Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MTND1P35-201ENST00000526739 508 ntBASIC3.1□□□□□ -1.91
RHBDL3P58872 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.1□□□□□ -1.91
RHBDL3P58872 AC103996.1-201ENST00000555468 102 ntBASIC3.1□□□□□ -1.91
RHBDL3P58872 MIR3136-201ENST00000583498 78 ntBASIC3.1□□□□□ -1.91
RHBDL3P58872 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.1□□□□□ -1.91
RHBDL3P58872 AC090517.3-201ENST00000625170 141 ntBASIC3.1□□□□□ -1.91
RHBDL3P58872 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.1□□□□□ -1.91
RHBDL3P58872 AP006437.1-201ENST00000641440 3685 ntBASIC3.1□□□□□ -1.91
RHBDL3P58872 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.1□□□□□ -1.91
RHBDL3P58872 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.91
RHBDL3P58872 SNORD62.1-201ENST00000362541 86 ntBASIC3.09□□□□□ -1.91
RHBDL3P58872 RNU6-451P-201ENST00000362921 107 ntBASIC3.09□□□□□ -1.91
RHBDL3P58872 RNA5SP393-201ENST00000363423 117 ntBASIC3.09□□□□□ -1.91
RHBDL3P58872 RNU4-56P-201ENST00000364700 142 ntBASIC3.09□□□□□ -1.91
RHBDL3P58872 SNORA67.1-201ENST00000364749 141 ntBASIC3.09□□□□□ -1.91
RHBDL3P58872 RNU6-877P-201ENST00000383868 107 ntBASIC3.09□□□□□ -1.91
RHBDL3P58872 RNU1-138P-201ENST00000384093 164 ntBASIC3.09□□□□□ -1.91
RHBDL3P58872 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.09□□□□□ -1.91
RHBDL3P58872 USP9YP18-201ENST00000425912 695 ntBASIC3.09□□□□□ -1.91
RHBDL3P58872 AL359672.1-201ENST00000442302 409 ntBASIC3.09□□□□□ -1.91
RHBDL3P58872 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.09□□□□□ -1.91
RHBDL3P58872 AC241585.2-209ENST00000638217 143 ntBASIC3.09□□□□□ -1.91
RHBDL3P58872 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.08□□□□□ -1.92
RHBDL3P58872 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RHBDL3P58872 Y_RNA.100-201ENST00000363141 102 ntBASIC3.08□□□□□ -1.92
RHBDL3P58872 AL590004.2-201ENST00000404787 371 ntBASIC3.08□□□□□ -1.92
RHBDL3P58872 RNA5SP118-201ENST00000410385 109 ntBASIC3.08□□□□□ -1.92
RHBDL3P58872 BMS1P22-201ENST00000414726 313 ntBASIC3.08□□□□□ -1.92
RHBDL3P58872 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.08□□□□□ -1.92
RHBDL3P58872 AC078809.1-201ENST00000427601 140 ntBASIC3.08□□□□□ -1.92
RHBDL3P58872 SRIP2-201ENST00000428470 166 ntBASIC3.08□□□□□ -1.92
RHBDL3P58872 AL139109.1-201ENST00000455491 297 ntBASIC3.08□□□□□ -1.92
RHBDL3P58872 AP000852.1-201ENST00000472460 573 ntBASIC3.08□□□□□ -1.92
RHBDL3P58872 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.08□□□□□ -1.92
RHBDL3P58872 SRIP1-201ENST00000489235 288 ntBASIC3.08□□□□□ -1.92
RHBDL3P58872 AC114801.2-201ENST00000503825 781 ntBASIC3.08□□□□□ -1.92
RHBDL3P58872 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.08□□□□□ -1.92
RHBDL3P58872 CBX3P7-201ENST00000532876 502 ntBASIC3.08□□□□□ -1.92
RHBDL3P58872 AP000763.2-201ENST00000540641 163 ntBASIC3.08□□□□□ -1.92
RHBDL3P58872 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.08□□□□□ -1.92
RHBDL3P58872 MIR5692C1-201ENST00000585309 91 ntBASIC3.08□□□□□ -1.92
RHBDL3P58872 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RHBDL3P58872 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
RHBDL3P58872 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.07□□□□□ -1.92
RHBDL3P58872 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.07□□□□□ -1.92
RHBDL3P58872 Y_RNA.38-201ENST00000362617 102 ntBASIC3.07□□□□□ -1.92
RHBDL3P58872 Y_RNA.40-201ENST00000362645 93 ntBASIC3.07□□□□□ -1.92
RHBDL3P58872 RNU6-522P-201ENST00000364497 107 ntBASIC3.07□□□□□ -1.92
RHBDL3P58872 U3.13-201ENST00000364804 214 ntBASIC3.07□□□□□ -1.92
