Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 SNORD56.1-201ENST00000362913 68 ntBASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 U8.2-201ENST00000363156 134 ntBASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 RNU6-553P-201ENST00000364047 96 ntBASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 RNU6-546P-201ENST00000383991 107 ntBASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 RNU5A-2P-201ENST00000384337 116 ntBASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 Y_RNA.576-201ENST00000384781 102 ntBASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 RPS3AP3-201ENST00000411933 242 ntBASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 USP9YP18-201ENST00000425912 695 ntBASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 TOMM20P4-201ENST00000427861 435 ntBASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 AC000111.3-201ENST00000433478 193 ntBASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 AC073614.1-201ENST00000438690 650 ntBASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 MTCO3P9-201ENST00000506989 781 ntBASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 RN7SKP287-201ENST00000516546 266 ntBASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 AC090572.1-201ENST00000519251 160 ntBASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 HSPE1P19-201ENST00000603327 295 ntBASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 AC093424.1-201ENST00000604999 338 ntBASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 AC087241.4-201ENST00000612441 480 ntBASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 AL132822.1-201ENST00000617063 513 ntBASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 AL159153.1-201ENST00000619688 317 ntBASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 RNU6-212P-201ENST00000362642 104 ntBASIC1.64□□□□□ -2.15
PKNOX2Q96KN3 SNORD115-7-201ENST00000365306 82 ntBASIC1.64□□□□□ -2.15
PKNOX2Q96KN3 BTF3L4P1-201ENST00000413813 468 ntBASIC1.64□□□□□ -2.15
PKNOX2Q96KN3 NCOR1P3-201ENST00000420479 303 ntBASIC1.64□□□□□ -2.15
PKNOX2Q96KN3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.64□□□□□ -2.15
PKNOX2Q96KN3 RPL30P7-201ENST00000479312 323 ntBASIC1.64□□□□□ -2.15
PKNOX2Q96KN3 MTCYBP40-201ENST00000509390 1135 ntBASIC1.64□□□□□ -2.15
PKNOX2Q96KN3 PTP4A1P4-201ENST00000512479 322 ntBASIC1.64□□□□□ -2.15
PKNOX2Q96KN3 AC117532.1-201ENST00000514638 323 ntBASIC1.64□□□□□ -2.15
PKNOX2Q96KN3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.64□□□□□ -2.15
PKNOX2Q96KN3 AP003034.1-201ENST00000534621 422 ntBASIC1.64□□□□□ -2.15
PKNOX2Q96KN3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.64□□□□□ -2.15
PKNOX2Q96KN3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.64□□□□□ -2.15
PKNOX2Q96KN3 AC073539.2-201ENST00000597113 165 ntBASIC1.64□□□□□ -2.15
PKNOX2Q96KN3 AC090578.1-201ENST00000604955 591 ntBASIC1.64□□□□□ -2.15
PKNOX2Q96KN3 Z82243.1-201ENST00000609432 473 ntBASIC1.64□□□□□ -2.15
PKNOX2Q96KN3 AC122133.1-201ENST00000613964 233 ntBASIC1.64□□□□□ -2.15
PKNOX2Q96KN3 AL603839.4-201ENST00000624658 1005 ntBASIC1.64□□□□□ -2.15
PKNOX2Q96KN3 AC110994.2-201ENST00000635481 492 ntBASIC1.64□□□□□ -2.15
PKNOX2Q96KN3 MTND5P17-201ENST00000418405 1603 ntBASIC1.64□□□□□ -2.15
PKNOX2Q96KN3 RNU6-78P-201ENST00000362897 107 ntBASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 RNU6-944P-201ENST00000364023 107 ntBASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 RNU1-42P-201ENST00000364033 160 ntBASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 RNY4P34-201ENST00000364779 95 ntBASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 MIR29B2-201ENST00000385055 81 ntBASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 RNA5SP100-201ENST00000410903 110 ntBASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 RNA5SP59-201ENST00000410922 110 ntBASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 RNU6-607P-201ENST00000411283 108 ntBASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 RN7SKP101-201ENST00000411376 320 ntBASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 C1DP2-201ENST00000418167 426 ntBASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 AL353752.1-201ENST00000454946 260 ntBASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 AC104806.1-201ENST00000508720 308 ntBASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 MTND3P25-201ENST00000509243 135 ntBASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 AC022616.8-201ENST00000533569 253 ntBASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 AC018630.3-201ENST00000542637 96 ntBASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 AC087883.1-201ENST00000551882 391 ntBASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 MIR3682-201ENST00000581338 84 ntBASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 AF246928.1-201ENST00000623768 87 ntBASIC1.63□□□□□ -2.15
PKNOX2Q96KN3 MIR1262-201ENST00000408276 93 ntBASIC1.62□□□□□ -2.15
PKNOX2Q96KN3 RNU2-3P-201ENST00000410144 191 ntBASIC1.62□□□□□ -2.15
PKNOX2Q96KN3 OR6C66P-201ENST00000414917 930 ntBASIC1.62□□□□□ -2.15
PKNOX2Q96KN3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.62□□□□□ -2.15
PKNOX2Q96KN3 AC015922.2-201ENST00000435593 184 ntBASIC1.62□□□□□ -2.15
PKNOX2Q96KN3 PRELID3BP1-201ENST00000457142 540 ntBASIC1.62□□□□□ -2.15
PKNOX2Q96KN3 RPL30P12-201ENST00000474666 353 ntBASIC1.62□□□□□ -2.15
PKNOX2Q96KN3 RNU6-759P-201ENST00000516740 103 ntBASIC1.62□□□□□ -2.15
PKNOX2Q96KN3 AP005660.1-201ENST00000522972 293 ntBASIC1.62□□□□□ -2.15
PKNOX2Q96KN3 AP003072.2-201ENST00000527756 676 ntBASIC1.62□□□□□ -2.15
PKNOX2Q96KN3 TRAV32-201ENST00000553993 340 ntBASIC1.62□□□□□ -2.15
PKNOX2Q96KN3 AC019288.1-201ENST00000557918 224 ntBASIC1.62□□□□□ -2.15
PKNOX2Q96KN3 MIR4648-201ENST00000580107 72 ntBASIC1.62□□□□□ -2.15
PKNOX2Q96KN3 AL136363.2-201ENST00000604173 851 ntBASIC1.62□□□□□ -2.15
PKNOX2Q96KN3 AL360219.1-201ENST00000610230 366 ntBASIC1.62□□□□□ -2.15
PKNOX2Q96KN3 AC004908.3-201ENST00000610248 625 ntBASIC1.62□□□□□ -2.15
PKNOX2Q96KN3 AC084768.2-201ENST00000622736 221 ntBASIC1.62□□□□□ -2.15
PKNOX2Q96KN3 AC091812.1-201ENST00000432235 1948 ntBASIC1.62□□□□□ -2.15
PKNOX2Q96KN3 RNU5E-7P-201ENST00000365290 117 ntBASIC1.61□□□□□ -2.15
PKNOX2Q96KN3 Y_RNA.367-201ENST00000365544 101 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms