456549 352 ntBASIC1.23□□□□□ -2.21
VAT1Q99536 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.23□□□□□ -2.21
VAT1Q99536 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
VAT1Q99536 AF131216.2-201ENST00000512316 564 ntBASIC1.23□□□□□ -2.21
VAT1Q99536 MIR449C-201ENST00000516047 92 ntBASIC1.23□□□□□ -2.21
VAT1Q99536 RN7SKP179-201ENST00000516126 217 ntBASIC1.23□□□□□ -2.21
VAT1Q99536 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.23□□□□□ -2.21
VAT1Q99536 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.23□□□□□ -2.21
VAT1Q99536 AC105129.3-201ENST00000605455 485 ntBASIC1.23□□□□□ -2.21
VAT1Q99536 AP000654.2-201ENST00000605633 586 ntBASIC1.23□□□□□ -2.21
VAT1Q99536 RNU6-87P-201ENST00000607561 108 ntBASIC1.23□□□□□ -2.21
VAT1Q99536 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
VAT1Q99536 Y_RNA.67-201ENST00000362870 100 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 MIR544A-201ENST00000384855 91 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 MIR558-201ENST00000384920 94 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 RNU1-78P-201ENST00000391248 165 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 RNU2-39P-201ENST00000410604 198 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 RNU2-41P-201ENST00000410991 178 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 AP1B1P2-201ENST00000416196 106 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 MTND4P20-201ENST00000424125 869 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.22□□□□□ -2.21
VAT1Q99536 AL669831.1-202ENST00000428504 417 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.22□□□□□ -2.21
VAT1Q99536 HMGN2P18-201ENST00000450680 270 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.22□□□□□ -2.21
VAT1Q99536 AC130509.1-201ENST00000464158 433 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 RPL36AP21-201ENST00000490372 323 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.22□□□□□ -2.21
VAT1Q99536 AC117522.1-201ENST00000509821 380 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 AC025465.3-201ENST00000510570 311 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.22□□□□□ -2.21
VAT1Q99536 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.22□□□□□ -2.21
VAT1Q99536 AC090821.2-201ENST00000523552 176 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.22□□□□□ -2.21
VAT1Q99536 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.22□□□□□ -2.21
VAT1Q99536 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.22□□□□□ -2.21
VAT1Q99536 AC002400.1-201ENST00000569310 726 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 MIR5697-201ENST00000578045 78 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.22□□□□□ -2.21
VAT1Q99536 AC104984.5-201ENST00000586878 94 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 AC005786.1-201ENST00000588553 154 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 AP000811.1-201ENST00000603803 651 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 MIR6715A-201ENST00000615929 79 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 AC092140.2-201ENST00000618027 521 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.22□□□□□ -2.21
VAT1Q99536 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
VAT1Q99536 RNU6-112P-201ENST00000363599 104 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 SNORD32B-201ENST00000364460 84 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 RNU4-91P-201ENST00000364778 135 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 RNU6-61P-201ENST00000365528 109 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 RNU6-1222P-201ENST00000384615 107 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 AL357139.1-201ENST00000407792 426 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 Y_RNA.608-201ENST00000410647 95 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 RPL30P13-201ENST00000418873 348 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 AL589872.1-201ENST00000426602 288 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 MED13P1-201ENST00000428342 171 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 AL591043.1-201ENST00000432461 424 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 AC000111.3-201ENST00000433478 193 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 CR769776.1-201ENST00000441254 787 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 MTCO1P44-201ENST00000441935 243 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 AL606662.1-201ENST00000445763 553 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 snoU13.9-201ENST00000458927 103 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.21□□□□□ -2.22
VAT1Q99536 AC098862.1-201ENST00000504991 413 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 AC104806.1-201ENST00000508720 308 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 MTND3P25-201ENST00000509243 135 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.21□□□□□ -2.22
VAT1Q99536 RNA5SP490-201ENST00000517141 136 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.21□□□□□ -2.22
VAT1Q99536 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.21□□□□□ -2.22
VAT1Q99536 AP003034.1-201ENST00000534621 422 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.21□□□□□ -2.22
VAT1Q99536 TRAV32-201ENST00000553993 340 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 MIR5692A1-201ENST00000580523 69 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 MIR4422-201ENST00000581938 83 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms