Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RHOP08100 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.24□□□□□ -1.89
RHOP08100 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RHOP08100 AC008669.1-201ENST00000565823 2178 ntBASIC3.24□□□□□ -1.89
RHOP08100 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RHOP08100 ZNF299P-201ENST00000406845 1804 ntBASIC3.23□□□□□ -1.89
RHOP08100 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RHOP08100 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RHOP08100 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.23□□□□□ -1.89
RHOP08100 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
RHOP08100 MIR22-201ENST00000362190 85 ntBASIC3.23□□□□□ -1.89
RHOP08100 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.23□□□□□ -1.89
RHOP08100 MIR518D-201ENST00000385014 87 ntBASIC3.23□□□□□ -1.89
RHOP08100 SNORD67-201ENST00000390833 111 ntBASIC3.23□□□□□ -1.89
RHOP08100 U3.37-201ENST00000408528 213 ntBASIC3.23□□□□□ -1.89
RHOP08100 Y_RNA.605-201ENST00000410577 105 ntBASIC3.23□□□□□ -1.89
RHOP08100 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.23□□□□□ -1.89
RHOP08100 AC022018.1-201ENST00000430685 241 ntBASIC3.23□□□□□ -1.89
RHOP08100 AL353997.1-201ENST00000432936 108 ntBASIC3.23□□□□□ -1.89
RHOP08100 IPO7P1-201ENST00000442031 636 ntBASIC3.23□□□□□ -1.89
RHOP08100 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.23□□□□□ -1.89
RHOP08100 RPS29P27-201ENST00000463711 170 ntBASIC3.23□□□□□ -1.89
RHOP08100 AK3P2-201ENST00000507976 429 ntBASIC3.23□□□□□ -1.89
RHOP08100 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.23□□□□□ -1.89
RHOP08100 RNU6-711P-201ENST00000517255 106 ntBASIC3.23□□□□□ -1.89
RHOP08100 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.23□□□□□ -1.89
RHOP08100 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.23□□□□□ -1.89
RHOP08100 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.23□□□□□ -1.89
RHOP08100 AC091903.1-201ENST00000624322 454 ntBASIC3.23□□□□□ -1.89
RHOP08100 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.23□□□□□ -1.89
RHOP08100 MIR4272-201ENST00000635924 64 ntBASIC3.23□□□□□ -1.89
RHOP08100 MTND5P9-201ENST00000503854 1755 ntBASIC3.23□□□□□ -1.89
RHOP08100 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RHOP08100 PWAR6-201ENST00000552334 4618 ntBASIC3.22□□□□□ -1.89
RHOP08100 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
RHOP08100 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.22□□□□□ -1.89
RHOP08100 Y_RNA.153-201ENST00000363615 91 ntBASIC3.22□□□□□ -1.89
RHOP08100 RNU1-73P-201ENST00000383971 164 ntBASIC3.22□□□□□ -1.89
RHOP08100 Y_RNA.557-201ENST00000384680 107 ntBASIC3.22□□□□□ -1.89
RHOP08100 MIR568-201ENST00000385036 95 ntBASIC3.22□□□□□ -1.89
RHOP08100 EEF1A1P41-201ENST00000414667 207 ntBASIC3.22□□□□□ -1.89
RHOP08100 NUP35P1-201ENST00000422734 947 ntBASIC3.22□□□□□ -1.89
RHOP08100 HMGN2P30-201ENST00000423237 256 ntBASIC3.22□□□□□ -1.89
RHOP08100 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.22□□□□□ -1.89
RHOP08100 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.22□□□□□ -1.89
RHOP08100 AL590664.1-201ENST00000448065 339 ntBASIC3.22□□□□□ -1.89
RHOP08100 RPL37P4-201ENST00000448908 268 ntBASIC3.22□□□□□ -1.89
RHOP08100 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.22□□□□□ -1.89
RHOP08100 FO393415.2-201ENST00000480085 343 ntBASIC3.22□□□□□ -1.89
RHOP08100 RPS4XP22-201ENST00000480755 780 ntBASIC3.22□□□□□ -1.89
RHOP08100 RPL30P14-201ENST00000482744 348 ntBASIC3.22□□□□□ -1.89
RHOP08100 AC105758.1-201ENST00000506038 399 ntBASIC3.22□□□□□ -1.89
RHOP08100 RNU6-377P-201ENST00000515965 102 ntBASIC3.22□□□□□ -1.89
RHOP08100 RNU6-612P-201ENST00000516909 102 ntBASIC3.22□□□□□ -1.89
RHOP08100 RNU7-4P-201ENST00000516961 62 ntBASIC3.22□□□□□ -1.89
RHOP08100 NDUFB9P3-201ENST00000521269 501 ntBASIC3.22□□□□□ -1.89
RHOP08100 AC093331.1-201ENST00000521474 169 ntBASIC3.22□□□□□ -1.89
RHOP08100 AP004607.1-201ENST00000524456 203 ntBASIC3.22□□□□□ -1.89
RHOP08100 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.22□□□□□ -1.89
RHOP08100 AC006023.1-201ENST00000603944 259 ntBASIC3.22□□□□□ -1.89
RHOP08100 PRR13P7-201ENST00000605538 430 ntBASIC3.22□□□□□ -1.89
RHOP08100 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.22□□□□□ -1.89
RHOP08100 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
RHOP08100 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RHOP08100 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
RHOP08100 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
RHOP08100 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RHOP08100 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
RHOP08100 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
RHOP08100 MIR30E-201ENST00000362104 92 ntBASIC3.21□□□□□ -1.9
RHOP08100 Y_RNA.48-201ENST00000362710 103 ntBASIC3.21□□□□□ -1.9
RHOP08100 RNU6-428P-201ENST00000362942 107 ntBASIC3.21□□□□□ -1.9
RHOP08100 Y_RNA.149-201ENST00000363558 117 ntBASIC3.21□□□□□ -1.9
RHOP08100 RNU6-595P-201ENST00000363944 107 ntBASIC3.21□□□□□ -1.9
RHOP08100 RNU6-99P-201ENST00000364721 107 ntBASIC3.21□□□□□ -1.9
RHOP08100 RNU4-42P-201ENST00000364738 142 ntBASIC3.21□□□□□ -1.9
RHOP08100 RNU6-336P-201ENST00000364891 107 ntBASIC3.21□□□□□ -1.9
RHOP08100 Y_RNA.533-201ENST00000384596 114 ntBASIC3.21□□□□□ -1.9
RHOP08100 MIR521-1-201ENST00000384902 87 ntBASIC3.21□□□□□ -1.9
RHOP08100 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.21□□□□□ -1.9
RHOP08100 AC098831.1-201ENST00000440661 216 ntBASIC3.21□□□□□ -1.9
RHOP08100 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.21□□□□□ -1.9
RHOP08100 AC079354.2-201ENST00000453523 154 ntBASIC3.21□□□□□ -1.9
RHOP08100 AC006026.2-201ENST00000457376 180 ntBASIC3.21□□□□□ -1.9
RHOP08100 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.21□□□□□ -1.9
RHOP08100 RPS29P26-201ENST00000477483 171 ntBASIC3.21□□□□□ -1.9
RHOP08100 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.21□□□□□ -1.9
RHOP08100 SNORA31.1-201ENST00000515993 133 ntBASIC3.21□□□□□ -1.9
RHOP08100 SNORA31.5-201ENST00000516190 133 ntBASIC3.21□□□□□ -1.9
RHOP08100 SNORA40.14-201ENST00000516543 86 ntBASIC3.21□□□□□ -1.9
RHOP08100 LINC00933-203ENST00000559812 219 ntBASIC3.21□□□□□ -1.9
RHOP08100 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.21□□□□□ -1.9
RHOP08100 AC009318.2-201ENST00000610917 651 ntBASIC3.21□□□□□ -1.9
RHOP08100 MIR7153-201ENST00000637758 57 ntBASIC3.21□□□□□ -1.9
RHOP08100 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RHOP08100 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.2□□□□□ -1.9
RHOP08100 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RHOP08100 SNORD50.1-201ENST00000362987 71 ntBASIC3.2□□□□□ -1.9
RHOP08100 U3.6-201ENST00000363622 211 ntBASIC3.2□□□□□ -1.9
RHOP08100 Y_RNA.314-201ENST00000365114 102 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms