Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 TOMM20P2-201ENST00000540082 421 ntBASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 AC133485.4-201ENST00000561835 220 ntBASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 AC138907.4-201ENST00000570107 226 ntBASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 AC099778.2-201ENST00000610904 211 ntBASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 PCGEM1.1-201ENST00000613431 131 ntBASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 TCL6_2.1-201ENST00000615162 119 ntBASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 DHX9P1-201ENST00000436565 3076 ntBASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 AC139713.2-215ENST00000641428 5037 ntBASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 SNORD45.3-201ENST00000363836 72 ntBASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 Y_RNA.280-201ENST00000364765 112 ntBASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 RNA5SP201-201ENST00000410316 124 ntBASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 Y_RNA.622-201ENST00000411091 108 ntBASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 Y_RNA.630-201ENST00000411370 108 ntBASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 HSPE1P21-201ENST00000438283 308 ntBASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 RPL12P3-201ENST00000440080 396 ntBASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 AL158147.1-201ENST00000443970 75 ntBASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 HMGN2P21-201ENST00000447764 270 ntBASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 SNORA70.12-201ENST00000516084 153 ntBASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 MIR3667-201ENST00000581025 74 ntBASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 MIR4436B2-201ENST00000581415 91 ntBASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 MIR5006-201ENST00000583027 110 ntBASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 MIR4436B1-201ENST00000583272 91 ntBASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC116Q8IYX3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 RNU1-75P-201ENST00000347264 129 ntBASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 Y_RNA.35-201ENST00000362601 101 ntBASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 RN7SKP103-201ENST00000363848 320 ntBASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 RNU6-1336P-201ENST00000383886 109 ntBASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 SNORD116-21-201ENST00000384507 92 ntBASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 AL590762.4-201ENST00000425885 253 ntBASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 AC245047.4-201ENST00000433189 144 ntBASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 MTCO1P44-201ENST00000441935 243 ntBASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 Z75741.1-201ENST00000446793 314 ntBASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 AC108751.2-201ENST00000469993 231 ntBASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 RNU6-1061P-201ENST00000516530 99 ntBASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 MIR378D2-201ENST00000580636 98 ntBASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 AC024220.1-201ENST00000603675 484 ntBASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 MIR6820-201ENST00000611508 62 ntBASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 AC010733.2-201ENST00000589496 5702 ntBASIC4.41□□□□□ -1.7
CCDC116Q8IYX3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC116Q8IYX3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC116Q8IYX3 AC008555.8-201ENST00000623602 2168 ntBASIC4.4□□□□□ -1.7
CCDC116Q8IYX3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.4□□□□□ -1.7
CCDC116Q8IYX3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.4□□□□□ -1.7
CCDC116Q8IYX3 U8.1-201ENST00000362843 134 ntBASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 U8.7-201ENST00000364940 136 ntBASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 SNORA79-201ENST00000408376 140 ntBASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 RN7SKP125-201ENST00000410481 302 ntBASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 AL691449.1-201ENST00000426570 421 ntBASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 AL365496.1-201ENST00000426885 215 ntBASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 Y_RNA.651-201ENST00000459380 103 ntBASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 AC117454.1-201ENST00000491120 168 ntBASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 AC105137.2-201ENST00000569073 466 ntBASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 AL391358.1-201ENST00000605342 190 ntBASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 ARF4P1-201ENST00000605447 541 ntBASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 MIR548AY-201ENST00000617669 107 ntBASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC116Q8IYX3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms