Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 RN7SL271P-201ENST00000487601 295 ntBASIC5.58□□□□□ -1.52
CD44P16070 RPS27AP10-201ENST00000496103 208 ntBASIC5.58□□□□□ -1.52
CD44P16070 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC5.58□□□□□ -1.52
CD44P16070 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.58□□□□□ -1.52
CD44P16070 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.58□□□□□ -1.52
CD44P16070 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CD44P16070 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CD44P16070 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CD44P16070 AC112198.2-201ENST00000426589 6996 ntBASIC5.58□□□□□ -1.52
CD44P16070 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC5.58□□□□□ -1.52
CD44P16070 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CD44P16070 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CD44P16070 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CD44P16070 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.57□□□□□ -1.52
CD44P16070 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
CD44P16070 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CD44P16070 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CD44P16070 SNORD115-27-201ENST00000364430 82 ntBASIC5.57□□□□□ -1.52
CD44P16070 Y_RNA.410-201ENST00000383992 113 ntBASIC5.57□□□□□ -1.52
CD44P16070 SNORD14D-201ENST00000384390 87 ntBASIC5.57□□□□□ -1.52
CD44P16070 SNORA68.2-201ENST00000391263 128 ntBASIC5.57□□□□□ -1.52
CD44P16070 RPS29P9-201ENST00000440360 171 ntBASIC5.57□□□□□ -1.52
CD44P16070 HMGN2P10-201ENST00000448085 265 ntBASIC5.57□□□□□ -1.52
CD44P16070 AC106785.1-201ENST00000565935 262 ntBASIC5.57□□□□□ -1.52
CD44P16070 MIR4439-201ENST00000583746 80 ntBASIC5.57□□□□□ -1.52
CD44P16070 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC5.57□□□□□ -1.52
CD44P16070 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.57□□□□□ -1.52
CD44P16070 AC074140.1-201ENST00000621617 208 ntBASIC5.57□□□□□ -1.52
CD44P16070 Y_RNA.788-201ENST00000622394 112 ntBASIC5.57□□□□□ -1.52
CD44P16070 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
CD44P16070 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CD44P16070 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CD44P16070 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CD44P16070 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CD44P16070 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.56□□□□□ -1.52
CD44P16070 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
CD44P16070 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.56□□□□□ -1.52
CD44P16070 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CD44P16070 RN7SKP160-201ENST00000363804 340 ntBASIC5.56□□□□□ -1.52
CD44P16070 RN7SKP113-201ENST00000363891 295 ntBASIC5.56□□□□□ -1.52
CD44P16070 RN7SKP229-201ENST00000410465 302 ntBASIC5.56□□□□□ -1.52
CD44P16070 RNU6-141P-201ENST00000410499 105 ntBASIC5.56□□□□□ -1.52
CD44P16070 Y_RNA.609-201ENST00000410669 89 ntBASIC5.56□□□□□ -1.52
CD44P16070 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.56□□□□□ -1.52
CD44P16070 RPL34P20-201ENST00000442771 351 ntBASIC5.56□□□□□ -1.52
CD44P16070 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.56□□□□□ -1.52
CD44P16070 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.56□□□□□ -1.52
CD44P16070 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.56□□□□□ -1.52
CD44P16070 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.56□□□□□ -1.52
CD44P16070 IMMP1LP3-201ENST00000604197 224 ntBASIC5.56□□□□□ -1.52
CD44P16070 uc_338.13-201ENST00000618243 179 ntBASIC5.56□□□□□ -1.52
CD44P16070 AC005086.4-201ENST00000623065 213 ntBASIC5.56□□□□□ -1.52
CD44P16070 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CD44P16070 AL022311.1-201ENST00000623726 19416 ntBASIC5.56□□□□□ -1.52
CD44P16070 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CD44P16070 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CD44P16070 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC5.56□□□□□ -1.52
CD44P16070 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.56□□□□□ -1.52
CD44P16070 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CD44P16070 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD44P16070 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
CD44P16070 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD44P16070 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD44P16070 Y_RNA.205-201ENST00000364128 113 ntBASIC5.55□□□□□ -1.52
CD44P16070 SNORA70.10-201ENST00000384515 134 ntBASIC5.55□□□□□ -1.52
CD44P16070 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CD44P16070 SNORA7.5-201ENST00000410672 110 ntBASIC5.55□□□□□ -1.52
CD44P16070 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC5.55□□□□□ -1.52
CD44P16070 CHEK2P5-201ENST00000423877 246 ntBASIC5.55□□□□□ -1.52
CD44P16070 RBMY2UP-201ENST00000453474 324 ntBASIC5.55□□□□□ -1.52
CD44P16070 AP001486.1-201ENST00000463339 476 ntBASIC5.55□□□□□ -1.52
CD44P16070 RPS21P4-201ENST00000487122 248 ntBASIC5.55□□□□□ -1.52
CD44P16070 ENPP7P9-201ENST00000514456 627 ntBASIC5.55□□□□□ -1.52
CD44P16070 HSPE1P18-201ENST00000517602 280 ntBASIC5.55□□□□□ -1.52
CD44P16070 IGKV3D-34-201ENST00000522638 302 ntBASIC5.55□□□□□ -1.52
CD44P16070 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.55□□□□□ -1.52
CD44P16070 HSPE1P19-201ENST00000603327 295 ntBASIC5.55□□□□□ -1.52
CD44P16070 AL023881.1-201ENST00000621088 301 ntBASIC5.55□□□□□ -1.52
CD44P16070 AC012442.3-202ENST00000636742 206 ntBASIC5.55□□□□□ -1.52
CD44P16070 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD44P16070 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.55□□□□□ -1.52
CD44P16070 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CD44P16070 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CD44P16070 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CD44P16070 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.54□□□□□ -1.52
CD44P16070 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD44P16070 STX3-208ENST00000641815 3236 ntBASIC5.54□□□□□ -1.52
CD44P16070 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.54□□□□□ -1.52
CD44P16070 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD44P16070 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD44P16070 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CD44P16070 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD44P16070 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD44P16070 RNU6-1189P-201ENST00000383958 107 ntBASIC5.54□□□□□ -1.52
CD44P16070 snoU13.14-201ENST00000459372 104 ntBASIC5.54□□□□□ -1.52
CD44P16070 RNU6-221P-201ENST00000459541 99 ntBASIC5.54□□□□□ -1.52
CD44P16070 AC093729.1-201ENST00000513074 128 ntBASIC5.54□□□□□ -1.52
CD44P16070 IGKV2-18-201ENST00000522607 343 ntBASIC5.54□□□□□ -1.52
CD44P16070 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC5.54□□□□□ -1.52
CD44P16070 AL513534.2-201ENST00000603836 250 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms