Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC114982.1-201ENST00000469402 321 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 SCARNA16.2-201ENST00000516520 172 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 RNU6-229P-201ENST00000516614 102 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.7□□□□□ -2.3
RFX7Q2KHR2 AC136628.3-201ENST00000521868 290 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 COPS8P3-201ENST00000526024 482 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.7□□□□□ -2.3
RFX7Q2KHR2 TRAV32-201ENST00000553993 340 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 AL512347.1-201ENST00000566420 503 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 MIR3937-201ENST00000580135 106 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 AP001542.1-201ENST00000591314 200 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 BNIP3P30-201ENST00000601184 574 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 AC090186.1-201ENST00000605991 572 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 AC106800.4-201ENST00000614905 153 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
RFX7Q2KHR2 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.7□□□□□ -2.3
RFX7Q2KHR2 RNU6-1210P-201ENST00000363775 107 ntBASIC0.69□□□□□ -2.3
RFX7Q2KHR2 RNA5SP493-201ENST00000364115 91 ntBASIC0.69□□□□□ -2.3
RFX7Q2KHR2 RNU6-843P-201ENST00000384454 104 ntBASIC0.69□□□□□ -2.3
RFX7Q2KHR2 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.69□□□□□ -2.3
RFX7Q2KHR2 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.69□□□□□ -2.3
RFX7Q2KHR2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.69□□□□□ -2.3
RFX7Q2KHR2 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.69□□□□□ -2.3
RFX7Q2KHR2 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.69□□□□□ -2.3
RFX7Q2KHR2 AC005094.1-201ENST00000440420 368 ntBASIC0.69□□□□□ -2.3
RFX7Q2KHR2 CENPUP1-201ENST00000526649 1202 ntBASIC0.69□□□□□ -2.3
RFX7Q2KHR2 DEFB131D-201ENST00000526803 184 ntBASIC0.69□□□□□ -2.3
RFX7Q2KHR2 AP003484.1-201ENST00000530974 250 ntBASIC0.69□□□□□ -2.3
RFX7Q2KHR2 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.69□□□□□ -2.3
RFX7Q2KHR2 AC009229.3-201ENST00000608056 282 ntBASIC0.69□□□□□ -2.3
RFX7Q2KHR2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.69□□□□□ -2.3
RFX7Q2KHR2 AC123767.1-202ENST00000620407 817 ntBASIC0.69□□□□□ -2.3
RFX7Q2KHR2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.69□□□□□ -2.3
RFX7Q2KHR2 ELL2P3-201ENST00000457883 1602 ntBASIC0.68□□□□□ -2.3
RFX7Q2KHR2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
RFX7Q2KHR2 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.68□□□□□ -2.3
RFX7Q2KHR2 MIR302D-201ENST00000362275 68 ntBASIC0.68□□□□□ -2.3
RFX7Q2KHR2 RNU6-1284P-201ENST00000363701 100 ntBASIC0.68□□□□□ -2.3
RFX7Q2KHR2 RNU6-701P-201ENST00000384059 107 ntBASIC0.68□□□□□ -2.3
RFX7Q2KHR2 MIR92A1-201ENST00000385233 78 ntBASIC0.68□□□□□ -2.3
RFX7Q2KHR2 CBX3P9-201ENST00000402326 552 ntBASIC0.68□□□□□ -2.3
RFX7Q2KHR2 MTND3P20-201ENST00000407663 186 ntBASIC0.68□□□□□ -2.3
RFX7Q2KHR2 AC069282.1-201ENST00000411911 526 ntBASIC0.68□□□□□ -2.3
RFX7Q2KHR2 EIF1P1-201ENST00000421436 341 ntBASIC0.68□□□□□ -2.3
RFX7Q2KHR2 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
RFX7Q2KHR2 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.68□□□□□ -2.3
RFX7Q2KHR2 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.68□□□□□ -2.3
RFX7Q2KHR2 RPL30P6-201ENST00000475925 342 ntBASIC0.68□□□□□ -2.3
RFX7Q2KHR2 AC105313.1-201ENST00000509121 353 ntBASIC0.68□□□□□ -2.3
RFX7Q2KHR2 RNY4P37-201ENST00000516225 96 ntBASIC0.68□□□□□ -2.3
RFX7Q2KHR2 RNU6-64P-201ENST00000517119 105 ntBASIC0.68□□□□□ -2.3
RFX7Q2KHR2 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.68□□□□□ -2.3
RFX7Q2KHR2 AC018630.3-201ENST00000542637 96 ntBASIC0.68□□□□□ -2.3
RFX7Q2KHR2 AC104072.1-201ENST00000568817 668 ntBASIC0.68□□□□□ -2.3
RFX7Q2KHR2 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.68□□□□□ -2.3
RFX7Q2KHR2 AC137800.2-201ENST00000574375 120 ntBASIC0.68□□□□□ -2.3
RFX7Q2KHR2 AC012467.1-201ENST00000607740 256 ntBASIC0.68□□□□□ -2.3
RFX7Q2KHR2 RNU6-212P-201ENST00000362642 104 ntBASIC0.67□□□□□ -2.3
RFX7Q2KHR2 RNA5SP62-201ENST00000363457 110 ntBASIC0.67□□□□□ -2.3
RFX7Q2KHR2 SNORA40C-201ENST00000391285 128 ntBASIC0.67□□□□□ -2.3
RFX7Q2KHR2 AL603865.2-201ENST00000401679 213 ntBASIC0.67□□□□□ -2.3
RFX7Q2KHR2 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.67□□□□□ -2.3
RFX7Q2KHR2 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.67□□□□□ -2.3
RFX7Q2KHR2 RPL30P1-201ENST00000488676 339 ntBASIC0.67□□□□□ -2.3
RFX7Q2KHR2 RNU6-334P-201ENST00000517072 102 ntBASIC0.67□□□□□ -2.3
RFX7Q2KHR2 MTND1P36-201ENST00000522384 936 ntBASIC0.67□□□□□ -2.3
RFX7Q2KHR2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.67□□□□□ -2.3
RFX7Q2KHR2 MTATP6P25-201ENST00000574491 261 ntBASIC0.67□□□□□ -2.3
RFX7Q2KHR2 AP000860.1-201ENST00000605250 559 ntBASIC0.67□□□□□ -2.3
RFX7Q2KHR2 RPL21P136-201ENST00000605378 396 ntBASIC0.67□□□□□ -2.3
RFX7Q2KHR2 AC112220.3-201ENST00000605502 502 ntBASIC0.67□□□□□ -2.3
RFX7Q2KHR2 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.67□□□□□ -2.3
RFX7Q2KHR2 RMST_4.1-201ENST00000616886 107 ntBASIC0.67□□□□□ -2.3
RFX7Q2KHR2 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.67□□□□□ -2.3
RFX7Q2KHR2 AC100821.1-201ENST00000523153 2479 ntBASIC0.66□□□□□ -2.3
RFX7Q2KHR2 MIR19A-201ENST00000384878 82 ntBASIC0.66□□□□□ -2.3
RFX7Q2KHR2 RNU6-817P-201ENST00000391083 104 ntBASIC0.66□□□□□ -2.3
RFX7Q2KHR2 RNU6-1025P-201ENST00000410629 104 ntBASIC0.66□□□□□ -2.3
RFX7Q2KHR2 AC006461.1-201ENST00000412637 326 ntBASIC0.66□□□□□ -2.3
RFX7Q2KHR2 RPL21P111-201ENST00000418453 477 ntBASIC0.66□□□□□ -2.3
RFX7Q2KHR2 AL590556.1-201ENST00000423231 483 ntBASIC0.66□□□□□ -2.3
RFX7Q2KHR2 AL589872.1-201ENST00000426602 288 ntBASIC0.66□□□□□ -2.3
RFX7Q2KHR2 RNA5SP269-201ENST00000459032 137 ntBASIC0.66□□□□□ -2.3
RFX7Q2KHR2 HMGB1P30-201ENST00000492455 606 ntBASIC0.66□□□□□ -2.3
RFX7Q2KHR2 AL163195.1-201ENST00000496941 348 ntBASIC0.66□□□□□ -2.3
RFX7Q2KHR2 RNA5SP121-201ENST00000516537 101 ntBASIC0.66□□□□□ -2.3
RFX7Q2KHR2 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
RFX7Q2KHR2 DEFB130C-202ENST00000530001 230 ntBASIC0.66□□□□□ -2.3
RFX7Q2KHR2 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.66□□□□□ -2.3
RFX7Q2KHR2 AL132657.2-201ENST00000564417 358 ntBASIC0.66□□□□□ -2.3
RFX7Q2KHR2 AL022345.2-201ENST00000606307 135 ntBASIC0.66□□□□□ -2.3
RFX7Q2KHR2 AL031775.1-201ENST00000607014 887 ntBASIC0.66□□□□□ -2.3
RFX7Q2KHR2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.66□□□□□ -2.3
RFX7Q2KHR2 AC023158.2-201ENST00000614876 543 ntBASIC0.66□□□□□ -2.3
RFX7Q2KHR2 AL590240.4-201ENST00000616908 390 ntBASIC0.66□□□□□ -2.3
RFX7Q2KHR2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
RFX7Q2KHR2 snoU2_19.1-201ENST00000362361 80 ntBASIC0.65□□□□□ -2.31
RFX7Q2KHR2 RNU6-487P-201ENST00000365430 104 ntBASIC0.65□□□□□ -2.31
RFX7Q2KHR2 RNU6-166P-201ENST00000384371 107 ntBASIC0.65□□□□□ -2.31
RFX7Q2KHR2 RNU6-1065P-201ENST00000384513 106 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms