Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AL031659.1-201ENST00000447075 539 ntBASIC3.71□□□□□ -1.82
YBX1P67809 SSXP4-201ENST00000451349 245 ntBASIC3.71□□□□□ -1.82
YBX1P67809 AP001324.2-201ENST00000461163 319 ntBASIC3.71□□□□□ -1.82
YBX1P67809 AC117440.1-201ENST00000474107 571 ntBASIC3.71□□□□□ -1.82
YBX1P67809 TRBV12-2-201ENST00000489763 344 ntBASIC3.71□□□□□ -1.82
YBX1P67809 RAC1P2-201ENST00000511164 579 ntBASIC3.71□□□□□ -1.82
YBX1P67809 RNY3P16-201ENST00000516338 101 ntBASIC3.71□□□□□ -1.82
YBX1P67809 SNORA70.16-201ENST00000516390 95 ntBASIC3.71□□□□□ -1.82
YBX1P67809 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.71□□□□□ -1.82
YBX1P67809 MIR4423-201ENST00000580922 80 ntBASIC3.71□□□□□ -1.82
YBX1P67809 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.71□□□□□ -1.82
YBX1P67809 AC024153.1-201ENST00000603103 365 ntBASIC3.71□□□□□ -1.82
YBX1P67809 AC136601.2-201ENST00000604356 474 ntBASIC3.71□□□□□ -1.82
YBX1P67809 AC048347.1-201ENST00000624621 427 ntBASIC3.71□□□□□ -1.82
YBX1P67809 IGHVIII-44-202ENST00000636235 289 ntBASIC3.71□□□□□ -1.82
YBX1P67809 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
YBX1P67809 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.71□□□□□ -1.82
YBX1P67809 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
YBX1P67809 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.71□□□□□ -1.82
YBX1P67809 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
YBX1P67809 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
YBX1P67809 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
YBX1P67809 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
YBX1P67809 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
YBX1P67809 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
YBX1P67809 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
YBX1P67809 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
YBX1P67809 Y_RNA.82-201ENST00000363000 102 ntBASIC3.7□□□□□ -1.82
YBX1P67809 Y_RNA.92-201ENST00000363043 102 ntBASIC3.7□□□□□ -1.82
YBX1P67809 Y_RNA.235-201ENST00000364412 102 ntBASIC3.7□□□□□ -1.82
YBX1P67809 Y_RNA.306-201ENST00000365015 102 ntBASIC3.7□□□□□ -1.82
YBX1P67809 Y_RNA.312-201ENST00000365089 102 ntBASIC3.7□□□□□ -1.82
YBX1P67809 Y_RNA.322-201ENST00000365151 102 ntBASIC3.7□□□□□ -1.82
YBX1P67809 SNORD50.2-201ENST00000365465 70 ntBASIC3.7□□□□□ -1.82
YBX1P67809 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.7□□□□□ -1.82
YBX1P67809 RNU6-20P-201ENST00000384106 107 ntBASIC3.7□□□□□ -1.82
YBX1P67809 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.7□□□□□ -1.82
YBX1P67809 AL139247.1-201ENST00000422768 325 ntBASIC3.7□□□□□ -1.82
YBX1P67809 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.7□□□□□ -1.82
YBX1P67809 WARS2P1-201ENST00000429678 537 ntBASIC3.7□□□□□ -1.82
YBX1P67809 AC096638.1-201ENST00000444678 216 ntBASIC3.7□□□□□ -1.82
YBX1P67809 AL133547.1-201ENST00000448546 220 ntBASIC3.7□□□□□ -1.82
YBX1P67809 Y_RNA.650-201ENST00000459002 102 ntBASIC3.7□□□□□ -1.82
YBX1P67809 AC146944.2-203ENST00000502493 354 ntBASIC3.7□□□□□ -1.82
YBX1P67809 AC091874.1-201ENST00000511402 339 ntBASIC3.7□□□□□ -1.82
YBX1P67809 AC139495.1-202ENST00000513164 354 ntBASIC3.7□□□□□ -1.82
YBX1P67809 SNORA31.8-201ENST00000516327 108 ntBASIC3.7□□□□□ -1.82
YBX1P67809 RN7SKP49-201ENST00000516675 260 ntBASIC3.7□□□□□ -1.82
YBX1P67809 Y_RNA.777-201ENST00000516982 102 ntBASIC3.7□□□□□ -1.82
YBX1P67809 IGKV2D-19-201ENST00000523346 262 ntBASIC3.7□□□□□ -1.82
YBX1P67809 AP004607.1-201ENST00000524456 203 ntBASIC3.7□□□□□ -1.82
