Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 uc_338.15-201ENST00000615470 191 ntBASIC1.52□□□□□ -2.17
CD74P04233 AC097372.5-201ENST00000623665 376 ntBASIC1.52□□□□□ -2.17
CD74P04233 RNU6-212P-201ENST00000362642 104 ntBASIC1.51□□□□□ -2.17
CD74P04233 RNU6-1303P-201ENST00000364841 107 ntBASIC1.51□□□□□ -2.17
CD74P04233 SNORA25B-201ENST00000365507 128 ntBASIC1.51□□□□□ -2.17
CD74P04233 MIR29C-201ENST00000385231 88 ntBASIC1.51□□□□□ -2.17
CD74P04233 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.51□□□□□ -2.17
CD74P04233 AC074117.2-201ENST00000417130 397 ntBASIC1.51□□□□□ -2.17
CD74P04233 PIGFP2-201ENST00000421400 651 ntBASIC1.51□□□□□ -2.17
CD74P04233 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.51□□□□□ -2.17
CD74P04233 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.51□□□□□ -2.17
CD74P04233 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.51□□□□□ -2.17
CD74P04233 C1DP4-201ENST00000455429 424 ntBASIC1.51□□□□□ -2.17
CD74P04233 RPL21P99-201ENST00000480369 423 ntBASIC1.51□□□□□ -2.17
CD74P04233 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.51□□□□□ -2.17
CD74P04233 AC074344.1-201ENST00000512823 224 ntBASIC1.51□□□□□ -2.17
CD74P04233 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.51□□□□□ -2.17
CD74P04233 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.51□□□□□ -2.17
CD74P04233 AC034114.1-201ENST00000520293 285 ntBASIC1.51□□□□□ -2.17
CD74P04233 NDUFA5P6-201ENST00000542110 379 ntBASIC1.51□□□□□ -2.17
CD74P04233 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.51□□□□□ -2.17
CD74P04233 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.51□□□□□ -2.17
CD74P04233 AC119751.7-201ENST00000600494 245 ntBASIC1.51□□□□□ -2.17
CD74P04233 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.51□□□□□ -2.17
CD74P04233 AC072046.2-201ENST00000618366 268 ntBASIC1.51□□□□□ -2.17
CD74P04233 AC099842.1-201ENST00000619919 596 ntBASIC1.51□□□□□ -2.17
CD74P04233 Z69908.1-201ENST00000622603 247 ntBASIC1.51□□□□□ -2.17
CD74P04233 ELL2P3-201ENST00000457883 1602 ntBASIC1.51□□□□□ -2.17
CD74P04233 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CD74P04233 Y_RNA.40-201ENST00000362645 93 ntBASIC1.5□□□□□ -2.17
CD74P04233 RNU6-1010P-201ENST00000362757 107 ntBASIC1.5□□□□□ -2.17
CD74P04233 RNU1-23P-201ENST00000363361 144 ntBASIC1.5□□□□□ -2.17
CD74P04233 RNU4-42P-201ENST00000364738 142 ntBASIC1.5□□□□□ -2.17
CD74P04233 RNU5E-7P-201ENST00000365290 117 ntBASIC1.5□□□□□ -2.17
CD74P04233 RNU4-48P-201ENST00000365559 182 ntBASIC1.5□□□□□ -2.17
CD74P04233 RNU6-622P-201ENST00000384272 103 ntBASIC1.5□□□□□ -2.17
CD74P04233 SNORA67.3-201ENST00000384366 140 ntBASIC1.5□□□□□ -2.17
CD74P04233 RNU6-348P-201ENST00000384386 107 ntBASIC1.5□□□□□ -2.17
CD74P04233 SNORA8-201ENST00000384574 139 ntBASIC1.5□□□□□ -2.17
CD74P04233 MIR518A2-201ENST00000384966 87 ntBASIC1.5□□□□□ -2.17
CD74P04233 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.5□□□□□ -2.17
CD74P04233 MIR1289-2-201ENST00000408360 111 ntBASIC1.5□□□□□ -2.17
CD74P04233 RNU2-3P-201ENST00000410144 191 ntBASIC1.5□□□□□ -2.17
CD74P04233 RN7SKP32-201ENST00000410167 303 ntBASIC1.5□□□□□ -2.17
CD74P04233 POLHP1-201ENST00000411806 470 ntBASIC1.5□□□□□ -2.17
CD74P04233 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.5□□□□□ -2.17
CD74P04233 AL596276.1-201ENST00000434465 418 ntBASIC1.5□□□□□ -2.17
CD74P04233 MTND4P32-201ENST00000437189 1237 ntBASIC1.5□□□□□ -2.17
CD74P04233 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.5□□□□□ -2.17
CD74P04233 MTND1P18-201ENST00000448191 573 ntBASIC1.5□□□□□ -2.17
CD74P04233 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.5□□□□□ -2.17
CD74P04233 AC006026.2-201ENST00000457376 180 ntBASIC1.5□□□□□ -2.17
CD74P04233 RNU6-956P-201ENST00000458868 103 ntBASIC1.5□□□□□ -2.17
CD74P04233 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.5□□□□□ -2.17
CD74P04233 MTCO3P9-201ENST00000506989 781 ntBASIC1.5□□□□□ -2.17
CD74P04233 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.5□□□□□ -2.17
CD74P04233 SNORD27.1-201ENST00000516319 72 ntBASIC1.5□□□□□ -2.17
CD74P04233 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.5□□□□□ -2.17
CD74P04233 AP002963.1-201ENST00000530590 184 ntBASIC1.5□□□□□ -2.17
CD74P04233 MIR4528-201ENST00000577763 90 ntBASIC1.5□□□□□ -2.17
CD74P04233 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.5□□□□□ -2.17
CD74P04233 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.5□□□□□ -2.17
CD74P04233 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.5□□□□□ -2.17
CD74P04233 BNIP3P25-201ENST00000596023 559 ntBASIC1.5□□□□□ -2.17
CD74P04233 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.5□□□□□ -2.17
CD74P04233 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.5□□□□□ -2.17
CD74P04233 AC008945.2-201ENST00000606056 604 ntBASIC1.5□□□□□ -2.17
CD74P04233 AC008536.2-201ENST00000607284 349 ntBASIC1.5□□□□□ -2.17
CD74P04233 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.5□□□□□ -2.17
CD74P04233 AC097520.1-201ENST00000624435 385 ntBASIC1.5□□□□□ -2.17
CD74P04233 MIR3974-201ENST00000637126 96 ntBASIC1.5□□□□□ -2.17
CD74P04233 AC241585.2-209ENST00000638217 143 ntBASIC1.5□□□□□ -2.17
CD74P04233 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CD74P04233 RNU6-37P-201ENST00000362692 107 ntBASIC1.49□□□□□ -2.17
CD74P04233 RNU6-78P-201ENST00000362897 107 ntBASIC1.49□□□□□ -2.17
CD74P04233 RNU6-527P-201ENST00000363425 104 ntBASIC1.49□□□□□ -2.17
CD74P04233 RNU6-11P-201ENST00000364234 107 ntBASIC1.49□□□□□ -2.17
CD74P04233 RNU6-25P-201ENST00000383873 107 ntBASIC1.49□□□□□ -2.17
CD74P04233 RNU6-1-201ENST00000383898 107 ntBASIC1.49□□□□□ -2.17
CD74P04233 RNU6-48P-201ENST00000384161 107 ntBASIC1.49□□□□□ -2.17
CD74P04233 RNU6-36P-201ENST00000384172 107 ntBASIC1.49□□□□□ -2.17
CD74P04233 RNU6-4P-201ENST00000384205 107 ntBASIC1.49□□□□□ -2.17
CD74P04233 RNU6-5P-201ENST00000384238 107 ntBASIC1.49□□□□□ -2.17
CD74P04233 RNU6-3P-201ENST00000384314 107 ntBASIC1.49□□□□□ -2.17
CD74P04233 RNU6-16P-201ENST00000384385 107 ntBASIC1.49□□□□□ -2.17
CD74P04233 RNU6-15P-201ENST00000384534 107 ntBASIC1.49□□□□□ -2.17
CD74P04233 RNU6-2-201ENST00000384627 107 ntBASIC1.49□□□□□ -2.17
CD74P04233 RNU6-29P-201ENST00000384637 107 ntBASIC1.49□□□□□ -2.17
CD74P04233 RNU6-9-201ENST00000384776 107 ntBASIC1.49□□□□□ -2.17
CD74P04233 RNU6-33P-201ENST00000384793 107 ntBASIC1.49□□□□□ -2.17
CD74P04233 RAP1BP3-201ENST00000407180 549 ntBASIC1.49□□□□□ -2.17
CD74P04233 RNU6-607P-201ENST00000411283 108 ntBASIC1.49□□□□□ -2.17
CD74P04233 CYCSP33-201ENST00000414485 327 ntBASIC1.49□□□□□ -2.17
CD74P04233 AC090960.1-201ENST00000421072 306 ntBASIC1.49□□□□□ -2.17
CD74P04233 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.49□□□□□ -2.17
CD74P04233 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.49□□□□□ -2.17
CD74P04233 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CD74P04233 AC245102.2-201ENST00000448956 180 ntBASIC1.49□□□□□ -2.17
CD74P04233 AL137159.1-201ENST00000452808 512 ntBASIC1.49□□□□□ -2.17
CD74P04233 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms