Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 SCARNA24.1-201ENST00000516465 137 ntBASIC1.6□□□□□ -2.15
TNFSF9P41273 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.6□□□□□ -2.15
TNFSF9P41273 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.6□□□□□ -2.15
TNFSF9P41273 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.6□□□□□ -2.15
TNFSF9P41273 MIR3913-1-201ENST00000577744 102 ntBASIC1.6□□□□□ -2.15
TNFSF9P41273 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.6□□□□□ -2.15
TNFSF9P41273 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TNFSF9P41273 BNIP3P25-201ENST00000596023 559 ntBASIC1.6□□□□□ -2.15
TNFSF9P41273 AL078605.1-201ENST00000603529 500 ntBASIC1.6□□□□□ -2.15
TNFSF9P41273 AC012409.4-201ENST00000612923 249 ntBASIC1.6□□□□□ -2.15
TNFSF9P41273 AC009878.1-201ENST00000621819 340 ntBASIC1.6□□□□□ -2.15
TNFSF9P41273 SCARNA4-202ENST00000625402 129 ntBASIC1.6□□□□□ -2.15
TNFSF9P41273 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
TNFSF9P41273 OR4G2P-201ENST00000328113 903 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 snoU2_19.1-201ENST00000362361 80 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 Y_RNA.40-201ENST00000362645 93 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 U3.4-201ENST00000363352 213 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 RNU6-944P-201ENST00000364023 107 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 RNY4P34-201ENST00000364779 95 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 RNU6-169P-201ENST00000365336 107 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 RNU6-611P-201ENST00000384276 104 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 MIR320A-201ENST00000385302 82 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 MIR1283-2-201ENST00000408621 87 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 RNU2-23P-201ENST00000410545 195 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.59□□□□□ -2.15
TNFSF9P41273 AC074117.2-201ENST00000417130 397 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.59□□□□□ -2.15
TNFSF9P41273 AL365203.2-201ENST00000423444 196 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.59□□□□□ -2.15
TNFSF9P41273 AC000111.3-201ENST00000433478 193 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 AC092473.1-201ENST00000441098 221 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 MTND2P4-201ENST00000445034 1004 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 RPL30P12-201ENST00000474666 353 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
TNFSF9P41273 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.59□□□□□ -2.15
TNFSF9P41273 PTP4A1P4-201ENST00000512479 322 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 SNORA31.24-201ENST00000517232 57 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.59□□□□□ -2.15
TNFSF9P41273 AC022878.1-201ENST00000530684 149 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.59□□□□□ -2.15
TNFSF9P41273 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.59□□□□□ -2.15
TNFSF9P41273 AC002400.1-201ENST00000569310 726 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 MIR3122-201ENST00000577243 73 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.59□□□□□ -2.15
TNFSF9P41273 SEPT7P9-203ENST00000604116 343 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 AL139286.2-201ENST00000606838 396 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 RNU6-87P-201ENST00000607561 108 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 AL451064.1-201ENST00000607718 471 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 AC091931.1-201ENST00000623488 728 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 AC093648.1-201ENST00000623546 606 ntBASIC1.59□□□□□ -2.15
TNFSF9P41273 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TNFSF9P41273 MTND4P4-201ENST00000439033 1366 ntBASIC1.59□□□□□ -2.16
TNFSF9P41273 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TNFSF9P41273 SNORD56.1-201ENST00000362913 68 ntBASIC1.58□□□□□ -2.16
TNFSF9P41273 SNORA24.1-201ENST00000384401 135 ntBASIC1.58□□□□□ -2.16
TNFSF9P41273 MIR578-201ENST00000384828 96 ntBASIC1.58□□□□□ -2.16
TNFSF9P41273 MIR597-201ENST00000384968 97 ntBASIC1.58□□□□□ -2.16
TNFSF9P41273 RNA5SP465-201ENST00000391195 109 ntBASIC1.58□□□□□ -2.16
TNFSF9P41273 RNA5SP212-201ENST00000391223 107 ntBASIC1.58□□□□□ -2.16
TNFSF9P41273 CBX3P9-201ENST00000402326 552 ntBASIC1.58□□□□□ -2.16
TNFSF9P41273 MIR1287-201ENST00000408492 90 ntBASIC1.58□□□□□ -2.16
TNFSF9P41273 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.58□□□□□ -2.16
TNFSF9P41273 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.58□□□□□ -2.16
TNFSF9P41273 MTATP6P16-201ENST00000434543 526 ntBASIC1.58□□□□□ -2.16
TNFSF9P41273 MTND2P29-201ENST00000438595 412 ntBASIC1.58□□□□□ -2.16
TNFSF9P41273 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.58□□□□□ -2.16
TNFSF9P41273 MTND1P30-201ENST00000441241 901 ntBASIC1.58□□□□□ -2.16
TNFSF9P41273 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.58□□□□□ -2.16
TNFSF9P41273 GAPDHP17-201ENST00000449858 1001 ntBASIC1.58□□□□□ -2.16
TNFSF9P41273 AC009474.2-201ENST00000451383 136 ntBASIC1.58□□□□□ -2.16
TNFSF9P41273 AC006026.2-201ENST00000457376 180 ntBASIC1.58□□□□□ -2.16
TNFSF9P41273 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.58□□□□□ -2.16
TNFSF9P41273 SNORA43.2-201ENST00000516652 128 ntBASIC1.58□□□□□ -2.16
TNFSF9P41273 AC022616.8-201ENST00000533569 253 ntBASIC1.58□□□□□ -2.16
TNFSF9P41273 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.58□□□□□ -2.16
TNFSF9P41273 BNIP3P6-201ENST00000549284 499 ntBASIC1.58□□□□□ -2.16
TNFSF9P41273 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.58□□□□□ -2.16
TNFSF9P41273 AP005136.1-201ENST00000579765 429 ntBASIC1.58□□□□□ -2.16
TNFSF9P41273 AC090897.2-201ENST00000581715 130 ntBASIC1.58□□□□□ -2.16
TNFSF9P41273 AL359999.1-201ENST00000604513 294 ntBASIC1.58□□□□□ -2.16
TNFSF9P41273 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.57□□□□□ -2.16
TNFSF9P41273 FARSBP1-201ENST00000435808 1778 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TNFSF9P41273 RNY1P10-201ENST00000363268 113 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 RNU6-282P-201ENST00000365357 103 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TNFSF9P41273 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
TNFSF9P41273 RNU6-641P-201ENST00000384006 107 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 SNORD14D-201ENST00000384390 87 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 BTF3L4P2-201ENST00000392798 346 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 RNA5SP390-201ENST00000410191 113 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 RPS3AP3-201ENST00000411933 242 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.57□□□□□ -2.16
TNFSF9P41273 AC004965.1-201ENST00000413033 213 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 C1DP2-201ENST00000418167 426 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 ELOCP4-201ENST00000420090 333 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 Z99497.1-201ENST00000421282 135 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.57□□□□□ -2.16
TNFSF9P41273 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms