Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF144AP50876 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF144AP50876 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
RNF144AP50876 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF144AP50876 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
RNF144AP50876 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF144AP50876 RNU1-20P-201ENST00000363314 162 ntBASIC4.31□□□□□ -1.72
RNF144AP50876 AC068538.1-201ENST00000376856 336 ntBASIC4.31□□□□□ -1.72
RNF144AP50876 MIR550A3-201ENST00000390735 95 ntBASIC4.31□□□□□ -1.72
RNF144AP50876 AL590762.2-201ENST00000395798 571 ntBASIC4.31□□□□□ -1.72
RNF144AP50876 MIR921-201ENST00000401133 56 ntBASIC4.31□□□□□ -1.72
RNF144AP50876 AL512604.1-201ENST00000404812 257 ntBASIC4.31□□□□□ -1.72
RNF144AP50876 RNU6-383P-201ENST00000410864 94 ntBASIC4.31□□□□□ -1.72
RNF144AP50876 AL591419.1-201ENST00000427423 339 ntBASIC4.31□□□□□ -1.72
RNF144AP50876 AC027124.2-201ENST00000428249 105 ntBASIC4.31□□□□□ -1.72
RNF144AP50876 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF144AP50876 RN7SL41P-201ENST00000476144 297 ntBASIC4.31□□□□□ -1.72
RNF144AP50876 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF144AP50876 Y_RNA.694-201ENST00000516677 117 ntBASIC4.31□□□□□ -1.72
RNF144AP50876 HSPE1P5-201ENST00000561489 272 ntBASIC4.31□□□□□ -1.72
RNF144AP50876 AC025281.1-201ENST00000567026 265 ntBASIC4.31□□□□□ -1.72
RNF144AP50876 Mico1.1-201ENST00000611698 204 ntBASIC4.31□□□□□ -1.72
RNF144AP50876 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
RNF144AP50876 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF144AP50876 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
RNF144AP50876 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RNF144AP50876 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF144AP50876 ZNF137P-201ENST00000456718 1920 ntBASIC4.31□□□□□ -1.72
RNF144AP50876 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RNF144AP50876 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF144AP50876 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF144AP50876 RNA5SP28-201ENST00000363841 119 ntBASIC4.3□□□□□ -1.72
RNF144AP50876 RNU4-43P-201ENST00000410628 137 ntBASIC4.3□□□□□ -1.72
RNF144AP50876 RNA5SP146-201ENST00000410743 123 ntBASIC4.3□□□□□ -1.72
RNF144AP50876 AC068287.1-201ENST00000430283 295 ntBASIC4.3□□□□□ -1.72
RNF144AP50876 TOMM22P2-201ENST00000430735 237 ntBASIC4.3□□□□□ -1.72
RNF144AP50876 HSPE1P21-201ENST00000438283 308 ntBASIC4.3□□□□□ -1.72
RNF144AP50876 AC004386.2-201ENST00000441858 148 ntBASIC4.3□□□□□ -1.72
RNF144AP50876 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF144AP50876 SCARNA22-201ENST00000503991 125 ntBASIC4.3□□□□□ -1.72
RNF144AP50876 Y_RNA.692-201ENST00000516627 105 ntBASIC4.3□□□□□ -1.72
RNF144AP50876 AC133485.4-201ENST00000561835 220 ntBASIC4.3□□□□□ -1.72
RNF144AP50876 AC105137.2-201ENST00000569073 466 ntBASIC4.3□□□□□ -1.72
RNF144AP50876 AC138907.4-201ENST00000570107 226 ntBASIC4.3□□□□□ -1.72
RNF144AP50876 AC015912.2-201ENST00000571053 181 ntBASIC4.3□□□□□ -1.72
RNF144AP50876 MIR5582-201ENST00000579697 68 ntBASIC4.3□□□□□ -1.72
RNF144AP50876 TCL6_2.1-201ENST00000615162 119 ntBASIC4.3□□□□□ -1.72
RNF144AP50876 AC005562.2-201ENST00000618264 111 ntBASIC4.3□□□□□ -1.72
RNF144AP50876 CR381572.2-201ENST00000624852 397 ntBASIC4.3□□□□□ -1.72
RNF144AP50876 U6.115-201ENST00000636045 103 ntBASIC4.3□□□□□ -1.72
RNF144AP50876 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF144AP50876 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
RNF144AP50876 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
RNF144AP50876 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
RNF144AP50876 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF144AP50876 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
RNF144AP50876 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF144AP50876 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF144AP50876 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RNF144AP50876 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF144AP50876 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF144AP50876 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF144AP50876 RN7SKP103-201ENST00000363848 320 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 U3.15-201ENST00000365398 212 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 RNY3P5-201ENST00000384127 102 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 SNORA48.5-201ENST00000391143 135 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 HDGFP1-201ENST00000405943 252 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 Y_RNA.622-201ENST00000411091 108 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 AC004866.1-201ENST00000411748 78 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF144AP50876 AL365496.1-201ENST00000426885 215 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF144AP50876 AL772161.1-201ENST00000439130 476 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF144AP50876 Z75741.1-201ENST00000446793 314 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF144AP50876 RPS29P2-201ENST00000479278 136 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 AC146944.2-203ENST00000502493 354 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 AC139495.1-202ENST00000513164 354 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 SNORD33.1-201ENST00000516213 88 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 RNU1-6P-201ENST00000516290 144 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 RNU6-844P-201ENST00000517175 102 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 NDUFA5P6-201ENST00000542110 379 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 MIR5006-201ENST00000583027 110 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF144AP50876 AL034555.1-201ENST00000604816 211 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 AL670379.3-201ENST00000605040 251 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 AC091979.2-201ENST00000607514 214 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 PCGEM1.1-201ENST00000613431 131 ntBASIC4.29□□□□□ -1.72
RNF144AP50876 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
RNF144AP50876 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RNF144AP50876 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RNF144AP50876 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.28□□□□□ -1.72
RNF144AP50876 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.28□□□□□ -1.72
RNF144AP50876 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RNF144AP50876 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RNF144AP50876 RNU6-597P-201ENST00000365620 102 ntBASIC4.28□□□□□ -1.72
RNF144AP50876 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RNF144AP50876 MIR937-201ENST00000401271 86 ntBASIC4.28□□□□□ -1.72
RNF144AP50876 SNORA79-201ENST00000408376 140 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms