Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AL161912.2-201ENST00000565707 3007 ntBASIC5.13□□□□□ -1.59
NKX2-3Q8TAU0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-3Q8TAU0 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
NKX2-3Q8TAU0 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
NKX2-3Q8TAU0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-3Q8TAU0 MIR372-201ENST00000362225 67 ntBASIC5.13□□□□□ -1.59
NKX2-3Q8TAU0 SNORA71.3-201ENST00000362582 128 ntBASIC5.13□□□□□ -1.59
NKX2-3Q8TAU0 RNU1-20P-201ENST00000363314 162 ntBASIC5.13□□□□□ -1.59
NKX2-3Q8TAU0 RNU6-1131P-201ENST00000364955 107 ntBASIC5.13□□□□□ -1.59
NKX2-3Q8TAU0 Y_RNA.368-201ENST00000365547 113 ntBASIC5.13□□□□□ -1.59
NKX2-3Q8TAU0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.13□□□□□ -1.59
NKX2-3Q8TAU0 AL117339.2-201ENST00000430475 180 ntBASIC5.13□□□□□ -1.59
NKX2-3Q8TAU0 snoMBII-202.2-201ENST00000517263 86 ntBASIC5.13□□□□□ -1.59
NKX2-3Q8TAU0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.13□□□□□ -1.59
NKX2-3Q8TAU0 AC140113.4-201ENST00000622087 222 ntBASIC5.13□□□□□ -1.59
NKX2-3Q8TAU0 AC006065.5-201ENST00000623427 349 ntBASIC5.13□□□□□ -1.59
NKX2-3Q8TAU0 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
NKX2-3Q8TAU0 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
NKX2-3Q8TAU0 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-3Q8TAU0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.13□□□□□ -1.59
NKX2-3Q8TAU0 MAPK10-320ENST00000641462 6696 ntBASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 RNU6-766P-201ENST00000362478 107 ntBASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 RNU6-1205P-201ENST00000363625 106 ntBASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 RNU6-647P-201ENST00000364243 107 ntBASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 RNU6-144P-201ENST00000383951 107 ntBASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 RNU6-49P-201ENST00000384256 107 ntBASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 MIRLET7F2-201ENST00000385277 83 ntBASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 MIR1911-201ENST00000410783 80 ntBASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 AL157831.1-201ENST00000426134 473 ntBASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 AC007215.1-201ENST00000464893 276 ntBASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 AC091179.3-201ENST00000474761 144 ntBASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 AC108145.1-201ENST00000503770 153 ntBASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 AC091178.2-201ENST00000584401 117 ntBASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 AC120024.3-201ENST00000603167 156 ntBASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-3Q8TAU0 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 MAPK10-349ENST00000641767 3661 ntBASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 MIR548A1-201ENST00000385041 97 ntBASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 MIR483-201ENST00000385070 76 ntBASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 RNU6-554P-201ENST00000410466 106 ntBASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 RN7SKP61-201ENST00000410642 295 ntBASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 UBE2CP3-201ENST00000502715 450 ntBASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 RNA5SP49-201ENST00000516450 115 ntBASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 MIR4724-201ENST00000579485 89 ntBASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 AL356575.1-201ENST00000603008 283 ntBASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 AC062037.1-201ENST00000605302 128 ntBASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 uc_338.13-201ENST00000618243 179 ntBASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 AP001273.1-201ENST00000624493 3152 ntBASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 Z73965.1-201ENST00000623412 2297 ntBASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-3Q8TAU0 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 AC107068.1-201ENST00000563286 4218 ntBASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 DEFB108F-201ENST00000344638 222 ntBASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 RNU1-62P-201ENST00000362599 164 ntBASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 U8.1-201ENST00000362843 134 ntBASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 Y_RNA.281-201ENST00000364774 94 ntBASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 U6atac.2-201ENST00000408644 118 ntBASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 RPS3AP1-201ENST00000413190 320 ntBASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 RPS26P45-201ENST00000471748 340 ntBASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 RNA5SP497-201ENST00000516081 97 ntBASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 RNA5SP519-201ENST00000516480 119 ntBASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 HSPE1P4-201ENST00000550617 308 ntBASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 AC021231.3-201ENST00000558497 370 ntBASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 RN7SL600P-201ENST00000581811 299 ntBASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 AC053481.4-201ENST00000583164 216 ntBASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-3Q8TAU0 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms