Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.63□□□□□ -1.99
RXRGP48443 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.63□□□□□ -1.99
RXRGP48443 MIR3136-201ENST00000583498 78 ntBASIC2.63□□□□□ -1.99
RXRGP48443 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RXRGP48443 AC068792.1-201ENST00000621354 417 ntBASIC2.63□□□□□ -1.99
RXRGP48443 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.63□□□□□ -1.99
RXRGP48443 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.63□□□□□ -1.99
RXRGP48443 AC099654.12-201ENST00000639868 649 ntBASIC2.63□□□□□ -1.99
RXRGP48443 AP000560.1-201ENST00000624150 1937 ntBASIC2.63□□□□□ -1.99
RXRGP48443 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
RXRGP48443 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RXRGP48443 SNORA3A-201ENST00000364113 130 ntBASIC2.62□□□□□ -1.99
RXRGP48443 SNORA40.19-201ENST00000390846 128 ntBASIC2.62□□□□□ -1.99
RXRGP48443 RPS29P13-201ENST00000402041 169 ntBASIC2.62□□□□□ -1.99
RXRGP48443 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.62□□□□□ -1.99
RXRGP48443 EDDM3CP-201ENST00000415977 425 ntBASIC2.62□□□□□ -1.99
RXRGP48443 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.62□□□□□ -1.99
RXRGP48443 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.62□□□□□ -1.99
RXRGP48443 AC003982.1-202ENST00000469928 248 ntBASIC2.62□□□□□ -1.99
RXRGP48443 TRBV12-1-201ENST00000479785 344 ntBASIC2.62□□□□□ -1.99
RXRGP48443 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RXRGP48443 RNU6-1281P-201ENST00000516223 105 ntBASIC2.62□□□□□ -1.99
RXRGP48443 RNU6-506P-201ENST00000516553 94 ntBASIC2.62□□□□□ -1.99
RXRGP48443 RNU6-314P-201ENST00000516574 104 ntBASIC2.62□□□□□ -1.99
RXRGP48443 AC034114.1-201ENST00000520293 285 ntBASIC2.62□□□□□ -1.99
RXRGP48443 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.62□□□□□ -1.99
RXRGP48443 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.62□□□□□ -1.99
RXRGP48443 AC007375.1-201ENST00000554513 578 ntBASIC2.62□□□□□ -1.99
RXRGP48443 AC103996.1-201ENST00000555468 102 ntBASIC2.62□□□□□ -1.99
RXRGP48443 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.62□□□□□ -1.99
RXRGP48443 AC060766.3-201ENST00000591442 263 ntBASIC2.62□□□□□ -1.99
RXRGP48443 AC012557.2-201ENST00000605919 418 ntBASIC2.62□□□□□ -1.99
RXRGP48443 AC103705.1-201ENST00000619013 241 ntBASIC2.62□□□□□ -1.99
RXRGP48443 AC241585.2-209ENST00000638217 143 ntBASIC2.62□□□□□ -1.99
RXRGP48443 RNU1-23P-201ENST00000363361 144 ntBASIC2.61□□□□□ -1.99
RXRGP48443 DEFA7P-201ENST00000382676 285 ntBASIC2.61□□□□□ -1.99
RXRGP48443 RNU6-1274P-201ENST00000384557 107 ntBASIC2.61□□□□□ -1.99
RXRGP48443 CALM2P3-201ENST00000400429 449 ntBASIC2.61□□□□□ -1.99
RXRGP48443 AL591034.2-201ENST00000402839 359 ntBASIC2.61□□□□□ -1.99
RXRGP48443 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.61□□□□□ -1.99
RXRGP48443 IFNA11P-201ENST00000446352 526 ntBASIC2.61□□□□□ -1.99
RXRGP48443 AC245102.2-201ENST00000448956 180 ntBASIC2.61□□□□□ -1.99
RXRGP48443 CCDC34P1-201ENST00000507441 517 ntBASIC2.61□□□□□ -1.99
RXRGP48443 HMGB1P33-201ENST00000563485 527 ntBASIC2.61□□□□□ -1.99
RXRGP48443 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.61□□□□□ -1.99
RXRGP48443 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
RXRGP48443 SNRPGP17-201ENST00000603780 214 ntBASIC2.61□□□□□ -1.99
RXRGP48443 AL357078.3-201ENST00000607528 618 ntBASIC2.61□□□□□ -1.99
RXRGP48443 AC087241.4-201ENST00000612441 480 ntBASIC2.61□□□□□ -1.99
RXRGP48443 CTSLP2-204ENST00000629029 392 ntBASIC2.61□□□□□ -1.99
RXRGP48443 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.6□□□□□ -1.99
RXRGP48443 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
RXRGP48443 AC069528.2-201ENST00000624849 1991 ntBASIC2.6□□□□□ -1.99
RXRGP48443 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.6□□□□□ -1.99
RXRGP48443 RNU4-40P-201ENST00000364351 143 ntBASIC2.6□□□□□ -1.99
RXRGP48443 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.6□□□□□ -1.99
RXRGP48443 AL590002.1-201ENST00000406554 418 ntBASIC2.6□□□□□ -1.99
RXRGP48443 AL121890.1-201ENST00000435457 205 ntBASIC2.6□□□□□ -1.99
RXRGP48443 AC244670.1-201ENST00000436879 112 ntBASIC2.6□□□□□ -1.99
RXRGP48443 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.6□□□□□ -1.99
RXRGP48443 MTCO2P3-201ENST00000442543 421 ntBASIC2.6□□□□□ -1.99
RXRGP48443 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.6□□□□□ -1.99
RXRGP48443 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.6□□□□□ -1.99
RXRGP48443 RNU6-1037P-201ENST00000459571 107 ntBASIC2.6□□□□□ -1.99
RXRGP48443 AC016632.1-201ENST00000503994 196 ntBASIC2.6□□□□□ -1.99
RXRGP48443 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.6□□□□□ -1.99
RXRGP48443 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.6□□□□□ -1.99
RXRGP48443 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.6□□□□□ -1.99
RXRGP48443 SNORA19.2-201ENST00000516013 114 ntBASIC2.6□□□□□ -1.99
RXRGP48443 RNU1-41P-201ENST00000516161 162 ntBASIC2.6□□□□□ -1.99
RXRGP48443 RNU1-48P-201ENST00000516400 162 ntBASIC2.6□□□□□ -1.99
RXRGP48443 RNA5SP137-201ENST00000516833 135 ntBASIC2.6□□□□□ -1.99
RXRGP48443 RNU6-667P-201ENST00000517186 102 ntBASIC2.6□□□□□ -1.99
RXRGP48443 RNU6-323P-201ENST00000521915 107 ntBASIC2.6□□□□□ -1.99
RXRGP48443 AC022616.8-201ENST00000533569 253 ntBASIC2.6□□□□□ -1.99
RXRGP48443 HSPE1P4-201ENST00000550617 308 ntBASIC2.6□□□□□ -1.99
RXRGP48443 RPS3AP23-202ENST00000574601 686 ntBASIC2.6□□□□□ -1.99
RXRGP48443 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.6□□□□□ -1.99
RXRGP48443 AC005046.1-201ENST00000608515 625 ntBASIC2.6□□□□□ -1.99
RXRGP48443 DISC2.1-201ENST00000612827 205 ntBASIC2.6□□□□□ -1.99
RXRGP48443 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.6□□□□□ -1.99
RXRGP48443 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
RXRGP48443 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.6□□□□□ -1.99
RXRGP48443 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RXRGP48443 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.6□□□□□ -1.99
RXRGP48443 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RXRGP48443 RNU6-38P-201ENST00000384085 107 ntBASIC2.59□□□□□ -1.99
RXRGP48443 SNORA70B-201ENST00000384210 135 ntBASIC2.59□□□□□ -1.99
RXRGP48443 RNU6-43P-201ENST00000384302 107 ntBASIC2.59□□□□□ -1.99
RXRGP48443 RNU6-692P-201ENST00000384496 107 ntBASIC2.59□□□□□ -1.99
RXRGP48443 MIR1261-201ENST00000408659 82 ntBASIC2.59□□□□□ -1.99
RXRGP48443 RNA5SP181-201ENST00000410246 98 ntBASIC2.59□□□□□ -1.99
RXRGP48443 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.59□□□□□ -1.99
RXRGP48443 AC078809.1-201ENST00000427601 140 ntBASIC2.59□□□□□ -1.99
RXRGP48443 CBX3P6-201ENST00000430257 527 ntBASIC2.59□□□□□ -1.99
RXRGP48443 DLGAP5P1-201ENST00000430307 464 ntBASIC2.59□□□□□ -1.99
RXRGP48443 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.59□□□□□ -1.99
RXRGP48443 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.59□□□□□ -1.99
RXRGP48443 CR769767.1-201ENST00000436337 346 ntBASIC2.59□□□□□ -1.99
RXRGP48443 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms