Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC019205.3-201ENST00000424573 156 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.07□□□□□ -1.92
RNF220Q5VTB9 RPL30P4-201ENST00000429309 333 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.07□□□□□ -1.92
RNF220Q5VTB9 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.07□□□□□ -1.92
RNF220Q5VTB9 RPS12P18-201ENST00000442381 270 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 RPL39P40-201ENST00000445481 146 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 AC016700.2-201ENST00000446011 156 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 AC079354.2-201ENST00000453523 154 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 AL121594.1-201ENST00000475906 575 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 AC025518.1-201ENST00000479856 347 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 AP004217.1-201ENST00000480579 346 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 AC015911.1-201ENST00000495111 156 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 AC005741.1-201ENST00000511094 432 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 RNU5F-2P-201ENST00000516066 82 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 RNU1-45P-201ENST00000517191 141 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 AC021231.3-201ENST00000558497 370 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.07□□□□□ -1.92
RNF220Q5VTB9 HMGB1P24-202ENST00000615653 685 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 SNORA43.4-201ENST00000629559 138 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 AC012442.3-202ENST00000636742 206 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RNF220Q5VTB9 AC233981.2-201ENST00000611524 1614 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.07□□□□□ -1.92
RNF220Q5VTB9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
RNF220Q5VTB9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RNF220Q5VTB9 AC108206.1-201ENST00000570186 4159 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.07□□□□□ -1.92
RNF220Q5VTB9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
RNF220Q5VTB9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
RNF220Q5VTB9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RNF220Q5VTB9 RNU6-1286P-201ENST00000383871 107 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 Y_RNA.460-201ENST00000384255 102 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 RNU6-331P-201ENST00000384724 107 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 SNORA26.3-201ENST00000391119 136 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 CBX3P9-201ENST00000402326 552 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 AL357075.1-201ENST00000404107 726 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 AC008267.5-201ENST00000424928 265 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 CST9LP2-201ENST00000437612 320 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 RPL21P2-201ENST00000440049 481 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.06□□□□□ -1.92
RNF220Q5VTB9 Z96811.1-201ENST00000445880 108 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 MTCO3P10-201ENST00000455912 772 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 ELOCP24-201ENST00000456370 334 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.06□□□□□ -1.92
RNF220Q5VTB9 RNA5SP384-201ENST00000516615 116 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.06□□□□□ -1.92
RNF220Q5VTB9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.06□□□□□ -1.92
RNF220Q5VTB9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.06□□□□□ -1.92
RNF220Q5VTB9 MIR5571-201ENST00000577998 113 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 MIR3616-201ENST00000584070 92 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 AC060766.3-201ENST00000591442 263 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 BNIP3P22-201ENST00000593399 556 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.06□□□□□ -1.92
RNF220Q5VTB9 AL133255.1-201ENST00000606374 441 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 AC069294.1-201ENST00000608397 350 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 AL359314.1-201ENST00000616913 261 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 AC090574.1-201ENST00000623186 233 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 SNORD98-201ENST00000636377 67 ntBASIC3.06□□□□□ -1.92
RNF220Q5VTB9 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.05□□□□□ -1.92
RNF220Q5VTB9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RNF220Q5VTB9 MTND4P27-201ENST00000450813 1354 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 RNA5SP119-201ENST00000362715 117 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 Y_RNA.187-201ENST00000363918 113 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 RNU4-56P-201ENST00000364700 142 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 Y_RNA.315-201ENST00000365117 102 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 Y_RNA.533-201ENST00000384596 114 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 SNORA41-201ENST00000384675 132 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 MIR627-201ENST00000384979 97 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 RNA5SP229-201ENST00000410809 99 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 RPS20P15-201ENST00000412792 311 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.05□□□□□ -1.92
RNF220Q5VTB9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.05□□□□□ -1.92
RNF220Q5VTB9 RPL23AP50-201ENST00000434149 455 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 RNU7-152P-201ENST00000458982 64 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 AC073901.1-201ENST00000462471 408 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 RN7SL542P-201ENST00000467147 294 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 AC090525.1-201ENST00000479116 478 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 RPL23AP70-201ENST00000483361 460 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.05□□□□□ -1.92
RNF220Q5VTB9 HMGB1P35-201ENST00000503360 598 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 AC023141.11-201ENST00000508864 202 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 RN7SKP43-201ENST00000516173 320 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 SCARNA16.2-201ENST00000516520 172 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.05□□□□□ -1.92
RNF220Q5VTB9 MRPS36P4-201ENST00000534436 298 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.05□□□□□ -1.92
RNF220Q5VTB9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.05□□□□□ -1.92
RNF220Q5VTB9 RPL30P11-203ENST00000598995 310 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 AL050343.2-201ENST00000607338 280 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 uc_338.1-201ENST00000612113 180 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 AC135507.2-201ENST00000612443 309 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.05□□□□□ -1.92
RNF220Q5VTB9 ZNF299P-201ENST00000406845 1804 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 AC006026.1-201ENST00000444025 1803 ntBASIC3.05□□□□□ -1.92
RNF220Q5VTB9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.05□□□□□ -1.92
RNF220Q5VTB9 RNU1-70P-201ENST00000362618 164 ntBASIC3.04□□□□□ -1.92
RNF220Q5VTB9 RNU6-461P-201ENST00000364195 107 ntBASIC3.04□□□□□ -1.92
RNF220Q5VTB9 SNORA29-201ENST00000384183 140 ntBASIC3.04□□□□□ -1.92
RNF220Q5VTB9 SNORA75.6-201ENST00000391318 127 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms