Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.55□□□□□ -2.32
IFNA1P01562 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.55□□□□□ -2.32
IFNA1P01562 SNRPFP4-201ENST00000456366 242 ntBASIC0.55□□□□□ -2.32
IFNA1P01562 AL122001.1-201ENST00000457027 370 ntBASIC0.55□□□□□ -2.32
IFNA1P01562 SNORD124-201ENST00000459577 104 ntBASIC0.55□□□□□ -2.32
IFNA1P01562 AC108210.2-201ENST00000503681 201 ntBASIC0.55□□□□□ -2.32
IFNA1P01562 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.55□□□□□ -2.32
IFNA1P01562 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.55□□□□□ -2.32
IFNA1P01562 SNORA43.2-201ENST00000516652 128 ntBASIC0.55□□□□□ -2.32
IFNA1P01562 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.55□□□□□ -2.32
IFNA1P01562 AC090142.3-201ENST00000519012 385 ntBASIC0.55□□□□□ -2.32
IFNA1P01562 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.55□□□□□ -2.32
IFNA1P01562 OR8K2P-201ENST00000524645 927 ntBASIC0.55□□□□□ -2.32
IFNA1P01562 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.55□□□□□ -2.32
IFNA1P01562 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.55□□□□□ -2.32
IFNA1P01562 AL353778.1-201ENST00000603149 408 ntBASIC0.55□□□□□ -2.32
IFNA1P01562 AC006270.3-201ENST00000605967 1036 ntBASIC0.55□□□□□ -2.32
IFNA1P01562 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.55□□□□□ -2.32
IFNA1P01562 AC083806.3-201ENST00000614016 455 ntBASIC0.55□□□□□ -2.32
IFNA1P01562 RNU6-862P-201ENST00000362804 105 ntBASIC0.54□□□□□ -2.32
IFNA1P01562 RNU5B-4P-201ENST00000363508 111 ntBASIC0.54□□□□□ -2.32
IFNA1P01562 RNA5SP259-201ENST00000365541 109 ntBASIC0.54□□□□□ -2.32
IFNA1P01562 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.54□□□□□ -2.32
IFNA1P01562 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.54□□□□□ -2.32
IFNA1P01562 RPL17P35-201ENST00000432217 549 ntBASIC0.54□□□□□ -2.32
IFNA1P01562 RSL24D1P8-201ENST00000434442 492 ntBASIC0.54□□□□□ -2.32
IFNA1P01562 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.54□□□□□ -2.32
IFNA1P01562 GTF2IP13-201ENST00000438487 386 ntBASIC0.54□□□□□ -2.32
IFNA1P01562 AC069257.2-201ENST00000441819 155 ntBASIC0.54□□□□□ -2.32
IFNA1P01562 NDUFB1P2-201ENST00000449477 176 ntBASIC0.54□□□□□ -2.32
IFNA1P01562 ATP5J2P3-201ENST00000451550 258 ntBASIC0.54□□□□□ -2.32
IFNA1P01562 snoU13.23-201ENST00000458863 104 ntBASIC0.54□□□□□ -2.32
IFNA1P01562 RAP1BP2-201ENST00000478270 544 ntBASIC0.54□□□□□ -2.32
IFNA1P01562 RNU6-165P-201ENST00000517170 99 ntBASIC0.54□□□□□ -2.32
IFNA1P01562 AP000907.2-201ENST00000530827 353 ntBASIC0.54□□□□□ -2.32
IFNA1P01562 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.54□□□□□ -2.32
IFNA1P01562 MIR4698-201ENST00000577795 80 ntBASIC0.54□□□□□ -2.32
IFNA1P01562 AL138889.2-201ENST00000603883 242 ntBASIC0.54□□□□□ -2.32
IFNA1P01562 AL022154.1-201ENST00000604698 785 ntBASIC0.54□□□□□ -2.32
IFNA1P01562 AC105129.3-201ENST00000605455 485 ntBASIC0.54□□□□□ -2.32
IFNA1P01562 AC024940.5-201ENST00000622889 474 ntBASIC0.54□□□□□ -2.32
IFNA1P01562 AC006927.2-201ENST00000639256 389 ntBASIC0.54□□□□□ -2.32
IFNA1P01562 MTND4P16-201ENST00000466108 1367 ntBASIC0.54□□□□□ -2.32
IFNA1P01562 AC068700.1-201ENST00000565862 3754 ntBASIC0.54□□□□□ -2.32
IFNA1P01562 SNORA12-201ENST00000391162 147 ntBASIC0.53□□□□□ -2.32
IFNA1P01562 COX6CP10-201ENST00000416832 224 ntBASIC0.53□□□□□ -2.32
IFNA1P01562 ARL5AP1-201ENST00000418991 388 ntBASIC0.53□□□□□ -2.32
IFNA1P01562 AC063976.4-201ENST00000421971 163 ntBASIC0.53□□□□□ -2.32
IFNA1P01562 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.53□□□□□ -2.32
IFNA1P01562 MTCO2P1-201ENST00000424648 477 ntBASIC0.53□□□□□ -2.32
IFNA1P01562 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.53□□□□□ -2.32
IFNA1P01562 AL008629.1-201ENST00000438615 184 ntBASIC0.53□□□□□ -2.32
IFNA1P01562 COX6CP14-201ENST00000469580 174 ntBASIC0.53□□□□□ -2.32
IFNA1P01562 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.53□□□□□ -2.32
IFNA1P01562 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.53□□□□□ -2.32
IFNA1P01562 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.53□□□□□ -2.32
IFNA1P01562 Y_RNA.687-201ENST00000516558 91 ntBASIC0.53□□□□□ -2.32
IFNA1P01562 RNA5SP168-201ENST00000516642 112 ntBASIC0.53□□□□□ -2.32
IFNA1P01562 SNORA31.16-201ENST00000516773 139 ntBASIC0.53□□□□□ -2.32
IFNA1P01562 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.53□□□□□ -2.32
IFNA1P01562 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.53□□□□□ -2.32
IFNA1P01562 AC084824.5-201ENST00000612009 413 ntBASIC0.53□□□□□ -2.32
IFNA1P01562 AL138955.1-201ENST00000622881 1040 ntBASIC0.53□□□□□ -2.32
IFNA1P01562 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.53□□□□□ -2.33
IFNA1P01562 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
IFNA1P01562 MIR23A-201ENST00000385245 73 ntBASIC0.52□□□□□ -2.33
IFNA1P01562 RPS3AP36-201ENST00000398190 775 ntBASIC0.52□□□□□ -2.33
IFNA1P01562 AL117342.1-201ENST00000404861 406 ntBASIC0.52□□□□□ -2.33
IFNA1P01562 AC092809.3-201ENST00000415453 231 ntBASIC0.52□□□□□ -2.33
IFNA1P01562 RPS26P5-201ENST00000418544 335 ntBASIC0.52□□□□□ -2.33
IFNA1P01562 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.52□□□□□ -2.33
IFNA1P01562 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.52□□□□□ -2.33
IFNA1P01562 RN7SL429P-201ENST00000479090 223 ntBASIC0.52□□□□□ -2.33
IFNA1P01562 RN7SL489P-201ENST00000486185 223 ntBASIC0.52□□□□□ -2.33
IFNA1P01562 RN7SL327P-201ENST00000488659 223 ntBASIC0.52□□□□□ -2.33
IFNA1P01562 AC117454.1-201ENST00000491120 168 ntBASIC0.52□□□□□ -2.33
IFNA1P01562 RN7SKP219-201ENST00000516825 296 ntBASIC0.52□□□□□ -2.33
IFNA1P01562 BNIP3P6-201ENST00000549284 499 ntBASIC0.52□□□□□ -2.33
IFNA1P01562 AC015712.3-201ENST00000559380 164 ntBASIC0.52□□□□□ -2.33
IFNA1P01562 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.52□□□□□ -2.33
IFNA1P01562 AC174048.1-201ENST00000603389 144 ntBASIC0.52□□□□□ -2.33
IFNA1P01562 AC018889.1-201ENST00000605372 397 ntBASIC0.52□□□□□ -2.33
IFNA1P01562 AC080078.3-201ENST00000605407 463 ntBASIC0.52□□□□□ -2.33
IFNA1P01562 AC092574.1-201ENST00000609771 420 ntBASIC0.52□□□□□ -2.33
IFNA1P01562 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.52□□□□□ -2.33
IFNA1P01562 RN7SL853P-201ENST00000617250 223 ntBASIC0.52□□□□□ -2.33
IFNA1P01562 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
IFNA1P01562 AL159152.1-201ENST00000635019 2587 ntBASIC0.52□□□□□ -2.33
IFNA1P01562 AC092104.1-201ENST00000497346 1441 ntBASIC0.52□□□□□ -2.33
IFNA1P01562 RNU1-96P-201ENST00000364163 162 ntBASIC0.51□□□□□ -2.33
IFNA1P01562 RNU6-438P-201ENST00000365561 103 ntBASIC0.51□□□□□ -2.33
IFNA1P01562 RNU6-190P-201ENST00000384154 102 ntBASIC0.51□□□□□ -2.33
IFNA1P01562 RN7SKP266-201ENST00000410232 287 ntBASIC0.51□□□□□ -2.33
IFNA1P01562 RPS3AP1-201ENST00000413190 320 ntBASIC0.51□□□□□ -2.33
IFNA1P01562 UBE2D3P3-201ENST00000426992 425 ntBASIC0.51□□□□□ -2.33
IFNA1P01562 AC119751.4-201ENST00000507498 357 ntBASIC0.51□□□□□ -2.33
IFNA1P01562 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.51□□□□□ -2.33
IFNA1P01562 SNORA31.4-201ENST00000516049 129 ntBASIC0.51□□□□□ -2.33
IFNA1P01562 AL442163.3-201ENST00000554110 156 ntBASIC0.51□□□□□ -2.33
IFNA1P01562 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms