Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 BNIP3P6-201ENST00000549284 499 ntBASIC1.77□□□□□ -2.13
SMARCB1Q12824 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.77□□□□□ -2.13
SMARCB1Q12824 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.77□□□□□ -2.13
SMARCB1Q12824 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.77□□□□□ -2.13
SMARCB1Q12824 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.77□□□□□ -2.13
SMARCB1Q12824 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.77□□□□□ -2.13
SMARCB1Q12824 RSL24D1P11-201ENST00000591045 491 ntBASIC1.77□□□□□ -2.13
SMARCB1Q12824 AC025449.1-201ENST00000603896 529 ntBASIC1.77□□□□□ -2.13
SMARCB1Q12824 AL138963.2-201ENST00000605137 226 ntBASIC1.77□□□□□ -2.13
SMARCB1Q12824 NDUFA8P1-201ENST00000605525 367 ntBASIC1.77□□□□□ -2.13
SMARCB1Q12824 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.77□□□□□ -2.13
SMARCB1Q12824 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.77□□□□□ -2.13
SMARCB1Q12824 RMST_4.1-201ENST00000616886 107 ntBASIC1.77□□□□□ -2.13
SMARCB1Q12824 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.77□□□□□ -2.13
SMARCB1Q12824 ELL2P3-201ENST00000457883 1602 ntBASIC1.77□□□□□ -2.13
SMARCB1Q12824 RNU6-1097P-201ENST00000363586 107 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 RNU6-715P-201ENST00000365204 103 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 RNU6-1032P-201ENST00000384100 107 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 RNU6-843P-201ENST00000384454 104 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 RNU6-456P-201ENST00000384493 107 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 SNORD116-20-201ENST00000384529 92 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 Y_RNA.553-201ENST00000384670 102 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 AC068050.1-201ENST00000394891 380 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 RNU2-9P-201ENST00000410194 145 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 RNU6-607P-201ENST00000411283 108 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 RNU6-387P-201ENST00000411331 105 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 RPS20P15-201ENST00000412792 311 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.76□□□□□ -2.13
SMARCB1Q12824 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.76□□□□□ -2.13
SMARCB1Q12824 RPL7P12-201ENST00000446719 750 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 AC132479.1-201ENST00000449160 144 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 MTND1P27-201ENST00000451117 902 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 TPT1P7-201ENST00000458300 517 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 AC140059.1-201ENST00000489238 361 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.76□□□□□ -2.13
SMARCB1Q12824 AC117532.1-201ENST00000514638 323 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.76□□□□□ -2.13
SMARCB1Q12824 CBX3P4-201ENST00000538909 354 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.76□□□□□ -2.13
SMARCB1Q12824 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.76□□□□□ -2.13
SMARCB1Q12824 AC024614.2-201ENST00000577584 372 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 MIR4703-201ENST00000577728 79 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.76□□□□□ -2.13
SMARCB1Q12824 AC021646.1-201ENST00000605469 484 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 AC093788.1-201ENST00000609356 927 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 U6.42-201ENST00000618440 107 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 RMST_7.1-201ENST00000621935 268 ntBASIC1.76□□□□□ -2.13
SMARCB1Q12824 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
SMARCB1Q12824 Y_RNA.359-201ENST00000365498 102 ntBASIC1.75□□□□□ -2.13
SMARCB1Q12824 RNU4-48P-201ENST00000365559 182 ntBASIC1.75□□□□□ -2.13
SMARCB1Q12824 AL591034.2-201ENST00000402839 359 ntBASIC1.75□□□□□ -2.13
SMARCB1Q12824 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.75□□□□□ -2.13
SMARCB1Q12824 IFNA20P-201ENST00000436840 528 ntBASIC1.75□□□□□ -2.13
SMARCB1Q12824 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.75□□□□□ -2.13
SMARCB1Q12824 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.75□□□□□ -2.13
SMARCB1Q12824 MTND1P18-201ENST00000448191 573 ntBASIC1.75□□□□□ -2.13
SMARCB1Q12824 RNU6-956P-201ENST00000458868 103 ntBASIC1.75□□□□□ -2.13
SMARCB1Q12824 RNU7-182P-201ENST00000459009 62 ntBASIC1.75□□□□□ -2.13
SMARCB1Q12824 HMGB1P30-201ENST00000492455 606 ntBASIC1.75□□□□□ -2.13
SMARCB1Q12824 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SMARCB1Q12824 Y_RNA.688-201ENST00000516565 95 ntBASIC1.75□□□□□ -2.13
SMARCB1Q12824 SNORA43.2-201ENST00000516652 128 ntBASIC1.75□□□□□ -2.13
SMARCB1Q12824 AL356057.1-201ENST00000533798 831 ntBASIC1.75□□□□□ -2.13
SMARCB1Q12824 GNAI2P1-201ENST00000541815 315 ntBASIC1.75□□□□□ -2.13
SMARCB1Q12824 CR383656.8-201ENST00000549046 145 ntBASIC1.75□□□□□ -2.13
SMARCB1Q12824 SUB1P2-201ENST00000556401 297 ntBASIC1.75□□□□□ -2.13
SMARCB1Q12824 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.75□□□□□ -2.13
SMARCB1Q12824 AL391646.1-201ENST00000603860 190 ntBASIC1.75□□□□□ -2.13
SMARCB1Q12824 RNU6-91P-201ENST00000607774 107 ntBASIC1.75□□□□□ -2.13
SMARCB1Q12824 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.75□□□□□ -2.13
SMARCB1Q12824 AC009161.2-201ENST00000624626 138 ntBASIC1.75□□□□□ -2.13
SMARCB1Q12824 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SMARCB1Q12824 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SMARCB1Q12824 RNU6-1287P-201ENST00000362914 107 ntBASIC1.74□□□□□ -2.13
SMARCB1Q12824 RNU6-529P-201ENST00000363383 104 ntBASIC1.74□□□□□ -2.13
SMARCB1Q12824 RNU6-45P-201ENST00000384471 107 ntBASIC1.74□□□□□ -2.13
SMARCB1Q12824 RNU6-1060P-201ENST00000384664 107 ntBASIC1.74□□□□□ -2.13
SMARCB1Q12824 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.74□□□□□ -2.13
SMARCB1Q12824 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.74□□□□□ -2.13
SMARCB1Q12824 AL596276.1-201ENST00000434465 418 ntBASIC1.74□□□□□ -2.13
SMARCB1Q12824 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.74□□□□□ -2.13
SMARCB1Q12824 AC107032.1-201ENST00000485945 480 ntBASIC1.74□□□□□ -2.13
SMARCB1Q12824 RPL22P13-201ENST00000493291 347 ntBASIC1.74□□□□□ -2.13
SMARCB1Q12824 AC010424.1-201ENST00000506336 297 ntBASIC1.74□□□□□ -2.13
SMARCB1Q12824 AC079140.3-201ENST00000511111 550 ntBASIC1.74□□□□□ -2.13
SMARCB1Q12824 RNA5SP503-201ENST00000517047 117 ntBASIC1.74□□□□□ -2.13
SMARCB1Q12824 MTCO2P4-201ENST00000517968 247 ntBASIC1.74□□□□□ -2.13
SMARCB1Q12824 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.74□□□□□ -2.13
SMARCB1Q12824 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.74□□□□□ -2.13
SMARCB1Q12824 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.74□□□□□ -2.13
SMARCB1Q12824 AC006362.1-201ENST00000567392 174 ntBASIC1.74□□□□□ -2.13
SMARCB1Q12824 MIR5583-1-201ENST00000580941 59 ntBASIC1.74□□□□□ -2.13
SMARCB1Q12824 AC010620.1-201ENST00000601088 1102 ntBASIC1.74□□□□□ -2.13
SMARCB1Q12824 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.74□□□□□ -2.13
SMARCB1Q12824 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
SMARCB1Q12824 AL390237.1-201ENST00000404226 1415 ntBASIC1.74□□□□□ -2.13
SMARCB1Q12824 AC006026.1-201ENST00000444025 1803 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 RNU6-78P-201ENST00000362897 107 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 Y_RNA.77-201ENST00000362962 107 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 RNU1-23P-201ENST00000363361 144 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms