Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 MTND2P9-201ENST00000422293 931 ntBASIC0.35□□□□□ -2.35
CFTRP13569 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.35□□□□□ -2.35
CFTRP13569 GTF2IP3-201ENST00000433887 494 ntBASIC0.35□□□□□ -2.35
CFTRP13569 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.35□□□□□ -2.35
CFTRP13569 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.35□□□□□ -2.35
CFTRP13569 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.35□□□□□ -2.35
CFTRP13569 AC005741.1-201ENST00000511094 432 ntBASIC0.35□□□□□ -2.35
CFTRP13569 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.35□□□□□ -2.35
CFTRP13569 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CFTRP13569 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.35□□□□□ -2.35
CFTRP13569 AC090578.1-201ENST00000604955 591 ntBASIC0.35□□□□□ -2.35
CFTRP13569 AL365434.2-201ENST00000607979 234 ntBASIC0.35□□□□□ -2.35
CFTRP13569 TUG1_2.1-201ENST00000614234 87 ntBASIC0.35□□□□□ -2.35
CFTRP13569 RMST_4.1-201ENST00000616886 107 ntBASIC0.35□□□□□ -2.35
CFTRP13569 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.35□□□□□ -2.35
CFTRP13569 RNU6-223P-201ENST00000362830 107 ntBASIC0.35□□□□□ -2.35
CFTRP13569 Y_RNA.170-201ENST00000363746 110 ntBASIC0.35□□□□□ -2.35
CFTRP13569 RNU6-1300P-201ENST00000391046 108 ntBASIC0.35□□□□□ -2.35
CFTRP13569 DHFRP6-201ENST00000401776 268 ntBASIC0.35□□□□□ -2.35
CFTRP13569 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.35□□□□□ -2.35
CFTRP13569 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CFTRP13569 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.35□□□□□ -2.35
CFTRP13569 snoU13.8-201ENST00000458890 104 ntBASIC0.35□□□□□ -2.35
CFTRP13569 COX6CP6-201ENST00000490840 228 ntBASIC0.35□□□□□ -2.35
CFTRP13569 SNORA3.4-201ENST00000515969 96 ntBASIC0.35□□□□□ -2.35
CFTRP13569 RNU6-390P-201ENST00000516259 103 ntBASIC0.35□□□□□ -2.35
CFTRP13569 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.35□□□□□ -2.35
CFTRP13569 AC018630.3-201ENST00000542637 96 ntBASIC0.35□□□□□ -2.35
CFTRP13569 AC133794.1-201ENST00000602731 914 ntBASIC0.35□□□□□ -2.35
CFTRP13569 AL390208.1-201ENST00000605885 644 ntBASIC0.35□□□□□ -2.35
CFTRP13569 AL138726.1-201ENST00000614873 333 ntBASIC0.35□□□□□ -2.35
CFTRP13569 AC009032.1-201ENST00000617574 431 ntBASIC0.35□□□□□ -2.35
CFTRP13569 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CFTRP13569 AC068647.2-201ENST00000637380 353 ntBASIC0.35□□□□□ -2.35
CFTRP13569 RNU6-1010P-201ENST00000362757 107 ntBASIC0.34□□□□□ -2.36
CFTRP13569 RNU6-898P-201ENST00000365627 104 ntBASIC0.34□□□□□ -2.36
CFTRP13569 MIR520A-201ENST00000384862 85 ntBASIC0.34□□□□□ -2.36
CFTRP13569 AL590084.2-201ENST00000401481 382 ntBASIC0.34□□□□□ -2.36
CFTRP13569 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.34□□□□□ -2.36
CFTRP13569 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.34□□□□□ -2.36
CFTRP13569 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.34□□□□□ -2.36
CFTRP13569 GTF2IP13-201ENST00000438487 386 ntBASIC0.34□□□□□ -2.36
CFTRP13569 BRK1P2-201ENST00000442875 223 ntBASIC0.34□□□□□ -2.36
CFTRP13569 RPL39P6-201ENST00000448289 150 ntBASIC0.34□□□□□ -2.36
CFTRP13569 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.34□□□□□ -2.36
CFTRP13569 AC110760.3-202ENST00000515177 371 ntBASIC0.34□□□□□ -2.36
CFTRP13569 RN7SKP256-201ENST00000517201 314 ntBASIC0.34□□□□□ -2.36
CFTRP13569 AL356057.1-201ENST00000533798 831 ntBASIC0.34□□□□□ -2.36
CFTRP13569 EIF1AXP2-201ENST00000555940 413 ntBASIC0.34□□□□□ -2.36
CFTRP13569 VN1R83P-201ENST00000595685 445 ntBASIC0.34□□□□□ -2.36
CFTRP13569 AC022432.1-201ENST00000595739 310 ntBASIC0.34□□□□□ -2.36
CFTRP13569 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.34□□□□□ -2.36
CFTRP13569 RMST_10.1-201ENST00000616309 154 ntBASIC0.34□□□□□ -2.36
CFTRP13569 AC084824.4-201ENST00000620106 731 ntBASIC0.34□□□□□ -2.36
CFTRP13569 AC120349.3-201ENST00000624377 529 ntBASIC0.34□□□□□ -2.36
CFTRP13569 RNA5SP361-201ENST00000362686 118 ntBASIC0.33□□□□□ -2.36
CFTRP13569 SNORA4.3-201ENST00000365564 137 ntBASIC0.33□□□□□ -2.36
CFTRP13569 RNU6-45P-201ENST00000384471 107 ntBASIC0.33□□□□□ -2.36
CFTRP13569 RNU6-110P-201ENST00000384508 104 ntBASIC0.33□□□□□ -2.36
CFTRP13569 AL022718.1-201ENST00000412004 84 ntBASIC0.33□□□□□ -2.36
CFTRP13569 MTND1P21-201ENST00000412991 285 ntBASIC0.33□□□□□ -2.36
CFTRP13569 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.33□□□□□ -2.36
CFTRP13569 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.33□□□□□ -2.36
CFTRP13569 AL669831.1-202ENST00000428504 417 ntBASIC0.33□□□□□ -2.36
CFTRP13569 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.33□□□□□ -2.36
CFTRP13569 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.33□□□□□ -2.36
CFTRP13569 MTND1P9-201ENST00000453775 944 ntBASIC0.33□□□□□ -2.36
CFTRP13569 AC074344.1-201ENST00000512823 224 ntBASIC0.33□□□□□ -2.36
CFTRP13569 RNU5A-4P-201ENST00000516588 111 ntBASIC0.33□□□□□ -2.36
CFTRP13569 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.33□□□□□ -2.36
CFTRP13569 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.33□□□□□ -2.36
CFTRP13569 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.33□□□□□ -2.36
CFTRP13569 AC068790.6-201ENST00000602558 258 ntBASIC0.33□□□□□ -2.36
CFTRP13569 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
CFTRP13569 AC040896.1-201ENST00000613819 479 ntBASIC0.33□□□□□ -2.36
CFTRP13569 AC132825.7-201ENST00000638744 335 ntBASIC0.33□□□□□ -2.36
CFTRP13569 RNU6-512P-201ENST00000364438 103 ntBASIC0.32□□□□□ -2.36
CFTRP13569 MIR605-201ENST00000385078 83 ntBASIC0.32□□□□□ -2.36
CFTRP13569 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.32□□□□□ -2.36
CFTRP13569 MTCYBP11-201ENST00000447254 1109 ntBASIC0.32□□□□□ -2.36
CFTRP13569 AC020550.1-201ENST00000447385 163 ntBASIC0.32□□□□□ -2.36
CFTRP13569 BTF3P15-201ENST00000455606 336 ntBASIC0.32□□□□□ -2.36
CFTRP13569 AC025423.5-201ENST00000550230 219 ntBASIC0.32□□□□□ -2.36
CFTRP13569 AC093788.1-201ENST00000609356 927 ntBASIC0.32□□□□□ -2.36
CFTRP13569 AC104465.1-201ENST00000611365 139 ntBASIC0.32□□□□□ -2.36
CFTRP13569 MIR1248-201ENST00000629190 106 ntBASIC0.32□□□□□ -2.36
CFTRP13569 RPS3AP37-201ENST00000419176 745 ntBASIC0.31□□□□□ -2.36
CFTRP13569 MTND5P14-201ENST00000441481 1267 ntBASIC0.31□□□□□ -2.36
CFTRP13569 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.31□□□□□ -2.36
CFTRP13569 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.31□□□□□ -2.36
CFTRP13569 AC137800.2-201ENST00000574375 120 ntBASIC0.31□□□□□ -2.36
CFTRP13569 MIR4637-201ENST00000582405 84 ntBASIC0.31□□□□□ -2.36
CFTRP13569 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.31□□□□□ -2.36
CFTRP13569 AC105129.3-201ENST00000605455 485 ntBASIC0.31□□□□□ -2.36
CFTRP13569 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.31□□□□□ -2.36
CFTRP13569 MIR1264-201ENST00000616374 69 ntBASIC0.31□□□□□ -2.36
CFTRP13569 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.31□□□□□ -2.36
CFTRP13569 uc_338.22-201ENST00000622722 187 ntBASIC0.31□□□□□ -2.36
CFTRP13569 Y_RNA.136-201ENST00000363444 102 ntBASIC0.3□□□□□ -2.36
CFTRP13569 RNU4-12P-201ENST00000365233 139 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms