Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.06□□□□□ -2.4
CSPG4Q6UVK1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.06□□□□□ -2.4
CSPG4Q6UVK1 HMGN1P13-201ENST00000505795 138 ntBASIC0.06□□□□□ -2.4
CSPG4Q6UVK1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.06□□□□□ -2.4
CSPG4Q6UVK1 ACA59.2-201ENST00000517061 156 ntBASIC0.06□□□□□ -2.4
CSPG4Q6UVK1 AC012213.3-201ENST00000577199 777 ntBASIC0.06□□□□□ -2.4
CSPG4Q6UVK1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.06□□□□□ -2.4
CSPG4Q6UVK1 AC092106.3-201ENST00000611308 722 ntBASIC0.06□□□□□ -2.4
CSPG4Q6UVK1 AC104465.1-201ENST00000611365 139 ntBASIC0.06□□□□□ -2.4
CSPG4Q6UVK1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.06□□□□□ -2.4
CSPG4Q6UVK1 SNORD44.1-201ENST00000363202 61 ntBASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 SNORD89-201ENST00000390981 114 ntBASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 BET1P1-201ENST00000482276 359 ntBASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 PDCD5P2-201ENST00000507570 312 ntBASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 BNIP3P24-201ENST00000593398 557 ntBASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 AC100810.6-201ENST00000638068 285 ntBASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 RNU6-862P-201ENST00000362804 105 ntBASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 SNORD114-31-201ENST00000363219 75 ntBASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 RNU6-1019P-201ENST00000364424 107 ntBASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 RNU6-546P-201ENST00000383991 107 ntBASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 RNU6-1176P-201ENST00000390955 107 ntBASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 CCDC58P2-201ENST00000417131 366 ntBASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 AC244505.3-201ENST00000454598 187 ntBASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 SUMO1P1-201ENST00000497904 306 ntBASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 HMGB1P33-201ENST00000563485 527 ntBASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 AC093788.1-201ENST00000609356 927 ntBASIC0.05□□□□□ -2.4
CSPG4Q6UVK1 AC090625.1-201ENST00000357130 210 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 RNU6-302P-201ENST00000365249 107 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 RNU6-1064P-201ENST00000410626 104 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 ELOCP14-201ENST00000428070 331 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 ELOCP7-201ENST00000439968 331 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 GAPDHP17-201ENST00000449858 1001 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 RNVU1-2-201ENST00000516326 135 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 RNU4-18P-201ENST00000516751 149 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 RNU6-667P-201ENST00000517186 102 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 MIR5094-201ENST00000578766 85 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 MIR3167-201ENST00000579623 85 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 AC091057.3-201ENST00000602684 733 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 Y_RNA.804-201ENST00000615262 101 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 AC010133.1-201ENST00000615809 842 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 AL590240.4-201ENST00000616908 390 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 AC130454.1-201ENST00000622948 401 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 MIR4275-201ENST00000636486 87 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 AL590396.4-201ENST00000636779 956 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 MIR371B-201ENST00000638082 66 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 Y_RNA.100-201ENST00000363141 102 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 RNU6-778P-201ENST00000363269 103 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 Y_RNA.447-201ENST00000384184 113 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 RNU6-110P-201ENST00000384508 104 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 DHFRP6-201ENST00000401776 268 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 AC008267.5-201ENST00000424928 265 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 AL669831.1-202ENST00000428504 417 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 GPM6BP2-201ENST00000432046 144 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 MTND2P4-201ENST00000445034 1004 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 GPM6BP1-201ENST00000446387 144 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 AL096829.2-201ENST00000446582 742 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 RPS26P48-201ENST00000491713 339 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 RN7SKP256-201ENST00000517201 314 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 AC026371.1-201ENST00000551867 419 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 AC105148.1-201ENST00000604961 409 ntBASIC0.04□□□□□ -2.4
CSPG4Q6UVK1 RNA5SP205-201ENST00000364653 136 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 SNORD49B-201ENST00000365172 72 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 RNU6-1327P-201ENST00000365302 105 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 Y_RNA.548-201ENST00000384656 105 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 Y_RNA.551-201ENST00000384661 102 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 MIR942-201ENST00000401111 86 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 RNU2-28P-201ENST00000410457 189 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 RPL22P18-201ENST00000417197 377 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 PPP1R11P2-201ENST00000423543 382 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 SNX2P2-201ENST00000424553 323 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 OR6C5P-201ENST00000452388 923 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 AP001324.2-201ENST00000461163 319 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 AC048334.1-201ENST00000477975 159 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 RNU6-197P-201ENST00000516680 100 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 RNU6-678P-201ENST00000516832 109 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 LARP7P2-201ENST00000575306 125 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 MIR378F-201ENST00000578143 78 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 AC126365.2-201ENST00000580630 379 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 MIR3136-201ENST00000583498 78 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms