Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 MIR124-3-201ENST00000384866 87 ntBASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 SNORA36B-201ENST00000410438 131 ntBASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 AC126124.2-201ENST00000413542 321 ntBASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 AL445687.1-201ENST00000439946 251 ntBASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 SNORD108-201ENST00000459332 71 ntBASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 MLLT10P2-201ENST00000506434 249 ntBASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 RNA5SP154-201ENST00000516193 111 ntBASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 RNU7-115P-201ENST00000516433 55 ntBASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 SNORA31.23-201ENST00000517219 133 ntBASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 AC011471.1-201ENST00000585766 187 ntBASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 AL023881.1-201ENST00000621088 301 ntBASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 ZNF137P-201ENST00000456718 1920 ntBASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 OR56B2P-202ENST00000641377 2453 ntBASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RNFT1Q5M7Z0 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
RNFT1Q5M7Z0 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 ZFRP1-201ENST00000457579 2970 ntBASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 Y_RNA.49-201ENST00000362714 112 ntBASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 RNU6-508P-201ENST00000363231 103 ntBASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 SNORA70.2-201ENST00000364506 135 ntBASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 RNU6-1080P-201ENST00000383982 107 ntBASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 MIR570-201ENST00000384917 97 ntBASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 RNA5SP496-201ENST00000391240 109 ntBASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 RN7SKP101-201ENST00000411376 320 ntBASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 RPL27AP8-201ENST00000424277 446 ntBASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 AL590383.1-201ENST00000428602 75 ntBASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 AL162591.2-201ENST00000449634 317 ntBASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 PARP1P2-201ENST00000556806 195 ntBASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 AC106871.1-201ENST00000568324 3102 ntBASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.21□□□□□ -1.74
RNFT1Q5M7Z0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 RNU1-100P-201ENST00000365255 165 ntBASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 AP002088.1-201ENST00000382740 395 ntBASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 RNU6-484P-201ENST00000384016 107 ntBASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 U1.1-201ENST00000384101 164 ntBASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 AC019205.3-201ENST00000424573 156 ntBASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 OR2AH1P-201ENST00000425717 928 ntBASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 RNU6-344P-201ENST00000516635 111 ntBASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 ATP5J2P6-201ENST00000565203 266 ntBASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 AL022345.2-201ENST00000606307 135 ntBASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 MIR6830-201ENST00000636015 70 ntBASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 U6.115-201ENST00000636045 103 ntBASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 NOL8P1-201ENST00000508336 3529 ntBASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 AC104623.2-202ENST00000623477 4002 ntBASIC4.2□□□□□ -1.74
RNFT1Q5M7Z0 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 RNU6-228P-201ENST00000362700 106 ntBASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 Y_RNA.528-201ENST00000384575 108 ntBASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 Y_RNA.549-201ENST00000384657 102 ntBASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 Y_RNA.587-201ENST00000391210 103 ntBASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 MIR1271-201ENST00000408537 86 ntBASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 RNA5SP225-201ENST00000410874 135 ntBASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 SCARNA10-201ENST00000459255 330 ntBASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 AC090515.1-201ENST00000465295 476 ntBASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 RPL39P34-201ENST00000477141 156 ntBASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 RNU6-521P-201ENST00000516663 105 ntBASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 SNORA31.16-201ENST00000516773 139 ntBASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 AC053481.4-201ENST00000583164 216 ntBASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 SNORD11B-201ENST00000607707 90 ntBASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 MIR6134-201ENST00000617606 109 ntBASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 Y_RNA.818-201ENST00000618813 71 ntBASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 AC011944.2-201ENST00000624440 683 ntBASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 MIR2052-201ENST00000636055 55 ntBASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 MIR3529-201ENST00000637713 78 ntBASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms