Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.07□□□□□ -2.24
ACTBP60709 AC084290.1-201ENST00000434995 374 ntBASIC1.07□□□□□ -2.24
ACTBP60709 MTND5P2-201ENST00000442927 1142 ntBASIC1.07□□□□□ -2.24
ACTBP60709 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.07□□□□□ -2.24
ACTBP60709 MTATP6P14-201ENST00000455189 673 ntBASIC1.07□□□□□ -2.24
ACTBP60709 SNRPFP4-201ENST00000456366 242 ntBASIC1.07□□□□□ -2.24
ACTBP60709 DUXAP8-207ENST00000456786 622 ntBASIC1.07□□□□□ -2.24
ACTBP60709 RNU1-131P-201ENST00000458943 161 ntBASIC1.07□□□□□ -2.24
ACTBP60709 RNU7-95P-201ENST00000459222 64 ntBASIC1.07□□□□□ -2.24
ACTBP60709 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.07□□□□□ -2.24
ACTBP60709 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.07□□□□□ -2.24
ACTBP60709 Y_RNA.676-201ENST00000516393 96 ntBASIC1.07□□□□□ -2.24
ACTBP60709 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.07□□□□□ -2.24
ACTBP60709 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.07□□□□□ -2.24
ACTBP60709 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.07□□□□□ -2.24
ACTBP60709 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.07□□□□□ -2.24
ACTBP60709 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.07□□□□□ -2.24
ACTBP60709 SNORA77B-201ENST00000578179 125 ntBASIC1.07□□□□□ -2.24
ACTBP60709 DEFB131E-202ENST00000602581 683 ntBASIC1.07□□□□□ -2.24
ACTBP60709 RNU4-5P-201ENST00000607255 135 ntBASIC1.07□□□□□ -2.24
ACTBP60709 AL139418.1-201ENST00000613613 177 ntBASIC1.07□□□□□ -2.24
ACTBP60709 AL157834.3-201ENST00000615543 103 ntBASIC1.07□□□□□ -2.24
ACTBP60709 AL590240.4-201ENST00000616908 390 ntBASIC1.07□□□□□ -2.24
ACTBP60709 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.07□□□□□ -2.24
ACTBP60709 AC103706.2-201ENST00000638080 240 ntBASIC1.07□□□□□ -2.24
ACTBP60709 AL391987.6-201ENST00000305671 199 ntBASIC1.06□□□□□ -2.24
ACTBP60709 MIR302D-201ENST00000362275 68 ntBASIC1.06□□□□□ -2.24
ACTBP60709 SNORD56.1-201ENST00000362913 68 ntBASIC1.06□□□□□ -2.24
ACTBP60709 RNU6-112P-201ENST00000363599 104 ntBASIC1.06□□□□□ -2.24
ACTBP60709 SNORD32B-201ENST00000364460 84 ntBASIC1.06□□□□□ -2.24
ACTBP60709 EEF1A1P40-201ENST00000412883 573 ntBASIC1.06□□□□□ -2.24
ACTBP60709 AP1B1P2-201ENST00000416196 106 ntBASIC1.06□□□□□ -2.24
ACTBP60709 AC092648.1-201ENST00000425870 423 ntBASIC1.06□□□□□ -2.24
ACTBP60709 HMGB1P31-201ENST00000437242 427 ntBASIC1.06□□□□□ -2.24
ACTBP60709 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.06□□□□□ -2.24
ACTBP60709 RPL30P12-201ENST00000474666 353 ntBASIC1.06□□□□□ -2.24
ACTBP60709 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.06□□□□□ -2.24
ACTBP60709 RNU1-86P-201ENST00000516108 154 ntBASIC1.06□□□□□ -2.24
ACTBP60709 RNU1-107P-201ENST00000516617 154 ntBASIC1.06□□□□□ -2.24
ACTBP60709 RNA5SP337-201ENST00000517007 109 ntBASIC1.06□□□□□ -2.24
ACTBP60709 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.06□□□□□ -2.24
ACTBP60709 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.06□□□□□ -2.24
ACTBP60709 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.06□□□□□ -2.24
ACTBP60709 ZNF519P3-201ENST00000557158 1032 ntBASIC1.06□□□□□ -2.24
ACTBP60709 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.06□□□□□ -2.24
ACTBP60709 AC063943.3-201ENST00000615562 356 ntBASIC1.06□□□□□ -2.24
ACTBP60709 RMST_4.1-201ENST00000616886 107 ntBASIC1.06□□□□□ -2.24
ACTBP60709 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.06□□□□□ -2.24
ACTBP60709 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
ACTBP60709 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
ACTBP60709 RNU6-78P-201ENST00000362897 107 ntBASIC1.05□□□□□ -2.24
ACTBP60709 RNU6-83P-201ENST00000384568 112 ntBASIC1.05□□□□□ -2.24
ACTBP60709 RNU6-296P-201ENST00000384608 107 ntBASIC1.05□□□□□ -2.24
ACTBP60709 RNU6-1179P-201ENST00000384667 107 ntBASIC1.05□□□□□ -2.24
ACTBP60709 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.05□□□□□ -2.24
ACTBP60709 AC004965.1-201ENST00000413033 213 ntBASIC1.05□□□□□ -2.24
ACTBP60709 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
ACTBP60709 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.05□□□□□ -2.24
ACTBP60709 TOMM22P2-201ENST00000430735 237 ntBASIC1.05□□□□□ -2.24
ACTBP60709 AL135790.2-201ENST00000437701 267 ntBASIC1.05□□□□□ -2.24
ACTBP60709 AC130509.1-201ENST00000464158 433 ntBASIC1.05□□□□□ -2.24
ACTBP60709 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.05□□□□□ -2.24
ACTBP60709 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.05□□□□□ -2.24
ACTBP60709 AP003033.1-201ENST00000527244 415 ntBASIC1.05□□□□□ -2.24
ACTBP60709 AC012414.6-201ENST00000568241 401 ntBASIC1.05□□□□□ -2.24
ACTBP60709 MIR4421-201ENST00000578133 69 ntBASIC1.05□□□□□ -2.24
ACTBP60709 AC018889.1-201ENST00000605372 397 ntBASIC1.05□□□□□ -2.24
ACTBP60709 AL359821.1-201ENST00000605519 182 ntBASIC1.05□□□□□ -2.24
ACTBP60709 AP000654.2-201ENST00000605633 586 ntBASIC1.05□□□□□ -2.24
ACTBP60709 AL139286.2-201ENST00000606838 396 ntBASIC1.05□□□□□ -2.24
ACTBP60709 AC131159.1-201ENST00000621854 213 ntBASIC1.05□□□□□ -2.24
ACTBP60709 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
ACTBP60709 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.05□□□□□ -2.24
ACTBP60709 MTND5P9-201ENST00000503854 1755 ntBASIC1.05□□□□□ -2.24
ACTBP60709 ICE2P2-201ENST00000483823 2787 ntBASIC1.04□□□□□ -2.24
ACTBP60709 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
ACTBP60709 SNORD56.2-201ENST00000363242 71 ntBASIC1.04□□□□□ -2.24
ACTBP60709 Y_RNA.164-201ENST00000363709 102 ntBASIC1.04□□□□□ -2.24
ACTBP60709 SNORA7.1-201ENST00000363750 139 ntBASIC1.04□□□□□ -2.24
ACTBP60709 RNU6-371P-201ENST00000364283 108 ntBASIC1.04□□□□□ -2.24
ACTBP60709 MIR122-201ENST00000385044 85 ntBASIC1.04□□□□□ -2.24
ACTBP60709 RAP1BP3-201ENST00000407180 549 ntBASIC1.04□□□□□ -2.24
ACTBP60709 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.04□□□□□ -2.24
ACTBP60709 RPS15AP12-201ENST00000419498 388 ntBASIC1.04□□□□□ -2.24
ACTBP60709 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.04□□□□□ -2.24
ACTBP60709 AL591704.2-201ENST00000421658 181 ntBASIC1.04□□□□□ -2.24
ACTBP60709 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.04□□□□□ -2.24
ACTBP60709 MTND1P20-201ENST00000430341 950 ntBASIC1.04□□□□□ -2.24
ACTBP60709 MTND1P30-201ENST00000441241 901 ntBASIC1.04□□□□□ -2.24
ACTBP60709 RPL39P29-201ENST00000447779 157 ntBASIC1.04□□□□□ -2.24
ACTBP60709 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.04□□□□□ -2.24
ACTBP60709 MTCO2P29-201ENST00000465212 189 ntBASIC1.04□□□□□ -2.24
ACTBP60709 AC079140.2-201ENST00000506193 142 ntBASIC1.04□□□□□ -2.24
ACTBP60709 MTND2P33-201ENST00000506452 1031 ntBASIC1.04□□□□□ -2.24
ACTBP60709 RNU5F-2P-201ENST00000516066 82 ntBASIC1.04□□□□□ -2.24
ACTBP60709 RNU6-123P-201ENST00000516163 102 ntBASIC1.04□□□□□ -2.24
ACTBP60709 RNU7-40P-201ENST00000516397 64 ntBASIC1.04□□□□□ -2.24
ACTBP60709 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.04□□□□□ -2.24
ACTBP60709 MTND2P7-201ENST00000521337 640 ntBASIC1.04□□□□□ -2.24
ACTBP60709 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms