| PGAP3 | Q96FM1 | AC083973.1-205 | ENST00000518994 | 601 nt | TSL 2 BASIC | 2.41 | □□□□□ -2.02 | | |
| PGAP3 | Q96FM1 | CENPUP1-201 | ENST00000526649 | 1202 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| PGAP3 | Q96FM1 | VN1R80P-201 | ENST00000597126 | 338 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| PGAP3 | Q96FM1 | AC025165.5-201 | ENST00000602802 | 578 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| PGAP3 | Q96FM1 | AC107304.1-201 | ENST00000604229 | 296 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| PGAP3 | Q96FM1 | RNU6-85P-201 | ENST00000605989 | 107 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| PGAP3 | Q96FM1 | AC131280.1-202 | ENST00000624067 | 4211 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| PGAP3 | Q96FM1 | XPO4-202 | ENST00000400602 | 9884 nt | APPRIS ALT1 TSL 5 BASIC | 2.41 | □□□□□ -2.02 | | |
| PGAP3 | Q96FM1 | FAR1-204 | ENST00000532502 | 5820 nt | TSL 2 BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | APCS-201 | ENST00000255040 | 926 nt | APPRIS P1 TSL 1 (best) BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | RNU6-428P-201 | ENST00000362942 | 107 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | SNORA3A-201 | ENST00000364113 | 130 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | U3.13-201 | ENST00000364804 | 214 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | RNU4-66P-201 | ENST00000365199 | 138 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | SNORA25B-201 | ENST00000365507 | 128 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | CALM2P3-201 | ENST00000400429 | 449 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | RNA5SP181-201 | ENST00000410246 | 98 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | RNA5SP270-201 | ENST00000411361 | 118 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AC009411.1-202 | ENST00000412424 | 548 nt | TSL 4 BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AL136369.1-201 | ENST00000437825 | 244 nt | TSL 5 BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | USP9YP8-201 | ENST00000441913 | 500 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AC007879.3-202 | ENST00000448786 | 823 nt | TSL 1 (best) BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AC009646.1-201 | ENST00000510455 | 318 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | HMGB3P3-201 | ENST00000510526 | 400 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | SNORA14.1-201 | ENST00000516113 | 141 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | RNA5SP82-201 | ENST00000516707 | 92 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | PSMA4-205 | ENST00000558281 | 773 nt | TSL 3 BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AC009127.3-201 | ENST00000570531 | 403 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AC019183.1-201 | ENST00000580524 | 505 nt | TSL 3 BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AC087241.4-201 | ENST00000612441 | 480 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AC015540.1-201 | ENST00000615828 | 501 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | MIR6766-201 | ENST00000622641 | 72 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | Clostridiales-1.2-201 | ENST00000636724 | 160 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AGTPBP1-205 | ENST00000376083 | 4208 nt | APPRIS P1 TSL 1 (best) BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | CFHR4-202 | ENST00000367416 | 2178 nt | APPRIS P1 TSL 2 BASIC | 2.4 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | SIRT1-203 | ENST00000406900 | 3295 nt | TSL 2 BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | LINC01938-201 | ENST00000521341 | 1864 nt | TSL 2 BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | RNU6-827P-201 | ENST00000365553 | 106 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AL591034.2-201 | ENST00000402839 | 359 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | RNA5SP508-201 | ENST00000411327 | 119 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | POLHP1-201 | ENST00000411806 | 470 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AL136369.2-201 | ENST00000420825 | 537 nt | TSL 3 BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | USP9YP18-201 | ENST00000425912 | 695 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | RPS15AP28-201 | ENST00000435088 | 386 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | SEPT14P3-201 | ENST00000439401 | 183 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AL732372.2-207 | ENST00000445840 | 183 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | IFNA11P-201 | ENST00000446352 | 526 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | SEPT14P2-201 | ENST00000453405 | 183 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AL136987.2-201 | ENST00000457321 | 684 nt | TSL 3 BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | SEPT14P4-201 | ENST00000513445 | 186 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | RNU6-835P-201 | ENST00000516974 | 104 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AC011257.1-201 | ENST00000519048 | 281 nt | TSL 3 BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | FO082796.1-201 | ENST00000523795 | 183 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AC005909.1-201 | ENST00000577835 | 755 nt | TSL 3 BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AC092747.3-201 | ENST00000603769 | 301 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AL356157.2-201 | ENST00000605122 | 111 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AC013412.1-201 | ENST00000610687 | 192 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AL161423.1-201 | ENST00000613700 | 262 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AC103705.1-201 | ENST00000619013 | 241 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | MIR203B-201 | ENST00000636080 | 86 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AC003984.1-201 | ENST00000450977 | 4104 nt | TSL 1 (best) BASIC | 2.39 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | RNU1-23P-201 | ENST00000363361 | 144 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | RNU6-1141P-201 | ENST00000364520 | 107 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | RNU6-38P-201 | ENST00000384085 | 107 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | RNU6-1274P-201 | ENST00000384557 | 107 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | TRAV40-201 | ENST00000390467 | 317 nt | APPRIS P1 BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AF274854.1-201 | ENST00000413236 | 615 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AC073626.1-201 | ENST00000415146 | 582 nt | TSL 4 BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AL445123.1-201 | ENST00000422023 | 446 nt | TSL 2 BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | LINC02532-205 | ENST00000430094 | 628 nt | TSL 5 BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | DLGAP5P1-201 | ENST00000430307 | 464 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | MTND3P21-201 | ENST00000433774 | 331 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | TLK1-206 | ENST00000434911 | 2156 nt | TSL 2 BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | LINC02264-201 | ENST00000442020 | 576 nt | TSL 3 BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | RPL32P28-201 | ENST00000443577 | 397 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | MCHR2-AS1-203 | ENST00000451220 | 429 nt | TSL 3 BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | RNU6-333P-201 | ENST00000459117 | 107 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AC124290.1-202 | ENST00000523342 | 387 nt | TSL 3 BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AC090124.2-201 | ENST00000527727 | 563 nt | TSL 4 BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AC009120.5-201 | ENST00000561669 | 475 nt | TSL 5 BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AL160408.5-201 | ENST00000607759 | 526 nt | TSL 4 BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AC093783.1-201 | ENST00000612976 | 329 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AC099654.12-201 | ENST00000639868 | 649 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | CEP57L1-223 | ENST00000523787 | 2522 nt | APPRIS ALT2 TSL 5 BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | PRKACB-204 | ENST00000370685 | 4481 nt | APPRIS P4 TSL 1 (best) BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | RMDN2-203 | ENST00000402091 | 1973 nt | TSL 2 BASIC | 2.38 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | TTC6-201 | ENST00000267368 | 1681 nt | TSL 5 BASIC | 2.37 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | FGF7-201 | ENST00000267843 | 5467 nt | APPRIS P1 TSL 1 (best) BASIC | 2.37 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | NAALADL2-203 | ENST00000454872 | 9865 nt | APPRIS P1 TSL 1 (best) BASIC | 2.37 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | snoU2_19.1-201 | ENST00000362361 | 80 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | RNU6-1285P-201 | ENST00000363480 | 105 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | RNU4-75P-201 | ENST00000364621 | 146 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | RNU6-648P-201 | ENST00000410190 | 107 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | RNU4-53P-201 | ENST00000410828 | 140 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | RPS15AP10-201 | ENST00000432472 | 382 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AL122017.1-201 | ENST00000435858 | 784 nt | TSL 2 BASIC | 2.37 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AL353752.1-201 | ENST00000454946 | 260 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | Y_RNA.654-201 | ENST00000497848 | 106 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AC019235.1-201 | ENST00000503847 | 207 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| PGAP3 | Q96FM1 | AC022447.4-201 | ENST00000504053 | 364 nt | BASIC | 2.37 | □□□□□ -2.03 | | |