YBX1P67809 RPL21P9-201ENST00000556149 474 ntBASIC3.7□□□□□ -1.82
YBX1P67809 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.7□□□□□ -1.82
YBX1P67809 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.7□□□□□ -1.82
YBX1P67809 Y_RNA.771-201ENST00000598668 102 ntBASIC3.7□□□□□ -1.82
YBX1P67809 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.7□□□□□ -1.82
YBX1P67809 AC006001.4-201ENST00000622243 395 ntBASIC3.7□□□□□ -1.82
YBX1P67809 Y_RNA.789-201ENST00000622480 102 ntBASIC3.7□□□□□ -1.82
YBX1P67809 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.7□□□□□ -1.82
YBX1P67809 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
YBX1P67809 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
YBX1P67809 AL133383.2-201ENST00000622958 2336 ntBASIC3.7□□□□□ -1.82
YBX1P67809 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
YBX1P67809 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
YBX1P67809 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.69□□□□□ -1.82
YBX1P67809 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
YBX1P67809 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
YBX1P67809 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.69□□□□□ -1.82
YBX1P67809 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
YBX1P67809 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
YBX1P67809 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
YBX1P67809 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.69□□□□□ -1.82
YBX1P67809 LINC02471-203ENST00000641941 4752 ntBASIC3.69□□□□□ -1.82
YBX1P67809 MIR410-201ENST00000362222 80 ntBASIC3.69□□□□□ -1.82
YBX1P67809 RNU6-1175P-201ENST00000365200 107 ntBASIC3.69□□□□□ -1.82
YBX1P67809 Y_RNA.398-201ENST00000383952 99 ntBASIC3.69□□□□□ -1.82
YBX1P67809 RNU6-142P-201ENST00000384019 107 ntBASIC3.69□□□□□ -1.82
YBX1P67809 SNORA29-201ENST00000384183 140 ntBASIC3.69□□□□□ -1.82
YBX1P67809 MIR199A2-201ENST00000385289 110 ntBASIC3.69□□□□□ -1.82
YBX1P67809 RNU2-37P-201ENST00000410695 177 ntBASIC3.69□□□□□ -1.82
YBX1P67809 RNU6-394P-201ENST00000410735 107 ntBASIC3.69□□□□□ -1.82
YBX1P67809 AL390729.2-201ENST00000416137 156 ntBASIC3.69□□□□□ -1.82
YBX1P67809 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.69□□□□□ -1.82
YBX1P67809 AC243964.1-201ENST00000441814 261 ntBASIC3.69□□□□□ -1.82
YBX1P67809 AC009237.8-201ENST00000445492 379 ntBASIC3.69□□□□□ -1.82
YBX1P67809 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.69□□□□□ -1.82
YBX1P67809 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.69□□□□□ -1.82
YBX1P67809 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.69□□□□□ -1.82
YBX1P67809 RPL26P26-201ENST00000480251 434 ntBASIC3.69□□□□□ -1.82
YBX1P67809 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.69□□□□□ -1.82
YBX1P67809 SNORA27.4-201ENST00000516650 95 ntBASIC3.69□□□□□ -1.82
YBX1P67809 RNU6-567P-201ENST00000516746 107 ntBASIC3.69□□□□□ -1.82
YBX1P67809 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.69□□□□□ -1.82
YBX1P67809 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.69□□□□□ -1.82
YBX1P67809 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.69□□□□□ -1.82
YBX1P67809 LINC00933-203ENST00000559812 219 ntBASIC3.69□□□□□ -1.82
YBX1P67809 UBL5P4-201ENST00000562584 236 ntBASIC3.69□□□□□ -1.82
YBX1P67809 CYCSP39-201ENST00000565821 309 ntBASIC3.69□□□□□ -1.82
YBX1P67809 AC087499.8-201ENST00000578406 226 ntBASIC3.69□□□□□ -1.82
YBX1P67809 MIR5685-201ENST00000579080 79 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms