Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 RNU2-2P-201ENST00000410396 191 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 RNU6-293P-201ENST00000411259 106 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 CDK8P2-201ENST00000415020 547 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 AL451074.3-201ENST00000437709 472 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 AL137159.1-201ENST00000452808 512 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 HMGB1P35-201ENST00000503360 598 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 AC079140.5-201ENST00000507882 310 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 AC079140.3-201ENST00000511111 550 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 SNORA25.17-201ENST00000517184 124 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 AC022880.1-201ENST00000534017 973 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 HIF1AP1-201ENST00000553642 175 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 AGGF1P4-201ENST00000568249 801 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 MIR5583-1-201ENST00000580941 59 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 AC004223.2-201ENST00000590309 544 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 AC010620.1-201ENST00000601088 1102 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 SNRPGP17-201ENST00000603780 214 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 AL391646.1-201ENST00000603860 190 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 AC007684.1-201ENST00000609671 477 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 U2.15-201ENST00000611544 191 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 U2.16-201ENST00000613119 191 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 U2.12-201ENST00000613778 191 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 U2.20-201ENST00000613956 192 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 U2.9-201ENST00000615427 191 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 U2.11-201ENST00000616345 191 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 U2.2-201ENST00000616535 191 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 AC009090.3-201ENST00000616553 565 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 U2.3-201ENST00000617785 191 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 U2.19-201ENST00000618602 191 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 RNU2-1-201ENST00000618664 191 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 U2.6-201ENST00000619225 191 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 U2.5-201ENST00000619465 191 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 U2.10-201ENST00000620268 191 ntBASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.6□□□□□ -2.15
IGHV3-43DP0DP04 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 RNU6-428P-201ENST00000362942 107 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 RNU6-336P-201ENST00000364891 107 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 RNU6-996P-201ENST00000365438 107 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 Y_RNA.399-201ENST00000383955 105 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 SNORD116-9-201ENST00000384000 95 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 SNORD116-3-201ENST00000384287 95 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 SNORD116-7-201ENST00000384404 95 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 SNORD116-5-201ENST00000384462 95 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 AL445529.1-201ENST00000398713 389 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 AL590556.1-201ENST00000423231 483 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 USP9YP18-201ENST00000425912 695 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 MTCO2P19-201ENST00000427513 598 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 SRIP2-201ENST00000428470 166 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 AL445646.1-201ENST00000431784 216 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 RPS15AP10-201ENST00000432472 382 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 AC243964.1-201ENST00000441814 261 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 AL031274.1-201ENST00000450334 232 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 SNRPGP7-201ENST00000469016 106 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 RPL38P4-201ENST00000502376 214 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 HMGB1P29-201ENST00000505659 499 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 RNU6-965P-201ENST00000516721 96 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 CYCSP27-201ENST00000527643 293 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 AC022616.8-201ENST00000533569 253 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 AC091544.4-201ENST00000555268 342 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 MTCO3P23-201ENST00000561363 289 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 AC078899.2-201ENST00000595282 212 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 AC107304.1-201ENST00000604229 296 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 U2.17-201ENST00000611454 95 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 AC063943.3-201ENST00000615562 356 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 AC009509.4-201ENST00000619202 509 ntBASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.59□□□□□ -2.15
IGHV3-43DP0DP04 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.59□□□□□ -2.16
IGHV3-43DP0DP04 AC131280.1-202ENST00000624067 4211 ntBASIC1.58□□□□□ -2.16
IGHV3-43DP0DP04 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
IGHV3-43DP0DP04 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
IGHV3-43DP0DP04 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
IGHV3-43DP0DP04 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
IGHV3-43DP0DP04 Y_RNA.1-201ENST00000352915 104 ntBASIC1.58□□□□□ -2.16
IGHV3-43DP0DP04 U8.2-201ENST00000363156 134 ntBASIC1.58□□□□□ -2.16
IGHV3-43DP0DP04 RNU4-52P-201ENST00000384209 138 ntBASIC1.58□□□□□ -2.16
IGHV3-43DP0DP04 RNU6-611P-201ENST00000384276 104 ntBASIC1.58□□□□□ -2.16
IGHV3-43DP0DP04 DEFB108C-201ENST00000400154 252 ntBASIC1.58□□□□□ -2.16
IGHV3-43DP0DP04 Y_RNA.597-201ENST00000410463 100 ntBASIC1.58□□□□□ -2.16
IGHV3-43DP0DP04 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.58□□□□□ -2.16
IGHV3-43DP0DP04 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
IGHV3-43DP0DP04 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.58□□□□□ -2.16
IGHV3-43DP0DP04 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.58□□□□□ -2.16
IGHV3-43DP0DP04 AC073415.1-201ENST00000449240 153 ntBASIC1.58□□□□□ -2.16
IGHV3-43DP0DP04 PSPHP1-201ENST00000450062 261 ntBASIC1.58□□□□□ -2.16
IGHV3-43DP0DP04 RNU7-167P-201ENST00000459160 62 ntBASIC1.58□□□□□ -2.16
IGHV3-43DP0DP04 SNORA59A-201ENST00000459326 152 ntBASIC1.58□□□□□ -2.16
IGHV3-43DP0DP04 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.58□□□□□ -2.16
IGHV3-43DP0DP04 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms