Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.91□□□□□ -1.94
RAE1P78406 RNU1-115P-201ENST00000365329 160 ntBASIC2.91□□□□□ -1.94
RAE1P78406 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RAE1P78406 AC117470.1-201ENST00000381974 330 ntBASIC2.91□□□□□ -1.94
RAE1P78406 SNORA54-201ENST00000384281 123 ntBASIC2.91□□□□□ -1.94
RAE1P78406 Y_RNA.577-201ENST00000384794 101 ntBASIC2.91□□□□□ -1.94
RAE1P78406 MIR767-201ENST00000390228 109 ntBASIC2.91□□□□□ -1.94
RAE1P78406 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
RAE1P78406 RNA5SP390-201ENST00000410191 113 ntBASIC2.91□□□□□ -1.94
RAE1P78406 MCFD2P1-201ENST00000417812 300 ntBASIC2.91□□□□□ -1.94
RAE1P78406 EIF1AXP1-201ENST00000419267 435 ntBASIC2.91□□□□□ -1.94
RAE1P78406 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.91□□□□□ -1.94
RAE1P78406 AC008267.5-201ENST00000424928 265 ntBASIC2.91□□□□□ -1.94
RAE1P78406 YME1L1P1-201ENST00000429435 297 ntBASIC2.91□□□□□ -1.94
RAE1P78406 MTND4P19-201ENST00000446659 478 ntBASIC2.91□□□□□ -1.94
RAE1P78406 AL031659.1-201ENST00000447075 539 ntBASIC2.91□□□□□ -1.94
RAE1P78406 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.91□□□□□ -1.94
RAE1P78406 RPL30P10-201ENST00000488148 337 ntBASIC2.91□□□□□ -1.94
RAE1P78406 Y_RNA.661-201ENST00000516003 99 ntBASIC2.91□□□□□ -1.94
RAE1P78406 SNORD116.3-201ENST00000517176 78 ntBASIC2.91□□□□□ -1.94
RAE1P78406 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.91□□□□□ -1.94
RAE1P78406 MIR5701-3-201ENST00000578890 82 ntBASIC2.91□□□□□ -1.94
RAE1P78406 MIR5701-1-201ENST00000585138 82 ntBASIC2.91□□□□□ -1.94
RAE1P78406 RNU6-91P-201ENST00000607774 107 ntBASIC2.91□□□□□ -1.94
RAE1P78406 AC040896.1-201ENST00000613819 479 ntBASIC2.91□□□□□ -1.94
RAE1P78406 MIR5701-2-201ENST00000615634 82 ntBASIC2.91□□□□□ -1.94
RAE1P78406 AC012314.7-201ENST00000619693 93 ntBASIC2.91□□□□□ -1.94
RAE1P78406 AC007318.2-201ENST00000620999 243 ntBASIC2.91□□□□□ -1.94
RAE1P78406 AC092628.2-201ENST00000622492 339 ntBASIC2.91□□□□□ -1.94
RAE1P78406 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RAE1P78406 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RAE1P78406 AC103988.1-201ENST00000566382 2177 ntBASIC2.91□□□□□ -1.94
RAE1P78406 AC009541.1-201ENST00000438279 2662 ntBASIC2.91□□□□□ -1.94
RAE1P78406 AL035425.3-201ENST00000564206 4996 ntBASIC2.91□□□□□ -1.94
RAE1P78406 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
RAE1P78406 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
RAE1P78406 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
RAE1P78406 Y_RNA.496-201ENST00000384444 101 ntBASIC2.9□□□□□ -1.95
RAE1P78406 MIR670-201ENST00000390142 98 ntBASIC2.9□□□□□ -1.95
RAE1P78406 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
RAE1P78406 AL138885.1-201ENST00000405921 675 ntBASIC2.9□□□□□ -1.95
RAE1P78406 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.9□□□□□ -1.95
RAE1P78406 PHBP14-201ENST00000512887 367 ntBASIC2.9□□□□□ -1.95
RAE1P78406 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.9□□□□□ -1.95
RAE1P78406 RN7SKP43-201ENST00000516173 320 ntBASIC2.9□□□□□ -1.95
RAE1P78406 RNU5B-3P-201ENST00000516601 115 ntBASIC2.9□□□□□ -1.95
RAE1P78406 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.9□□□□□ -1.95
RAE1P78406 AC010653.1-201ENST00000571108 881 ntBASIC2.9□□□□□ -1.95
RAE1P78406 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.9□□□□□ -1.95
RAE1P78406 AC060766.3-201ENST00000591442 263 ntBASIC2.9□□□□□ -1.95
RAE1P78406 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.9□□□□□ -1.95
RAE1P78406 AC083806.3-201ENST00000614016 455 ntBASIC2.9□□□□□ -1.95
RAE1P78406 SNORA50A-202ENST00000629536 136 ntBASIC2.9□□□□□ -1.95
RAE1P78406 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RAE1P78406 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.89□□□□□ -1.95
RAE1P78406 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RAE1P78406 RNU6-1141P-201ENST00000364520 107 ntBASIC2.89□□□□□ -1.95
RAE1P78406 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.89□□□□□ -1.95
RAE1P78406 RNU6-1032P-201ENST00000384100 107 ntBASIC2.89□□□□□ -1.95
RAE1P78406 RNY1P14-201ENST00000384426 108 ntBASIC2.89□□□□□ -1.95
RAE1P78406 RNU6-1222P-201ENST00000384615 107 ntBASIC2.89□□□□□ -1.95
RAE1P78406 MIR544A-201ENST00000384855 91 ntBASIC2.89□□□□□ -1.95
RAE1P78406 MIR147B-201ENST00000390185 80 ntBASIC2.89□□□□□ -1.95
RAE1P78406 SNORA48.8-201ENST00000391324 134 ntBASIC2.89□□□□□ -1.95
RAE1P78406 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.89□□□□□ -1.95
RAE1P78406 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.89□□□□□ -1.95
RAE1P78406 AL513124.1-201ENST00000450410 614 ntBASIC2.89□□□□□ -1.95
RAE1P78406 AL441985.1-201ENST00000457727 251 ntBASIC2.89□□□□□ -1.95
RAE1P78406 RN7SL601P-201ENST00000471221 293 ntBASIC2.89□□□□□ -1.95
RAE1P78406 RPS26P21-201ENST00000475397 348 ntBASIC2.89□□□□□ -1.95
RAE1P78406 RN7SL504P-201ENST00000494496 287 ntBASIC2.89□□□□□ -1.95
RAE1P78406 MTND4LP22-201ENST00000508209 276 ntBASIC2.89□□□□□ -1.95
RAE1P78406 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.89□□□□□ -1.95
RAE1P78406 AC023442.1-201ENST00000531247 422 ntBASIC2.89□□□□□ -1.95
RAE1P78406 AC091564.4-201ENST00000533934 2194 ntBASIC2.89□□□□□ -1.95
RAE1P78406 AC016256.1-201ENST00000547971 354 ntBASIC2.89□□□□□ -1.95
RAE1P78406 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
RAE1P78406 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.88□□□□□ -1.95
RAE1P78406 SNORA63.1-201ENST00000362493 131 ntBASIC2.88□□□□□ -1.95
RAE1P78406 RNU6-799P-201ENST00000363567 107 ntBASIC2.88□□□□□ -1.95
RAE1P78406 RNU6-99P-201ENST00000364721 107 ntBASIC2.88□□□□□ -1.95
RAE1P78406 RNU6-639P-201ENST00000384074 107 ntBASIC2.88□□□□□ -1.95
RAE1P78406 RNU6-1160P-201ENST00000384546 104 ntBASIC2.88□□□□□ -1.95
RAE1P78406 MIR606-201ENST00000384851 96 ntBASIC2.88□□□□□ -1.95
RAE1P78406 MIR7-3-201ENST00000384898 110 ntBASIC2.88□□□□□ -1.95
RAE1P78406 RN7SKP61-201ENST00000410642 295 ntBASIC2.88□□□□□ -1.95
RAE1P78406 MRPS18CP6-201ENST00000423587 223 ntBASIC2.88□□□□□ -1.95
RAE1P78406 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.88□□□□□ -1.95
RAE1P78406 AC006028.1-201ENST00000438379 402 ntBASIC2.88□□□□□ -1.95
RAE1P78406 GSTA11P-201ENST00000452866 669 ntBASIC2.88□□□□□ -1.95
RAE1P78406 PRSS3P4-201ENST00000453323 162 ntBASIC2.88□□□□□ -1.95
RAE1P78406 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.88□□□□□ -1.95
RAE1P78406 RPS27P26-201ENST00000494583 239 ntBASIC2.88□□□□□ -1.95
RAE1P78406 AC074250.1-201ENST00000511117 192 ntBASIC2.88□□□□□ -1.95
RAE1P78406 AC091874.1-201ENST00000511402 339 ntBASIC2.88□□□□□ -1.95
RAE1P78406 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.88□□□□□ -1.95
RAE1P78406 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RAE1P78406 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.88□□□□□ -1.95
RAE1P78406 AC004584.2-201ENST00000570407 410 ntBASIC2.88□□□□□ -1.95
RAE1P78406 MIR5004-201ENST00000579078 107 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms