Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 MIR1290-201ENST00000408735 78 ntBASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 YME1L1P1-201ENST00000429435 297 ntBASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 AL627311.1-201ENST00000431514 115 ntBASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 PIGFP3-201ENST00000441918 722 ntBASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 AC073910.1-201ENST00000445047 438 ntBASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 NDUFB1P2-201ENST00000449477 176 ntBASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 AP000705.1-201ENST00000454567 350 ntBASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 AC090525.1-201ENST00000479116 478 ntBASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 AC139453.3-201ENST00000493276 369 ntBASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 AC103996.1-201ENST00000555468 102 ntBASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 AC008121.1-201ENST00000603244 268 ntBASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 MIR6075-201ENST00000620782 95 ntBASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 AC116096.1-201ENST00000566804 2314 ntBASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 ZNF299P-201ENST00000406845 1804 ntBASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 Z83843.1-201ENST00000604070 3685 ntBASIC3.28□□□□□ -1.89
PDLIM2Q96JY6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 Y_RNA.214-201ENST00000364201 112 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 Y_RNA.257-201ENST00000364596 102 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 DEFB109C-201ENST00000382575 264 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 DEFB109B-201ENST00000382656 264 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 Y_RNA.447-201ENST00000384184 113 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 SNORA7.4-201ENST00000384249 137 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 SNORA51.11-201ENST00000384442 131 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 Y_RNA.526-201ENST00000384572 110 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 Y_RNA.551-201ENST00000384661 102 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 MIR592-201ENST00000384959 97 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 RNU6-700P-201ENST00000391043 107 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 SAR1AP2-201ENST00000392696 594 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 AC007098.1-201ENST00000420122 367 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 ELOCP20-201ENST00000422460 345 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 AC007560.1-201ENST00000426912 237 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 AL358232.1-201ENST00000448030 501 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 AK3P2-201ENST00000507976 429 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 AC107222.1-201ENST00000510899 637 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 RNU6-408P-201ENST00000515910 100 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 RNU6-1143P-201ENST00000516125 104 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 SNORA31.8-201ENST00000516327 108 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 RNA5SP291-201ENST00000517222 105 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 AC006023.2-201ENST00000609916 167 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 MIR8076-201ENST00000611401 83 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 AC090132.2-201ENST00000615881 347 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 AC010297.1-201ENST00000623948 149 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 MTND5P9-201ENST00000503854 1755 ntBASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM2Q96JY6 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 RNA5SP50-201ENST00000363731 107 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 RNU6-595P-201ENST00000363944 107 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 RNU6-472P-201ENST00000384299 107 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 MIR628-201ENST00000385229 95 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 HSPE1P26-201ENST00000405341 275 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 MIR1302-6-201ENST00000408466 90 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 RNU2-33P-201ENST00000410344 192 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 EIF4EP2-201ENST00000422816 654 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 AL590383.1-201ENST00000428602 75 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 AL159987.2-201ENST00000432754 307 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 KC877373.1-201ENST00000479066 408 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 RN7SL293P-201ENST00000481765 281 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 RNU2-53P-201ENST00000516257 147 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 SNORA31.19-201ENST00000517079 126 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 RNA5SP165-201ENST00000517142 115 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 AC007458.1-201ENST00000542812 373 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 AMZ2P1-203ENST00000565833 850 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 RPS29P30-201ENST00000600975 111 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 AL645944.1-201ENST00000603857 493 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 RAC1P9-201ENST00000604990 392 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 AL161629.2-201ENST00000615347 275 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 AC012314.7-201ENST00000619693 93 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 AC091953.5-201ENST00000622919 233 ntBASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms