Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 AC008267.5-201ENST00000424928 265 ntBASIC2.75□□□□□ -1.97
CCDC30Q5VVM6 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC30Q5VVM6 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC30Q5VVM6 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC30Q5VVM6 AC140059.1-201ENST00000489238 361 ntBASIC2.75□□□□□ -1.97
CCDC30Q5VVM6 CKS1BP2-201ENST00000497342 240 ntBASIC2.75□□□□□ -1.97
CCDC30Q5VVM6 CCDC34P1-201ENST00000507441 517 ntBASIC2.75□□□□□ -1.97
CCDC30Q5VVM6 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC30Q5VVM6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC30Q5VVM6 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC30Q5VVM6 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC30Q5VVM6 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.75□□□□□ -1.97
CCDC30Q5VVM6 APOOP1-201ENST00000604695 592 ntBASIC2.75□□□□□ -1.97
CCDC30Q5VVM6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.75□□□□□ -1.97
CCDC30Q5VVM6 AC008121.3-201ENST00000618726 433 ntBASIC2.75□□□□□ -1.97
CCDC30Q5VVM6 MIR219B-201ENST00000637023 88 ntBASIC2.75□□□□□ -1.97
CCDC30Q5VVM6 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC30Q5VVM6 SNORD37.1-201ENST00000390968 65 ntBASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 AL023284.1-201ENST00000403956 276 ntBASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 RNU6-648P-201ENST00000410190 107 ntBASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 RNU6-1245P-201ENST00000411130 106 ntBASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 USP9YP27-201ENST00000418455 438 ntBASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 AL161788.1-201ENST00000441805 169 ntBASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 AC124916.1-201ENST00000444020 547 ntBASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 RNU2-53P-201ENST00000516257 147 ntBASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 IGLV3-17-201ENST00000519099 244 ntBASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 AL512360.1-201ENST00000555346 234 ntBASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 HMGB1P33-201ENST00000563485 527 ntBASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 AL138976.2-201ENST00000563989 694 ntBASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 MIR5694-201ENST00000581190 76 ntBASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 RPL30P11-203ENST00000598995 310 ntBASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 AL713866.2-201ENST00000603579 219 ntBASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 AC116312.1-201ENST00000606841 314 ntBASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 MIR6895-201ENST00000613497 78 ntBASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 AL159153.1-201ENST00000619688 317 ntBASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC30Q5VVM6 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 RNU6-655P-201ENST00000362858 107 ntBASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 SNORA67.3-201ENST00000384366 140 ntBASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 SNORD116-4-201ENST00000384733 96 ntBASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 RNU6-1140P-201ENST00000410517 106 ntBASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 ARL5AP1-201ENST00000418991 388 ntBASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 AL513124.1-201ENST00000450410 614 ntBASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 AC090515.1-201ENST00000465295 476 ntBASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 MTCO3P38-201ENST00000468910 766 ntBASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 RNA5SP401-201ENST00000515920 127 ntBASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 RNU6-506P-201ENST00000516553 94 ntBASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 CENPUP1-201ENST00000526649 1202 ntBASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 PRELID2P1-201ENST00000552837 301 ntBASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 EIF1P4-201ENST00000572664 335 ntBASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 BNIP3P16-201ENST00000589779 534 ntBASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 AC123912.5-201ENST00000605470 343 ntBASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 AC103705.1-201ENST00000619013 241 ntBASIC2.73□□□□□ -1.97
CCDC30Q5VVM6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 Y_RNA.41-201ENST00000362646 102 ntBASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 RNU6-1210P-201ENST00000363775 107 ntBASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 RNU6-38P-201ENST00000384085 107 ntBASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 RNU6-1222P-201ENST00000384615 107 ntBASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 RPS29P13-201ENST00000402041 169 ntBASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 CBX3P9-201ENST00000402326 552 ntBASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 MIR1261-201ENST00000408659 82 ntBASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 RN7SKP284-201ENST00000411002 343 ntBASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 AL117339.3-201ENST00000418733 162 ntBASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 RNU6-333P-201ENST00000459117 107 ntBASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 AL121594.1-201ENST00000475906 575 ntBASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 SNORA14.1-201ENST00000516113 141 ntBASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 RNU6-189P-201ENST00000516120 101 ntBASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 RNU6-720P-201ENST00000516363 108 ntBASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 SNORA48.11-201ENST00000517015 89 ntBASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 AC121758.2-201ENST00000553271 193 ntBASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC30Q5VVM6 AC092881.1-201ENST00000638218 2733 ntBASIC2.71□□□□□ -1.98
CCDC30Q5VVM6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CCDC30Q5VVM6 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CCDC30Q5VVM6 MIR181A1-201ENST00000385026 110 ntBASIC2.71□□□□□ -1.98
CCDC30Q5VVM6 AL079342.1-201ENST00000401460 267 ntBASIC2.71□□□□□ -1.98
CCDC30Q5VVM6 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.71□□□□□ -1.98
CCDC30Q5VVM6 AL121601.2-201ENST00000438019 707 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms