Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AIG1P1-201ENST00000503376 148 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 AC116337.1-201ENST00000509680 687 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 RPL39P5-202ENST00000512505 151 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.34□□□□□ -2.03
NKX2-1P43699 AC016256.1-201ENST00000547971 354 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.34□□□□□ -2.03
NKX2-1P43699 MIR5680-201ENST00000577577 84 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 MIR4790-201ENST00000577799 79 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 AC105245.1-201ENST00000581934 244 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 MIR3199-1-201ENST00000582434 88 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 AC243960.4-201ENST00000600532 288 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 AC135776.4-201ENST00000624300 1904 ntBASIC2.34□□□□□ -2.04
NKX2-1P43699 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
NKX2-1P43699 MTND4P23-201ENST00000447723 1363 ntBASIC2.34□□□□□ -2.04
NKX2-1P43699 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
NKX2-1P43699 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.33□□□□□ -2.04
NKX2-1P43699 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
NKX2-1P43699 RNU6-527P-201ENST00000363425 104 ntBASIC2.33□□□□□ -2.04
NKX2-1P43699 RNU6-336P-201ENST00000364891 107 ntBASIC2.33□□□□□ -2.04
NKX2-1P43699 RNU6-827P-201ENST00000365553 106 ntBASIC2.33□□□□□ -2.04
NKX2-1P43699 RNU1-57P-201ENST00000384491 166 ntBASIC2.33□□□□□ -2.04
NKX2-1P43699 SNORD73A-201ENST00000386062 65 ntBASIC2.33□□□□□ -2.04
NKX2-1P43699 RPL37P10-201ENST00000412884 288 ntBASIC2.33□□□□□ -2.04
NKX2-1P43699 RPL30P4-201ENST00000429309 333 ntBASIC2.33□□□□□ -2.04
NKX2-1P43699 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.33□□□□□ -2.04
NKX2-1P43699 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.33□□□□□ -2.04
NKX2-1P43699 Y_RNA.635-201ENST00000459041 101 ntBASIC2.33□□□□□ -2.04
NKX2-1P43699 snoU13.22-201ENST00000459428 104 ntBASIC2.33□□□□□ -2.04
NKX2-1P43699 RPS29P27-201ENST00000463711 170 ntBASIC2.33□□□□□ -2.04
NKX2-1P43699 AC117440.1-201ENST00000474107 571 ntBASIC2.33□□□□□ -2.04
NKX2-1P43699 AC096576.1-201ENST00000489014 359 ntBASIC2.33□□□□□ -2.04
NKX2-1P43699 RPS27P27-201ENST00000498779 255 ntBASIC2.33□□□□□ -2.04
NKX2-1P43699 HPRT1P3-201ENST00000539521 576 ntBASIC2.33□□□□□ -2.04
NKX2-1P43699 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.33□□□□□ -2.04
NKX2-1P43699 AC078795.3-201ENST00000602913 472 ntBASIC2.33□□□□□ -2.04
NKX2-1P43699 AC018889.1-201ENST00000605372 397 ntBASIC2.33□□□□□ -2.04
NKX2-1P43699 AL161423.1-201ENST00000613700 262 ntBASIC2.33□□□□□ -2.04
NKX2-1P43699 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.33□□□□□ -2.04
NKX2-1P43699 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.33□□□□□ -2.04
NKX2-1P43699 Y_RNA.11-201ENST00000362375 109 ntBASIC2.32□□□□□ -2.04
NKX2-1P43699 RNU4-79P-201ENST00000362764 141 ntBASIC2.32□□□□□ -2.04
NKX2-1P43699 SNORD56.1-201ENST00000362913 68 ntBASIC2.32□□□□□ -2.04
NKX2-1P43699 VTRNA1-1-201ENST00000363120 99 ntBASIC2.32□□□□□ -2.04
NKX2-1P43699 RNU4-73P-201ENST00000363164 141 ntBASIC2.32□□□□□ -2.04
NKX2-1P43699 MIR34B-201ENST00000385076 84 ntBASIC2.32□□□□□ -2.04
NKX2-1P43699 RNA5SP120-201ENST00000410900 112 ntBASIC2.32□□□□□ -2.04
NKX2-1P43699 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.32□□□□□ -2.04
NKX2-1P43699 AC138623.1-201ENST00000418060 216 ntBASIC2.32□□□□□ -2.04
NKX2-1P43699 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.32□□□□□ -2.04
NKX2-1P43699 EIF4EP4-201ENST00000424916 578 ntBASIC2.32□□□□□ -2.04
NKX2-1P43699 RPL23AP95-201ENST00000426806 265 ntBASIC2.32□□□□□ -2.04
NKX2-1P43699 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.32□□□□□ -2.04
NKX2-1P43699 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.32□□□□□ -2.04
NKX2-1P43699 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.32□□□□□ -2.04
NKX2-1P43699 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.32□□□□□ -2.04
NKX2-1P43699 AC243964.1-201ENST00000441814 261 ntBASIC2.32□□□□□ -2.04
NKX2-1P43699 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.32□□□□□ -2.04
NKX2-1P43699 RNU7-152P-201ENST00000458982 64 ntBASIC2.32□□□□□ -2.04
NKX2-1P43699 AC112771.1-201ENST00000463581 102 ntBASIC2.32□□□□□ -2.04
NKX2-1P43699 PTP4A1P4-201ENST00000512479 322 ntBASIC2.32□□□□□ -2.04
NKX2-1P43699 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.32□□□□□ -2.04
NKX2-1P43699 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.32□□□□□ -2.04
NKX2-1P43699 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.32□□□□□ -2.04
NKX2-1P43699 AC090616.3-201ENST00000582184 217 ntBASIC2.32□□□□□ -2.04
NKX2-1P43699 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.32□□□□□ -2.04
NKX2-1P43699 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.32□□□□□ -2.04
NKX2-1P43699 AC124303.1-201ENST00000605703 360 ntBASIC2.32□□□□□ -2.04
NKX2-1P43699 MIR8076-201ENST00000611401 83 ntBASIC2.32□□□□□ -2.04
NKX2-1P43699 Y_RNA.804-201ENST00000615262 101 ntBASIC2.32□□□□□ -2.04
NKX2-1P43699 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.32□□□□□ -2.04
NKX2-1P43699 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.32□□□□□ -2.04
NKX2-1P43699 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NKX2-1P43699 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
NKX2-1P43699 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.31□□□□□ -2.04
NKX2-1P43699 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.31□□□□□ -2.04
NKX2-1P43699 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
NKX2-1P43699 MIR26A1-201ENST00000362205 77 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 RNU4-76P-201ENST00000364509 141 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 U8.8-201ENST00000365399 135 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NKX2-1P43699 RNU6-1222P-201ENST00000384615 107 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 MIR23B-201ENST00000384832 97 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
NKX2-1P43699 RNU6-220P-201ENST00000390919 107 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 MIR548F5-201ENST00000408421 86 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 RNU6-174P-201ENST00000410406 106 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 NUP35P1-201ENST00000422734 947 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 AL590632.1-201ENST00000424289 371 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.31□□□□□ -2.04
NKX2-1P43699 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.31□□□□□ -2.04
NKX2-1P43699 Z75741.1-201ENST00000446793 314 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 U8.21-201ENST00000459536 136 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 RPL9P9-202ENST00000466501 579 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 AC074250.1-201ENST00000511117 192 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 RN7SKP24-201ENST00000515888 284 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 RPPH1-2P-201ENST00000516688 293 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 RNU6-1016P-201ENST00000516689 94 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 AC004486.1-201ENST00000546846 233 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 AC023824.2-201ENST00000566185 400 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 159.3 ms