Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 RNU11-5P-201ENST00000391216 129 ntBASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 AL627390.1-201ENST00000396055 340 ntBASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 AP000567.1-201ENST00000406413 156 ntBASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 AC090844.1-201ENST00000422019 156 ntBASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 FTH1P12-201ENST00000432137 551 ntBASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 SNRPGP5-201ENST00000456003 220 ntBASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 SNORA70.20-201ENST00000516848 126 ntBASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 AC092490.3-201ENST00000545370 572 ntBASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 BCLAF1P1-201ENST00000505813 2752 ntBASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 AC092376.2-201ENST00000622621 4116 ntBASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MS4A3Q96HJ5 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 MIR375-201ENST00000362103 64 ntBASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 SNORA70.6-201ENST00000383934 134 ntBASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 RNU6-442P-201ENST00000383968 104 ntBASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 RNA5SP284-201ENST00000384547 118 ntBASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 MIR1183-201ENST00000408856 89 ntBASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 AC023141.4-201ENST00000412031 328 ntBASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 AC087499.4-201ENST00000448505 178 ntBASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 AC112771.1-201ENST00000463581 102 ntBASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 RPS23P6-201ENST00000466136 431 ntBASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 BNIP3P1-201ENST00000547295 580 ntBASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 AC002984.1-201ENST00000591692 448 ntBASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 AC006115.2-201ENST00000596823 202 ntBASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 RNU6-86P-201ENST00000606534 107 ntBASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 FAM27D1-201ENST00000612308 341 ntBASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 OR56B2P-202ENST00000641377 2453 ntBASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.02□□□□□ -1.61
MS4A3Q96HJ5 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
MS4A3Q96HJ5 AC073346.2-201ENST00000624724 2058 ntBASIC5.01□□□□□ -1.61
MS4A3Q96HJ5 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
MS4A3Q96HJ5 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
MS4A3Q96HJ5 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
MS4A3Q96HJ5 AC093591.2-201ENST00000565254 3843 ntBASIC5.01□□□□□ -1.61
MS4A3Q96HJ5 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
MS4A3Q96HJ5 AC005005.4-201ENST00000623789 16698 ntBASIC5.01□□□□□ -1.61
MS4A3Q96HJ5 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
MS4A3Q96HJ5 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
MS4A3Q96HJ5 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
MS4A3Q96HJ5 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.01□□□□□ -1.61
MS4A3Q96HJ5 Y_RNA.205-201ENST00000364128 113 ntBASIC5.01□□□□□ -1.61
MS4A3Q96HJ5 RPS3AP2-201ENST00000407190 754 ntBASIC5.01□□□□□ -1.61
MS4A3Q96HJ5 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.01□□□□□ -1.61
MS4A3Q96HJ5 AC034105.4-201ENST00000568304 277 ntBASIC5.01□□□□□ -1.61
MS4A3Q96HJ5 MIR4260-201ENST00000583107 67 ntBASIC5.01□□□□□ -1.61
MS4A3Q96HJ5 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.01□□□□□ -1.61
MS4A3Q96HJ5 MIR6715B-201ENST00000637172 77 ntBASIC5.01□□□□□ -1.61
MS4A3Q96HJ5 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.01□□□□□ -1.61
MS4A3Q96HJ5 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
MS4A3Q96HJ5 AC104260.2-201ENST00000623551 3497 ntBASIC5□□□□□ -1.61
MS4A3Q96HJ5 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
MS4A3Q96HJ5 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
MS4A3Q96HJ5 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MS4A3Q96HJ5 AL136964.1-201ENST00000622038 2990 ntBASIC5□□□□□ -1.61
MS4A3Q96HJ5 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5□□□□□ -1.61
MS4A3Q96HJ5 AC018630.2-201ENST00000534866 2403 ntBASIC5□□□□□ -1.61
MS4A3Q96HJ5 AL159987.1-201ENST00000347911 293 ntBASIC5□□□□□ -1.61
MS4A3Q96HJ5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
MS4A3Q96HJ5 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MS4A3Q96HJ5 RPL31P63-201ENST00000422565 375 ntBASIC5□□□□□ -1.61
MS4A3Q96HJ5 RPS12P2-201ENST00000439728 269 ntBASIC5□□□□□ -1.61
MS4A3Q96HJ5 AL445665.1-202ENST00000452436 324 ntBASIC5□□□□□ -1.61
MS4A3Q96HJ5 RNA5SP230-201ENST00000517039 122 ntBASIC5□□□□□ -1.61
MS4A3Q96HJ5 AC021678.3-201ENST00000517893 476 ntBASIC5□□□□□ -1.61
MS4A3Q96HJ5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC5□□□□□ -1.61
MS4A3Q96HJ5 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5□□□□□ -1.61
MS4A3Q96HJ5 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms