Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AL161651.1-201ENST00000440882 223 ntBASIC4.58□□□□□ -1.68
TRIM50Q86XT4 RPS29P26-201ENST00000477483 171 ntBASIC4.58□□□□□ -1.68
TRIM50Q86XT4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM50Q86XT4 HIGD1AP1-201ENST00000550979 275 ntBASIC4.58□□□□□ -1.68
TRIM50Q86XT4 MIR4429-201ENST00000580105 73 ntBASIC4.58□□□□□ -1.68
TRIM50Q86XT4 MIR3145-201ENST00000580727 82 ntBASIC4.58□□□□□ -1.68
TRIM50Q86XT4 AL606490.9-201ENST00000603331 271 ntBASIC4.58□□□□□ -1.68
TRIM50Q86XT4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM50Q86XT4 CUL1P1-201ENST00000509510 2425 ntBASIC4.58□□□□□ -1.68
TRIM50Q86XT4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM50Q86XT4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM50Q86XT4 AL672296.1-201ENST00000427780 2158 ntBASIC4.58□□□□□ -1.68
TRIM50Q86XT4 AL109809.4-201ENST00000603520 2185 ntBASIC4.58□□□□□ -1.68
TRIM50Q86XT4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM50Q86XT4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM50Q86XT4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
TRIM50Q86XT4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM50Q86XT4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
TRIM50Q86XT4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM50Q86XT4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM50Q86XT4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM50Q86XT4 BX322639.1-202ENST00000423987 2213 ntBASIC4.57□□□□□ -1.68
TRIM50Q86XT4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM50Q86XT4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM50Q86XT4 Y_RNA.101-201ENST00000363154 102 ntBASIC4.57□□□□□ -1.68
TRIM50Q86XT4 RNU4-80P-201ENST00000363200 141 ntBASIC4.57□□□□□ -1.68
TRIM50Q86XT4 Y_RNA.240-201ENST00000364469 95 ntBASIC4.57□□□□□ -1.68
TRIM50Q86XT4 RNU6-487P-201ENST00000365430 104 ntBASIC4.57□□□□□ -1.68
TRIM50Q86XT4 MIR23B-201ENST00000384832 97 ntBASIC4.57□□□□□ -1.68
TRIM50Q86XT4 MIR548I2-201ENST00000408348 149 ntBASIC4.57□□□□□ -1.68
TRIM50Q86XT4 RN7SKP202-201ENST00000410439 330 ntBASIC4.57□□□□□ -1.68
TRIM50Q86XT4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM50Q86XT4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM50Q86XT4 RPL21P129-201ENST00000491732 478 ntBASIC4.57□□□□□ -1.68
TRIM50Q86XT4 CYCSP23-201ENST00000519781 313 ntBASIC4.57□□□□□ -1.68
TRIM50Q86XT4 IFITM8P-201ENST00000522529 394 ntBASIC4.57□□□□□ -1.68
TRIM50Q86XT4 MRPS18CP4-201ENST00000535821 231 ntBASIC4.57□□□□□ -1.68
TRIM50Q86XT4 MIR6868-201ENST00000611215 58 ntBASIC4.57□□□□□ -1.68
TRIM50Q86XT4 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM50Q86XT4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TRIM50Q86XT4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM50Q86XT4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM50Q86XT4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM50Q86XT4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM50Q86XT4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM50Q86XT4 AC092593.1-201ENST00000515413 1815 ntBASIC4.56□□□□□ -1.68
TRIM50Q86XT4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
TRIM50Q86XT4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM50Q86XT4 RNU6-727P-201ENST00000363592 107 ntBASIC4.56□□□□□ -1.68
TRIM50Q86XT4 RNU6-793P-201ENST00000384233 104 ntBASIC4.56□□□□□ -1.68
TRIM50Q86XT4 MIR554-201ENST00000384874 96 ntBASIC4.56□□□□□ -1.68
TRIM50Q86XT4 RAB28P5-201ENST00000427490 651 ntBASIC4.56□□□□□ -1.68
TRIM50Q86XT4 AL445584.1-201ENST00000431451 330 ntBASIC4.56□□□□□ -1.68
TRIM50Q86XT4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM50Q86XT4 snoU13.28-201ENST00000459235 104 ntBASIC4.56□□□□□ -1.68
TRIM50Q86XT4 AC091179.3-201ENST00000474761 144 ntBASIC4.56□□□□□ -1.68
TRIM50Q86XT4 AC074133.1-201ENST00000515696 183 ntBASIC4.56□□□□□ -1.68
TRIM50Q86XT4 MTND5P41-201ENST00000517498 206 ntBASIC4.56□□□□□ -1.68
TRIM50Q86XT4 AC115990.1-201ENST00000526957 301 ntBASIC4.56□□□□□ -1.68
TRIM50Q86XT4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM50Q86XT4 MIR4308-201ENST00000580634 81 ntBASIC4.56□□□□□ -1.68
TRIM50Q86XT4 MIR3609-201ENST00000582661 80 ntBASIC4.56□□□□□ -1.68
TRIM50Q86XT4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM50Q86XT4 MIR92B-201ENST00000607575 96 ntBASIC4.56□□□□□ -1.68
TRIM50Q86XT4 AC004467.1-201ENST00000615678 330 ntBASIC4.56□□□□□ -1.68
TRIM50Q86XT4 SNORD98-201ENST00000636377 67 ntBASIC4.56□□□□□ -1.68
TRIM50Q86XT4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
TRIM50Q86XT4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.56□□□□□ -1.68
TRIM50Q86XT4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM50Q86XT4 AC004944.1-201ENST00000517807 3059 ntBASIC4.56□□□□□ -1.68
TRIM50Q86XT4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM50Q86XT4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM50Q86XT4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
TRIM50Q86XT4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM50Q86XT4 AC016588.2-201ENST00000632484 3021 ntBASIC4.55□□□□□ -1.68
TRIM50Q86XT4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
TRIM50Q86XT4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM50Q86XT4 Y_RNA.217-201ENST00000364214 105 ntBASIC4.55□□□□□ -1.68
TRIM50Q86XT4 MIR208B-201ENST00000401172 77 ntBASIC4.55□□□□□ -1.68
TRIM50Q86XT4 AL133475.1-201ENST00000404414 305 ntBASIC4.55□□□□□ -1.68
TRIM50Q86XT4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.55□□□□□ -1.68
TRIM50Q86XT4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM50Q86XT4 Y_RNA.641-201ENST00000459414 105 ntBASIC4.55□□□□□ -1.68
TRIM50Q86XT4 AL121594.1-201ENST00000475906 575 ntBASIC4.55□□□□□ -1.68
TRIM50Q86XT4 RPS4XP13-201ENST00000483219 789 ntBASIC4.55□□□□□ -1.68
TRIM50Q86XT4 RNU6-1219P-201ENST00000516143 112 ntBASIC4.55□□□□□ -1.68
TRIM50Q86XT4 SNORA67.7-201ENST00000516664 135 ntBASIC4.55□□□□□ -1.68
TRIM50Q86XT4 AC100770.1-201ENST00000532310 322 ntBASIC4.55□□□□□ -1.68
TRIM50Q86XT4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM50Q86XT4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM50Q86XT4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM50Q86XT4 AC006133.1-201ENST00000617106 264 ntBASIC4.55□□□□□ -1.68
TRIM50Q86XT4 AC091932.3-201ENST00000624223 323 ntBASIC4.55□□□□□ -1.68
TRIM50Q86XT4 AC034229.5-201ENST00000624258 185 ntBASIC4.55□□□□□ -1.68
TRIM50Q86XT4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM50Q86XT4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM50Q86XT4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM50Q86XT4 Z82217.1-201ENST00000625157 8149 ntBASIC4.54□□□□□ -1.68
TRIM50Q86XT4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM50Q86XT4 AC099654.7-201ENST00000635788 2127 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 234.2 ms