RHBDL3P58872 RNU6-128P-201ENST00000383976 107 ntBASIC3.07□□□□□ -1.92
RHBDL3P58872 MIR27B-201ENST00000385129 97 ntBASIC3.07□□□□□ -1.92
RHBDL3P58872 OOSP1P1-201ENST00000423265 274 ntBASIC3.07□□□□□ -1.92
RHBDL3P58872 AC011753.1-201ENST00000451001 220 ntBASIC3.07□□□□□ -1.92
RHBDL3P58872 U8.21-201ENST00000459536 136 ntBASIC3.07□□□□□ -1.92
RHBDL3P58872 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.07□□□□□ -1.92
RHBDL3P58872 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.07□□□□□ -1.92
RHBDL3P58872 MIR5194-201ENST00000582634 120 ntBASIC3.07□□□□□ -1.92
RHBDL3P58872 AC068790.6-201ENST00000602558 258 ntBASIC3.07□□□□□ -1.92
RHBDL3P58872 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RHBDL3P58872 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
RHBDL3P58872 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RHBDL3P58872 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
RHBDL3P58872 AC092268.1-201ENST00000342691 405 ntBASIC3.06□□□□□ -1.92
RHBDL3P58872 RNA5SP289-201ENST00000362332 137 ntBASIC3.06□□□□□ -1.92
RHBDL3P58872 RNU6-1285P-201ENST00000363480 105 ntBASIC3.06□□□□□ -1.92
RHBDL3P58872 RNU6-1090P-201ENST00000364065 94 ntBASIC3.06□□□□□ -1.92
RHBDL3P58872 RNU1-52P-201ENST00000384190 164 ntBASIC3.06□□□□□ -1.92
RHBDL3P58872 RNU6-43P-201ENST00000384302 107 ntBASIC3.06□□□□□ -1.92
RHBDL3P58872 Y_RNA.530-201ENST00000384587 101 ntBASIC3.06□□□□□ -1.92
RHBDL3P58872 RN7SKP61-201ENST00000410642 295 ntBASIC3.06□□□□□ -1.92
RHBDL3P58872 RNA5SP508-201ENST00000411327 119 ntBASIC3.06□□□□□ -1.92
RHBDL3P58872 USP9YP20-201ENST00000419224 558 ntBASIC3.06□□□□□ -1.92
RHBDL3P58872 UBE2V1P4-201ENST00000425374 344 ntBASIC3.06□□□□□ -1.92
RHBDL3P58872 SNAP23P1-201ENST00000433229 246 ntBASIC3.06□□□□□ -1.92
RHBDL3P58872 NDUFA5P4-201ENST00000436704 385 ntBASIC3.06□□□□□ -1.92
RHBDL3P58872 RNU1-41P-201ENST00000516161 162 ntBASIC3.06□□□□□ -1.92
RHBDL3P58872 RNU1-48P-201ENST00000516400 162 ntBASIC3.06□□□□□ -1.92
RHBDL3P58872 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.06□□□□□ -1.92
RHBDL3P58872 AC025423.5-201ENST00000550230 219 ntBASIC3.06□□□□□ -1.92
RHBDL3P58872 AC100830.2-201ENST00000581636 240 ntBASIC3.06□□□□□ -1.92
RHBDL3P58872 BNIP3P25-201ENST00000596023 559 ntBASIC3.06□□□□□ -1.92
RHBDL3P58872 AL121757.2-201ENST00000611223 313 ntBASIC3.06□□□□□ -1.92
RHBDL3P58872 AC090517.2-201ENST00000614966 680 ntBASIC3.06□□□□□ -1.92
RHBDL3P58872 AL590808.1-201ENST00000618696 141 ntBASIC3.06□□□□□ -1.92
RHBDL3P58872 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RHBDL3P58872 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RHBDL3P58872 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
RHBDL3P58872 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RHBDL3P58872 SNORD113-7-201ENST00000363762 77 ntBASIC3.05□□□□□ -1.92
RHBDL3P58872 SNORA51.4-201ENST00000364993 124 ntBASIC3.05□□□□□ -1.92
RHBDL3P58872 RNU6-1329P-201ENST00000365664 107 ntBASIC3.05□□□□□ -1.92
RHBDL3P58872 RNU6-692P-201ENST00000384496 107 ntBASIC3.05□□□□□ -1.92
RHBDL3P58872 Y_RNA.554-201ENST00000384672 102 ntBASIC3.05□□□□□ -1.92
RHBDL3P58872 AF274854.1-201ENST00000413236 615 ntBASIC3.05□□□□□ -1.92
RHBDL3P58872 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.05□□□□□ -1.92
RHBDL3P58872 AC244670.1-201ENST00000436879 112 ntBASIC3.05□□□□□ -1.92
RHBDL3P58872 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.05□□□□□ -1.92
RHBDL3P58872 HMGN2P26-201ENST00000463169 339 ntBASIC3.05□□□□□ -1.92
RHBDL3P58872 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.05□□□□□ -1.92
RHBDL3P58872 RN7SKP24-201ENST00000515888 284 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms