Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SNORD96B-201ENST00000386148 79 ntBASIC4.8□□□□□ -1.64
USP46P62068 AL592291.1-201ENST00000403830 352 ntBASIC4.8□□□□□ -1.64
USP46P62068 RNU6-383P-201ENST00000410864 94 ntBASIC4.8□□□□□ -1.64
USP46P62068 Z75741.1-201ENST00000446793 314 ntBASIC4.8□□□□□ -1.64
USP46P62068 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.8□□□□□ -1.64
USP46P62068 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.8□□□□□ -1.64
USP46P62068 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.8□□□□□ -1.64
USP46P62068 MIR4284-201ENST00000578924 81 ntBASIC4.8□□□□□ -1.64
USP46P62068 AL356218.2-201ENST00000605264 187 ntBASIC4.8□□□□□ -1.64
USP46P62068 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP46P62068 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP46P62068 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
USP46P62068 AL672167.1-203ENST00000641299 2975 ntBASIC4.8□□□□□ -1.64
USP46P62068 AC107068.1-201ENST00000563286 4218 ntBASIC4.8□□□□□ -1.64
USP46P62068 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP46P62068 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
USP46P62068 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP46P62068 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP46P62068 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.79□□□□□ -1.64
USP46P62068 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
USP46P62068 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.79□□□□□ -1.64
USP46P62068 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.79□□□□□ -1.64
USP46P62068 RNU6-235P-201ENST00000362644 107 ntBASIC4.79□□□□□ -1.64
USP46P62068 RNU6-1255P-201ENST00000363434 112 ntBASIC4.79□□□□□ -1.64
USP46P62068 U3.9-201ENST00000363823 204 ntBASIC4.79□□□□□ -1.64
USP46P62068 RNA5SP201-201ENST00000410316 124 ntBASIC4.79□□□□□ -1.64
USP46P62068 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.79□□□□□ -1.64
USP46P62068 FCF1P8-201ENST00000510322 597 ntBASIC4.79□□□□□ -1.64
USP46P62068 Y_RNA.709-201ENST00000516952 92 ntBASIC4.79□□□□□ -1.64
USP46P62068 CYCSP26-201ENST00000534107 320 ntBASIC4.79□□□□□ -1.64
USP46P62068 MIR5688-201ENST00000580619 83 ntBASIC4.79□□□□□ -1.64
USP46P62068 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP46P62068 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.79□□□□□ -1.64
USP46P62068 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
USP46P62068 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP46P62068 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.79□□□□□ -1.64
USP46P62068 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP46P62068 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP46P62068 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.78□□□□□ -1.64
USP46P62068 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
USP46P62068 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.78□□□□□ -1.64
USP46P62068 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
USP46P62068 SNORA62-201ENST00000365493 153 ntBASIC4.78□□□□□ -1.64
USP46P62068 AC068538.1-201ENST00000376856 336 ntBASIC4.78□□□□□ -1.64
USP46P62068 SNORA22-201ENST00000383907 134 ntBASIC4.78□□□□□ -1.64
USP46P62068 RNU6-19P-201ENST00000384718 107 ntBASIC4.78□□□□□ -1.64
USP46P62068 SNORA48.5-201ENST00000391143 135 ntBASIC4.78□□□□□ -1.64
USP46P62068 SNORA75.5-201ENST00000391291 81 ntBASIC4.78□□□□□ -1.64
USP46P62068 CRYBB2P1-203ENST00000415709 538 ntBASIC4.78□□□□□ -1.64
USP46P62068 AL691449.1-201ENST00000426570 421 ntBASIC4.78□□□□□ -1.64
USP46P62068 RN7SL132P-201ENST00000478131 296 ntBASIC4.78□□□□□ -1.64
USP46P62068 SNORA70.12-201ENST00000516084 153 ntBASIC4.78□□□□□ -1.64
USP46P62068 RNU2-44P-201ENST00000516795 194 ntBASIC4.78□□□□□ -1.64
USP46P62068 IGLVIV-65-201ENST00000517313 360 ntBASIC4.78□□□□□ -1.64
USP46P62068 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.78□□□□□ -1.64
USP46P62068 AC015912.2-201ENST00000571053 181 ntBASIC4.78□□□□□ -1.64
USP46P62068 MIR4679-2-201ENST00000578358 77 ntBASIC4.78□□□□□ -1.64
USP46P62068 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.78□□□□□ -1.64
USP46P62068 AL031274.2-201ENST00000599419 203 ntBASIC4.78□□□□□ -1.64
USP46P62068 AC025754.2-201ENST00000606491 432 ntBASIC4.78□□□□□ -1.64
USP46P62068 AC091979.2-201ENST00000607514 214 ntBASIC4.78□□□□□ -1.64
USP46P62068 AL773545.4-201ENST00000637262 310 ntBASIC4.78□□□□□ -1.64
USP46P62068 AL513478.4-201ENST00000641636 310 ntBASIC4.78□□□□□ -1.64
USP46P62068 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
USP46P62068 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.78□□□□□ -1.64
USP46P62068 AC092435.4-201ENST00000623012 4159 ntBASIC4.78□□□□□ -1.64
USP46P62068 AC087190.4-201ENST00000574616 8334 ntBASIC4.78□□□□□ -1.64
USP46P62068 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.65
USP46P62068 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
USP46P62068 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.77□□□□□ -1.65
USP46P62068 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.77□□□□□ -1.65
USP46P62068 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USP46P62068 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP46P62068 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
USP46P62068 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.77□□□□□ -1.65
USP46P62068 Y_RNA.40-201ENST00000362645 93 ntBASIC4.77□□□□□ -1.65
USP46P62068 RNA5SP189-201ENST00000364920 115 ntBASIC4.77□□□□□ -1.65
USP46P62068 RNU6-1279P-201ENST00000383917 103 ntBASIC4.77□□□□□ -1.65
USP46P62068 RNU6-144P-201ENST00000383951 107 ntBASIC4.77□□□□□ -1.65
USP46P62068 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.77□□□□□ -1.65
USP46P62068 AC091390.1-201ENST00000433904 331 ntBASIC4.77□□□□□ -1.65
USP46P62068 RPS26P2-201ENST00000440331 348 ntBASIC4.77□□□□□ -1.65
USP46P62068 HSPE1P13-201ENST00000451143 297 ntBASIC4.77□□□□□ -1.65
USP46P62068 AC016925.1-201ENST00000458303 298 ntBASIC4.77□□□□□ -1.65
USP46P62068 AC010469.1-201ENST00000463864 576 ntBASIC4.77□□□□□ -1.65
USP46P62068 AC145146.1-201ENST00000496370 254 ntBASIC4.77□□□□□ -1.65
USP46P62068 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
USP46P62068 AC006445.2-201ENST00000510061 472 ntBASIC4.77□□□□□ -1.65
USP46P62068 AC005921.1-201ENST00000510589 286 ntBASIC4.77□□□□□ -1.65
USP46P62068 RNU5E-3P-201ENST00000515913 68 ntBASIC4.77□□□□□ -1.65
USP46P62068 AC090142.3-201ENST00000519012 385 ntBASIC4.77□□□□□ -1.65
USP46P62068 RPL23AP97-201ENST00000568955 471 ntBASIC4.77□□□□□ -1.65
USP46P62068 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.77□□□□□ -1.65
USP46P62068 RPS15AP11-201ENST00000594193 385 ntBASIC4.77□□□□□ -1.65
USP46P62068 AP005019.3-201ENST00000620418 560 ntBASIC4.77□□□□□ -1.65
USP46P62068 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
USP46P62068 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP46P62068 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.77□□□□□ -1.65
USP46P62068 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP46P62068 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms