Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RPS29P11-201ENST00000496507 171 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 RPL23AP63-201ENST00000498752 471 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.56□□□□□ -2.16
HLA-DPB1P04440 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.56□□□□□ -2.16
HLA-DPB1P04440 AP005435.4-201ENST00000529514 284 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 NDUFA5P6-201ENST00000542110 379 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.56□□□□□ -2.16
HLA-DPB1P04440 AC008088.1-201ENST00000580993 280 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 AC008749.1-201ENST00000597650 306 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 Z99497.2-201ENST00000603634 310 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 AC004908.3-201ENST00000610248 625 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 AC104073.3-201ENST00000610942 955 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 AL162373.1-201ENST00000620433 407 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 AC009161.2-201ENST00000624626 138 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 U4.7-201ENST00000638126 106 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 AL354685.2-201ENST00000448218 1447 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 AL356292.1-201ENST00000283110 373 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 U3.13-201ENST00000364804 214 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 RNU6-1127P-201ENST00000384580 107 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 MIR583-201ENST00000384846 75 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 SNORD70.1-201ENST00000391007 85 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 MIR1289-2-201ENST00000408360 111 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 RNU4-46P-201ENST00000410818 138 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 RNU2-32P-201ENST00000411193 191 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DPB1P04440 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.55□□□□□ -2.16
HLA-DPB1P04440 AC096920.1-201ENST00000423991 241 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 AC010095.1-201ENST00000443543 144 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DPB1P04440 RPL39P29-201ENST00000447779 157 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DPB1P04440 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DPB1P04440 snoU13.15-201ENST00000459407 104 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.55□□□□□ -2.16
HLA-DPB1P04440 HMGB1P35-201ENST00000503360 598 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.55□□□□□ -2.16
HLA-DPB1P04440 ARL2BPP4-201ENST00000506854 471 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 AC026407.1-201ENST00000518369 204 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 AP000873.5-201ENST00000533906 236 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 AP000763.2-201ENST00000540641 163 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.55□□□□□ -2.16
HLA-DPB1P04440 MIR5583-1-201ENST00000580941 59 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 AC008752.3-201ENST00000588113 712 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 AC078883.4-201ENST00000623218 367 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
HLA-DPB1P04440 AL390237.1-201ENST00000404226 1415 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 ZNF680P1-201ENST00000436625 1469 ntBASIC1.55□□□□□ -2.16
HLA-DPB1P04440 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.54□□□□□ -2.16
HLA-DPB1P04440 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.54□□□□□ -2.16
HLA-DPB1P04440 RNA5SP276-201ENST00000362580 94 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 RNU6-105P-201ENST00000363909 104 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 MIR544A-201ENST00000384855 91 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 MIR9-3-201ENST00000385084 90 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 MIR1262-201ENST00000408276 93 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 RNA5SP450-201ENST00000411206 102 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 RPS20P15-201ENST00000412792 311 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 CETN4P-201ENST00000432407 469 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.54□□□□□ -2.16
HLA-DPB1P04440 PSPHP1-201ENST00000450062 261 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 snoU13.26-201ENST00000459452 105 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 RPL30P1-201ENST00000488676 339 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 MTCO3P7-201ENST00000510008 774 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.54□□□□□ -2.16
HLA-DPB1P04440 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.54□□□□□ -2.16
HLA-DPB1P04440 RNU2-69P-201ENST00000516061 100 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 RNU6-965P-201ENST00000516721 96 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 MTCO2P4-201ENST00000517968 247 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.54□□□□□ -2.16
HLA-DPB1P04440 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.54□□□□□ -2.16
HLA-DPB1P04440 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.54□□□□□ -2.16
HLA-DPB1P04440 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.54□□□□□ -2.16
HLA-DPB1P04440 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.54□□□□□ -2.16
HLA-DPB1P04440 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.54□□□□□ -2.16
HLA-DPB1P04440 AC104581.2-201ENST00000572227 430 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.54□□□□□ -2.16
HLA-DPB1P04440 AC091135.1-201ENST00000585943 307 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 AC007229.1-201ENST00000590455 412 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.54□□□□□ -2.16
HLA-DPB1P04440 AC119751.7-201ENST00000600494 245 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 AL136363.2-201ENST00000604173 851 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 AC087752.4-201ENST00000605911 462 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
HLA-DPB1P04440 AL132822.1-201ENST00000617063 513 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 AC072046.2-201ENST00000618366 268 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 Z69908.1-201ENST00000622603 247 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 AC022418.1-201ENST00000624118 445 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HLA-DPB1P04440 AC002543.1-201ENST00000299783 1954 ntBASIC1.54□□□□□ -2.16
HLA-DPB1P04440 RNU6-428P-201ENST00000362942 107 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 RNU6-527P-201ENST00000363425 104 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 RNA5SP363-201ENST00000365072 115 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HLA-DPB1P04440 RNU6-393P-201ENST00000384475 107 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 RNU6-606P-201ENST00000384721 111 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 MIR518A2-201ENST00000384966 87 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 U8.13-201ENST00000390842 128 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 AF228730.1-201ENST00000397972 663 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 SNORD56-201ENST00000413522 71 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms