Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HPS1Q92902 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HPS1Q92902 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HPS1Q92902 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
HPS1Q92902 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
HPS1Q92902 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HPS1Q92902 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HPS1Q92902 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HPS1Q92902 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HPS1Q92902 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HPS1Q92902 SNORD114-7-201ENST00000362520 77 ntBASIC4.47□□□□□ -1.69
HPS1Q92902 RNU1-20P-201ENST00000363314 162 ntBASIC4.47□□□□□ -1.69
HPS1Q92902 RNU1-64P-201ENST00000365443 163 ntBASIC4.47□□□□□ -1.69
HPS1Q92902 RNU1-73P-201ENST00000383971 164 ntBASIC4.47□□□□□ -1.69
HPS1Q92902 RNU6-629P-201ENST00000384061 103 ntBASIC4.47□□□□□ -1.69
HPS1Q92902 MIR1263-201ENST00000408324 86 ntBASIC4.47□□□□□ -1.69
HPS1Q92902 RNA5SP504-201ENST00000410676 117 ntBASIC4.47□□□□□ -1.69
HPS1Q92902 EIF4A1P3-201ENST00000411521 244 ntBASIC4.47□□□□□ -1.69
HPS1Q92902 AL135786.1-201ENST00000415892 214 ntBASIC4.47□□□□□ -1.69
HPS1Q92902 AL021397.1-201ENST00000451806 248 ntBASIC4.47□□□□□ -1.69
HPS1Q92902 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.47□□□□□ -1.69
HPS1Q92902 RNA5SP228-201ENST00000516232 133 ntBASIC4.47□□□□□ -1.69
HPS1Q92902 RNA5SP153-201ENST00000516498 76 ntBASIC4.47□□□□□ -1.69
HPS1Q92902 RNA5SP395-201ENST00000516567 118 ntBASIC4.47□□□□□ -1.69
HPS1Q92902 RNU6-158P-201ENST00000517104 100 ntBASIC4.47□□□□□ -1.69
HPS1Q92902 ATP5J2P6-201ENST00000565203 266 ntBASIC4.47□□□□□ -1.69
HPS1Q92902 AL021707.8-201ENST00000609428 183 ntBASIC4.47□□□□□ -1.69
HPS1Q92902 FTX_3.1-201ENST00000610451 147 ntBASIC4.47□□□□□ -1.69
HPS1Q92902 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.47□□□□□ -1.69
HPS1Q92902 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.47□□□□□ -1.69
HPS1Q92902 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HPS1Q92902 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.47□□□□□ -1.69
HPS1Q92902 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
HPS1Q92902 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
HPS1Q92902 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HPS1Q92902 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.46□□□□□ -1.7
HPS1Q92902 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HPS1Q92902 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HPS1Q92902 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.46□□□□□ -1.7
HPS1Q92902 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HPS1Q92902 RNU1-108P-201ENST00000362556 161 ntBASIC4.46□□□□□ -1.7
HPS1Q92902 Y_RNA.49-201ENST00000362714 112 ntBASIC4.46□□□□□ -1.7
HPS1Q92902 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HPS1Q92902 MIR589-201ENST00000385238 99 ntBASIC4.46□□□□□ -1.7
HPS1Q92902 CBX3P9-201ENST00000402326 552 ntBASIC4.46□□□□□ -1.7
HPS1Q92902 RPL23AP48-201ENST00000406913 488 ntBASIC4.46□□□□□ -1.7
HPS1Q92902 AC004866.1-201ENST00000411748 78 ntBASIC4.46□□□□□ -1.7
HPS1Q92902 AC093162.1-201ENST00000419682 124 ntBASIC4.46□□□□□ -1.7
HPS1Q92902 RPS29P10-201ENST00000439197 166 ntBASIC4.46□□□□□ -1.7
HPS1Q92902 RPL37P4-201ENST00000448908 268 ntBASIC4.46□□□□□ -1.7
HPS1Q92902 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.46□□□□□ -1.7
HPS1Q92902 RPL39P34-201ENST00000477141 156 ntBASIC4.46□□□□□ -1.7
HPS1Q92902 RPS29P2-201ENST00000479278 136 ntBASIC4.46□□□□□ -1.7
HPS1Q92902 SNORA70.16-201ENST00000516390 95 ntBASIC4.46□□□□□ -1.7
HPS1Q92902 RNU1-104P-201ENST00000517280 175 ntBASIC4.46□□□□□ -1.7
HPS1Q92902 AC025281.1-201ENST00000567026 265 ntBASIC4.46□□□□□ -1.7
HPS1Q92902 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.46□□□□□ -1.7
HPS1Q92902 MIR3923-201ENST00000579521 83 ntBASIC4.46□□□□□ -1.7
HPS1Q92902 AC090897.2-201ENST00000581715 130 ntBASIC4.46□□□□□ -1.7
HPS1Q92902 AL591034.3-201ENST00000605511 685 ntBASIC4.46□□□□□ -1.7
HPS1Q92902 AL021997.2-201ENST00000615674 271 ntBASIC4.46□□□□□ -1.7
HPS1Q92902 AC140113.4-201ENST00000622087 222 ntBASIC4.46□□□□□ -1.7
HPS1Q92902 BMS1P21-201ENST00000634565 365 ntBASIC4.46□□□□□ -1.7
HPS1Q92902 SNORD98-201ENST00000636377 67 ntBASIC4.46□□□□□ -1.7
HPS1Q92902 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HPS1Q92902 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HPS1Q92902 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HPS1Q92902 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HPS1Q92902 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HPS1Q92902 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.46□□□□□ -1.7
HPS1Q92902 AC107027.3-201ENST00000565095 3473 ntBASIC4.45□□□□□ -1.7
HPS1Q92902 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.45□□□□□ -1.7
HPS1Q92902 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HPS1Q92902 RNA5SP515-201ENST00000364570 118 ntBASIC4.45□□□□□ -1.7
HPS1Q92902 RNU6-487P-201ENST00000365430 104 ntBASIC4.45□□□□□ -1.7
HPS1Q92902 RNU6-1323P-201ENST00000384025 107 ntBASIC4.45□□□□□ -1.7
HPS1Q92902 RNU1-106P-201ENST00000384382 164 ntBASIC4.45□□□□□ -1.7
HPS1Q92902 RNA5SP136-201ENST00000410906 107 ntBASIC4.45□□□□□ -1.7
HPS1Q92902 RPL37P18-201ENST00000411602 243 ntBASIC4.45□□□□□ -1.7
HPS1Q92902 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.45□□□□□ -1.7
HPS1Q92902 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.45□□□□□ -1.7
HPS1Q92902 AL445687.1-201ENST00000439946 251 ntBASIC4.45□□□□□ -1.7
HPS1Q92902 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.45□□□□□ -1.7
HPS1Q92902 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.45□□□□□ -1.7
HPS1Q92902 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.45□□□□□ -1.7
HPS1Q92902 MRPS36P2-201ENST00000512569 299 ntBASIC4.45□□□□□ -1.7
HPS1Q92902 IGKV2D-19-201ENST00000523346 262 ntBASIC4.45□□□□□ -1.7
HPS1Q92902 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.45□□□□□ -1.7
HPS1Q92902 MTND6P33-201ENST00000571794 183 ntBASIC4.45□□□□□ -1.7
HPS1Q92902 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.45□□□□□ -1.7
HPS1Q92902 AL138880.2-201ENST00000616214 239 ntBASIC4.45□□□□□ -1.7
HPS1Q92902 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
HPS1Q92902 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HPS1Q92902 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HPS1Q92902 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.45□□□□□ -1.7
HPS1Q92902 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.44□□□□□ -1.7
HPS1Q92902 AC015813.6-201ENST00000624409 5808 ntBASIC4.44□□□□□ -1.7
HPS1Q92902 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.44□□□□□ -1.7
HPS1Q92902 Y_RNA.52-201ENST00000362760 96 ntBASIC4.44□□□□□ -1.7
HPS1Q92902 RNU6-674P-201ENST00000363831 107 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms