Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PRIM1P49642 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PRIM1P49642 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PRIM1P49642 AC134026.1-201ENST00000623249 2239 ntBASIC5.48□□□□□ -1.53
PRIM1P49642 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PRIM1P49642 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PRIM1P49642 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PRIM1P49642 NEAT1-202ENST00000501122 22743 ntBASIC5.48□□□□□ -1.53
PRIM1P49642 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PRIM1P49642 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PRIM1P49642 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.48□□□□□ -1.53
PRIM1P49642 RNU6-487P-201ENST00000365430 104 ntBASIC5.48□□□□□ -1.53
PRIM1P49642 RNU6-217P-201ENST00000384164 104 ntBASIC5.48□□□□□ -1.53
PRIM1P49642 SNORA20-201ENST00000384662 132 ntBASIC5.48□□□□□ -1.53
PRIM1P49642 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PRIM1P49642 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.48□□□□□ -1.53
PRIM1P49642 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC5.48□□□□□ -1.53
PRIM1P49642 RAC1P5-201ENST00000512182 576 ntBASIC5.48□□□□□ -1.53
PRIM1P49642 RNU6-436P-201ENST00000516171 114 ntBASIC5.48□□□□□ -1.53
PRIM1P49642 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.48□□□□□ -1.53
PRIM1P49642 LARP7P3-201ENST00000579888 337 ntBASIC5.48□□□□□ -1.53
PRIM1P49642 AL391261.4-201ENST00000616012 481 ntBASIC5.48□□□□□ -1.53
PRIM1P49642 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PRIM1P49642 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PRIM1P49642 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PRIM1P49642 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.48□□□□□ -1.53
PRIM1P49642 ADAM3A-203ENST00000461344 2157 ntBASIC5.48□□□□□ -1.53
PRIM1P49642 AC010329.5-201ENST00000623497 2174 ntBASIC5.48□□□□□ -1.53
PRIM1P49642 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.47□□□□□ -1.53
PRIM1P49642 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.47□□□□□ -1.53
PRIM1P49642 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PRIM1P49642 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PRIM1P49642 RNA5SP267-201ENST00000364893 126 ntBASIC5.47□□□□□ -1.53
PRIM1P49642 SNORA36A-201ENST00000384221 132 ntBASIC5.47□□□□□ -1.53
PRIM1P49642 MIR526A2-201ENST00000390198 65 ntBASIC5.47□□□□□ -1.53
PRIM1P49642 NDUFS5P4-201ENST00000412983 318 ntBASIC5.47□□□□□ -1.53
PRIM1P49642 RPL21P66-201ENST00000426566 466 ntBASIC5.47□□□□□ -1.53
PRIM1P49642 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC5.47□□□□□ -1.53
PRIM1P49642 U8.19-201ENST00000459095 133 ntBASIC5.47□□□□□ -1.53
PRIM1P49642 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC5.47□□□□□ -1.53
PRIM1P49642 FCF1P8-201ENST00000510322 597 ntBASIC5.47□□□□□ -1.53
PRIM1P49642 AC006499.6-201ENST00000511169 607 ntBASIC5.47□□□□□ -1.53
PRIM1P49642 AP001328.1-201ENST00000528550 176 ntBASIC5.47□□□□□ -1.53
PRIM1P49642 AC090049.2-201ENST00000550377 109 ntBASIC5.47□□□□□ -1.53
PRIM1P49642 AC090877.1-201ENST00000561418 344 ntBASIC5.47□□□□□ -1.53
PRIM1P49642 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.47□□□□□ -1.53
PRIM1P49642 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.47□□□□□ -1.53
PRIM1P49642 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.47□□□□□ -1.53
PRIM1P49642 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
PRIM1P49642 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
PRIM1P49642 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PRIM1P49642 RNA5SP307-201ENST00000362863 116 ntBASIC5.46□□□□□ -1.54
PRIM1P49642 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.46□□□□□ -1.54
PRIM1P49642 Y_RNA.293-201ENST00000364908 93 ntBASIC5.46□□□□□ -1.54
PRIM1P49642 RNU6-476P-201ENST00000384726 107 ntBASIC5.46□□□□□ -1.54
PRIM1P49642 MIR888-201ENST00000401186 77 ntBASIC5.46□□□□□ -1.54
PRIM1P49642 HMGB3P8-201ENST00000449709 577 ntBASIC5.46□□□□□ -1.54
PRIM1P49642 AP000705.1-201ENST00000454567 350 ntBASIC5.46□□□□□ -1.54
PRIM1P49642 SNORA31.23-201ENST00000517219 133 ntBASIC5.46□□□□□ -1.54
PRIM1P49642 CYP4A27P-201ENST00000567218 190 ntBASIC5.46□□□□□ -1.54
PRIM1P49642 AC009163.5-201ENST00000575421 637 ntBASIC5.46□□□□□ -1.54
PRIM1P49642 AC022655.2-201ENST00000577280 318 ntBASIC5.46□□□□□ -1.54
PRIM1P49642 MIR4679-2-201ENST00000578358 77 ntBASIC5.46□□□□□ -1.54
PRIM1P49642 MIR3136-201ENST00000583498 78 ntBASIC5.46□□□□□ -1.54
PRIM1P49642 SNORA51-201ENST00000606420 132 ntBASIC5.46□□□□□ -1.54
PRIM1P49642 MIR7151-201ENST00000617477 60 ntBASIC5.46□□□□□ -1.54
PRIM1P49642 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PRIM1P49642 AC007546.2-201ENST00000623996 360 ntBASIC5.46□□□□□ -1.54
PRIM1P49642 MIR3658-201ENST00000636291 56 ntBASIC5.46□□□□□ -1.54
PRIM1P49642 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
PRIM1P49642 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
PRIM1P49642 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
PRIM1P49642 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PRIM1P49642 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
PRIM1P49642 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PRIM1P49642 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PRIM1P49642 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
PRIM1P49642 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PRIM1P49642 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.45□□□□□ -1.54
PRIM1P49642 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.45□□□□□ -1.54
PRIM1P49642 CUL1P1-201ENST00000509510 2425 ntBASIC5.45□□□□□ -1.54
PRIM1P49642 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PRIM1P49642 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC5.45□□□□□ -1.54
PRIM1P49642 DLEU2_6.3-201ENST00000340052 136 ntBASIC5.45□□□□□ -1.54
PRIM1P49642 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PRIM1P49642 RNU6-1298P-201ENST00000362456 101 ntBASIC5.45□□□□□ -1.54
PRIM1P49642 RNA5SP119-201ENST00000362715 117 ntBASIC5.45□□□□□ -1.54
PRIM1P49642 RNU6-270P-201ENST00000364131 105 ntBASIC5.45□□□□□ -1.54
PRIM1P49642 RN7SKP167-201ENST00000411047 285 ntBASIC5.45□□□□□ -1.54
PRIM1P49642 SNORA74C-2-201ENST00000411179 201 ntBASIC5.45□□□□□ -1.54
PRIM1P49642 AC006461.1-201ENST00000412637 326 ntBASIC5.45□□□□□ -1.54
PRIM1P49642 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC5.45□□□□□ -1.54
PRIM1P49642 RNU7-197P-201ENST00000458836 62 ntBASIC5.45□□□□□ -1.54
PRIM1P49642 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.45□□□□□ -1.54
PRIM1P49642 AC127455.1-201ENST00000565496 145 ntBASIC5.45□□□□□ -1.54
PRIM1P49642 DLEU2_6.2-201ENST00000620994 136 ntBASIC5.45□□□□□ -1.54
PRIM1P49642 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.45□□□□□ -1.54
PRIM1P49642 FAM35BP-202ENST00000497389 3337 ntBASIC5.45□□□□□ -1.54
PRIM1P49642 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.45□□□□□ -1.54
PRIM1P49642 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms