Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MIR7702-201ENST00000621931 59 ntBASIC5.06□□□□□ -1.6
RC3H1Q5TC82 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RC3H1Q5TC82 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.06□□□□□ -1.6
RC3H1Q5TC82 AL139811.1-201ENST00000424779 2299 ntBASIC5.06□□□□□ -1.6
RC3H1Q5TC82 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.05□□□□□ -1.6
RC3H1Q5TC82 AL136964.1-201ENST00000622038 2990 ntBASIC5.05□□□□□ -1.6
RC3H1Q5TC82 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RC3H1Q5TC82 RNA5SP97-201ENST00000365006 84 ntBASIC5.05□□□□□ -1.6
RC3H1Q5TC82 RNU6-1074P-201ENST00000383995 104 ntBASIC5.05□□□□□ -1.6
RC3H1Q5TC82 MIR491-201ENST00000384877 84 ntBASIC5.05□□□□□ -1.6
RC3H1Q5TC82 RNU6ATAC19P-201ENST00000408096 110 ntBASIC5.05□□□□□ -1.6
RC3H1Q5TC82 Z85995.1-201ENST00000415547 335 ntBASIC5.05□□□□□ -1.6
RC3H1Q5TC82 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RC3H1Q5TC82 S100A11P1-201ENST00000477525 312 ntBASIC5.05□□□□□ -1.6
RC3H1Q5TC82 RN7SKP46-201ENST00000515942 234 ntBASIC5.05□□□□□ -1.6
RC3H1Q5TC82 SNORA43.2-201ENST00000516652 128 ntBASIC5.05□□□□□ -1.6
RC3H1Q5TC82 RNU2-56P-201ENST00000516826 190 ntBASIC5.05□□□□□ -1.6
RC3H1Q5TC82 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.05□□□□□ -1.6
RC3H1Q5TC82 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.05□□□□□ -1.6
RC3H1Q5TC82 MTND5P34-201ENST00000568888 325 ntBASIC5.05□□□□□ -1.6
RC3H1Q5TC82 AC024153.1-201ENST00000603103 365 ntBASIC5.05□□□□□ -1.6
RC3H1Q5TC82 U7.2-201ENST00000607576 63 ntBASIC5.05□□□□□ -1.6
RC3H1Q5TC82 AC091932.3-201ENST00000624223 323 ntBASIC5.05□□□□□ -1.6
RC3H1Q5TC82 SNORA43.4-201ENST00000629559 138 ntBASIC5.05□□□□□ -1.6
RC3H1Q5TC82 U6.105-201ENST00000637379 88 ntBASIC5.05□□□□□ -1.6
RC3H1Q5TC82 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RC3H1Q5TC82 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RC3H1Q5TC82 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
RC3H1Q5TC82 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RC3H1Q5TC82 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RC3H1Q5TC82 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
RC3H1Q5TC82 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RC3H1Q5TC82 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RC3H1Q5TC82 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RC3H1Q5TC82 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RC3H1Q5TC82 SNORD35B-201ENST00000363660 87 ntBASIC5.04□□□□□ -1.6
RC3H1Q5TC82 RNU6-1279P-201ENST00000383917 103 ntBASIC5.04□□□□□ -1.6
RC3H1Q5TC82 Y_RNA.498-201ENST00000384460 102 ntBASIC5.04□□□□□ -1.6
RC3H1Q5TC82 SNORA70E-201ENST00000384492 135 ntBASIC5.04□□□□□ -1.6
RC3H1Q5TC82 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.04□□□□□ -1.6
RC3H1Q5TC82 AC006461.1-201ENST00000412637 326 ntBASIC5.04□□□□□ -1.6
RC3H1Q5TC82 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.04□□□□□ -1.6
RC3H1Q5TC82 BPY2DP-201ENST00000422208 265 ntBASIC5.04□□□□□ -1.6
RC3H1Q5TC82 AL591419.1-201ENST00000427423 339 ntBASIC5.04□□□□□ -1.6
RC3H1Q5TC82 PPIAP15-201ENST00000479662 484 ntBASIC5.04□□□□□ -1.6
RC3H1Q5TC82 AC106707.2-201ENST00000484182 374 ntBASIC5.04□□□□□ -1.6
RC3H1Q5TC82 RN7SL271P-201ENST00000487601 295 ntBASIC5.04□□□□□ -1.6
RC3H1Q5TC82 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.04□□□□□ -1.6
RC3H1Q5TC82 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RC3H1Q5TC82 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.03□□□□□ -1.6
RC3H1Q5TC82 AC068254.2-201ENST00000623938 3577 ntBASIC5.03□□□□□ -1.6
RC3H1Q5TC82 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.03□□□□□ -1.6
RC3H1Q5TC82 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RC3H1Q5TC82 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.03□□□□□ -1.6
RC3H1Q5TC82 RNA5SP72-201ENST00000364442 117 ntBASIC5.03□□□□□ -1.6
RC3H1Q5TC82 SNORD32A-201ENST00000364805 84 ntBASIC5.03□□□□□ -1.6
RC3H1Q5TC82 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RC3H1Q5TC82 RNU2-54P-201ENST00000410299 190 ntBASIC5.03□□□□□ -1.6
RC3H1Q5TC82 AL591473.1-201ENST00000464297 313 ntBASIC5.03□□□□□ -1.6
RC3H1Q5TC82 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RC3H1Q5TC82 SCARNA15.2-201ENST00000516409 127 ntBASIC5.03□□□□□ -1.6
RC3H1Q5TC82 AL161713.1-201ENST00000555538 145 ntBASIC5.03□□□□□ -1.6
RC3H1Q5TC82 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.03□□□□□ -1.6
RC3H1Q5TC82 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.03□□□□□ -1.6
RC3H1Q5TC82 MIR5187-201ENST00000583479 76 ntBASIC5.03□□□□□ -1.6
RC3H1Q5TC82 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.03□□□□□ -1.6
RC3H1Q5TC82 AL078604.3-201ENST00000615580 211 ntBASIC5.03□□□□□ -1.6
RC3H1Q5TC82 MIR7975-201ENST00000619350 68 ntBASIC5.03□□□□□ -1.6
RC3H1Q5TC82 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
RC3H1Q5TC82 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RC3H1Q5TC82 AL049781.1-201ENST00000623195 3585 ntBASIC5.03□□□□□ -1.6
RC3H1Q5TC82 AL672167.1-203ENST00000641299 2975 ntBASIC5.03□□□□□ -1.6
RC3H1Q5TC82 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RC3H1Q5TC82 AF127577.6-201ENST00000623352 2191 ntBASIC5.02□□□□□ -1.61
RC3H1Q5TC82 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.02□□□□□ -1.61
RC3H1Q5TC82 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.02□□□□□ -1.61
RC3H1Q5TC82 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RC3H1Q5TC82 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.02□□□□□ -1.61
RC3H1Q5TC82 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RC3H1Q5TC82 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RC3H1Q5TC82 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RC3H1Q5TC82 RNU6-873P-201ENST00000363833 107 ntBASIC5.02□□□□□ -1.61
RC3H1Q5TC82 MIR626-201ENST00000385032 94 ntBASIC5.02□□□□□ -1.61
RC3H1Q5TC82 SNORD96B-201ENST00000386148 79 ntBASIC5.02□□□□□ -1.61
RC3H1Q5TC82 MIR1302-4-201ENST00000408701 150 ntBASIC5.02□□□□□ -1.61
RC3H1Q5TC82 RNU6-1245P-201ENST00000411130 106 ntBASIC5.02□□□□□ -1.61
RC3H1Q5TC82 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.02□□□□□ -1.61
RC3H1Q5TC82 AL035423.1-201ENST00000420331 213 ntBASIC5.02□□□□□ -1.61
RC3H1Q5TC82 AC098614.2-201ENST00000426040 255 ntBASIC5.02□□□□□ -1.61
RC3H1Q5TC82 RPL23AP95-201ENST00000426806 265 ntBASIC5.02□□□□□ -1.61
RC3H1Q5TC82 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.02□□□□□ -1.61
RC3H1Q5TC82 MTATP6P7-201ENST00000453315 681 ntBASIC5.02□□□□□ -1.61
RC3H1Q5TC82 RN7SL293P-201ENST00000481765 281 ntBASIC5.02□□□□□ -1.61
RC3H1Q5TC82 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RC3H1Q5TC82 AC107016.1-201ENST00000550463 337 ntBASIC5.02□□□□□ -1.61
RC3H1Q5TC82 NACAP3-201ENST00000552100 481 ntBASIC5.02□□□□□ -1.61
RC3H1Q5TC82 AL356157.2-201ENST00000605122 111 ntBASIC5.02□□□□□ -1.61
RC3H1Q5TC82 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
RC3H1Q5TC82 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC5.02□□□□□ -1.61
RC3H1Q5TC82 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms