Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
COL11A2P13942 RPL9P7-201ENST00000330965 580 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 MIR335-201ENST00000362173 94 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 RNU1-35P-201ENST00000362782 153 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 Y_RNA.276-201ENST00000364732 109 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 SNORA3.2-201ENST00000408221 125 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 RNA5SP274-201ENST00000410484 108 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 RNU2-38P-201ENST00000410856 79 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 RNU6-325P-201ENST00000411132 105 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.33□□□□□ -1.88
COL11A2P13942 AL513043.1-201ENST00000439124 535 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COL11A2P13942 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.33□□□□□ -1.88
COL11A2P13942 RPL9P9-202ENST00000466501 579 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.33□□□□□ -1.88
COL11A2P13942 RNU6-143P-201ENST00000516942 93 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 RN7SKP234-201ENST00000517173 224 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 IGKV3-31-201ENST00000523109 329 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 RRN3P3-201ENST00000549207 578 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 TRAV37-201ENST00000553906 342 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.33□□□□□ -1.88
COL11A2P13942 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.33□□□□□ -1.88
COL11A2P13942 SNORD53-201ENST00000579969 78 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 AL121917.1-203ENST00000605534 577 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.33□□□□□ -1.88
COL11A2P13942 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL11A2P13942 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL11A2P13942 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL11A2P13942 U8.2-201ENST00000363156 134 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 SNORA70E-201ENST00000384492 135 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 Y_RNA.533-201ENST00000384596 114 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 RNU6-178P-201ENST00000384631 104 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 RNU6-33P-201ENST00000384793 107 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 MIR512-1-201ENST00000384913 84 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 AL590399.6-201ENST00000446396 307 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 TRBVB-201ENST00000477100 408 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.33□□□□□ -1.88
COL11A2P13942 AC113155.1-201ENST00000511141 769 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 NDUFB4P9-201ENST00000511646 388 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 SNORD116-26-201ENST00000516006 96 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.33□□□□□ -1.88
COL11A2P13942 AL355877.2-201ENST00000603670 358 ntBASIC3.33□□□□□ -1.88
COL11A2P13942 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.33□□□□□ -1.88
COL11A2P13942 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL11A2P13942 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL11A2P13942 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL11A2P13942 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL11A2P13942 Y_RNA.48-201ENST00000362710 103 ntBASIC3.32□□□□□ -1.88
COL11A2P13942 Y_RNA.60-201ENST00000362831 98 ntBASIC3.32□□□□□ -1.88
COL11A2P13942 Y_RNA.471-201ENST00000384312 102 ntBASIC3.32□□□□□ -1.88
COL11A2P13942 MIR518C-201ENST00000384822 101 ntBASIC3.32□□□□□ -1.88
COL11A2P13942 RNU6-817P-201ENST00000391083 104 ntBASIC3.32□□□□□ -1.88
COL11A2P13942 SAR1AP2-201ENST00000392696 594 ntBASIC3.32□□□□□ -1.88
COL11A2P13942 AL513331.1-201ENST00000411908 397 ntBASIC3.32□□□□□ -1.88
COL11A2P13942 RPL23AP22-201ENST00000437556 453 ntBASIC3.32□□□□□ -1.88
COL11A2P13942 AC006539.3-201ENST00000454258 129 ntBASIC3.32□□□□□ -1.88
COL11A2P13942 snoU13.15-201ENST00000459407 104 ntBASIC3.32□□□□□ -1.88
COL11A2P13942 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.32□□□□□ -1.88
COL11A2P13942 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.32□□□□□ -1.88
COL11A2P13942 U6.104-201ENST00000637979 90 ntBASIC3.32□□□□□ -1.88
COL11A2P13942 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL11A2P13942 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
COL11A2P13942 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL11A2P13942 AC026523.2-201ENST00000625039 7739 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 U3.6-201ENST00000363622 211 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 Y_RNA.214-201ENST00000364201 112 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 RNU4-42P-201ENST00000364738 142 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 Y_RNA.461-201ENST00000384263 103 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 Y_RNA.785-201ENST00000384290 109 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 Y_RNA.526-201ENST00000384572 110 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 MIR578-201ENST00000384828 96 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
COL11A2P13942 AC112220.1-201ENST00000434628 355 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.31□□□□□ -1.88
COL11A2P13942 AL360271.2-201ENST00000447710 161 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 RPL7P5-201ENST00000471472 736 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 AC005921.1-201ENST00000510589 286 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 AC008716.1-201ENST00000511084 513 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 RNU6-406P-201ENST00000516470 107 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 Y_RNA.687-201ENST00000516558 91 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 SNORA64.4-201ENST00000516632 81 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 RNU6-897P-201ENST00000517135 105 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.31□□□□□ -1.88
COL11A2P13942 MIR1273C-201ENST00000578669 77 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 U73479.1-201ENST00000618062 168 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 MIR6715B-201ENST00000637172 77 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 LINC01355-201ENST00000566551 5444 ntBASIC3.31□□□□□ -1.88
COL11A2P13942 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL11A2P13942 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
COL11A2P13942 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.31□□□□□ -1.88
COL11A2P13942 Y_RNA.19-201ENST00000362462 99 ntBASIC3.3□□□□□ -1.88
COL11A2P13942 RNU6-37P-201ENST00000362692 107 ntBASIC3.3□□□□□ -1.88
COL11A2P13942 Y_RNA.117-201ENST00000363294 101 ntBASIC3.3□□□□□ -1.88
COL11A2P13942 RNU6-11P-201ENST00000364234 107 ntBASIC3.3□□□□□ -1.88
COL11A2P13942 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
COL11A2P13942 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.3□□□□□ -1.88
COL11A2P13942 RNU6-25P-201ENST00000383873 107 ntBASIC3.3□□□□□ -1.88
COL11A2P13942 RNU6-1-201ENST00000383898 107 ntBASIC3.3□□□□□ -1.88
COL11A2P13942 RNU6-76P-201ENST00000384060 104 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms