Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.79□□□□□ -1.96
DDX58O95786 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.79□□□□□ -1.96
DDX58O95786 MTND3P16-201ENST00000452205 344 ntBASIC2.79□□□□□ -1.96
DDX58O95786 DYNLL1P5-201ENST00000467158 270 ntBASIC2.79□□□□□ -1.96
DDX58O95786 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.79□□□□□ -1.96
DDX58O95786 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.79□□□□□ -1.96
DDX58O95786 SNORA31.23-201ENST00000517219 133 ntBASIC2.79□□□□□ -1.96
DDX58O95786 AC109329.1-201ENST00000518744 317 ntBASIC2.79□□□□□ -1.96
DDX58O95786 MIR4424-201ENST00000585257 86 ntBASIC2.79□□□□□ -1.96
DDX58O95786 RPL30P11-203ENST00000598995 310 ntBASIC2.79□□□□□ -1.96
DDX58O95786 AL670379.2-201ENST00000604983 252 ntBASIC2.79□□□□□ -1.96
DDX58O95786 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
DDX58O95786 Z69720.2-201ENST00000624755 279 ntBASIC2.79□□□□□ -1.96
DDX58O95786 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.79□□□□□ -1.96
DDX58O95786 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
DDX58O95786 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
DDX58O95786 Y_RNA.9-201ENST00000362354 101 ntBASIC2.78□□□□□ -1.96
DDX58O95786 Y_RNA.402-201ENST00000383972 102 ntBASIC2.78□□□□□ -1.96
DDX58O95786 RNU6-38P-201ENST00000384085 107 ntBASIC2.78□□□□□ -1.96
DDX58O95786 RNU6-648P-201ENST00000410190 107 ntBASIC2.78□□□□□ -1.96
DDX58O95786 RNA5SP181-201ENST00000410246 98 ntBASIC2.78□□□□□ -1.96
DDX58O95786 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX58O95786 AC124916.1-201ENST00000444020 547 ntBASIC2.78□□□□□ -1.96
DDX58O95786 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX58O95786 RNU6-333P-201ENST00000459117 107 ntBASIC2.78□□□□□ -1.96
DDX58O95786 RPL30P12-201ENST00000474666 353 ntBASIC2.78□□□□□ -1.96
DDX58O95786 AF213884.2-201ENST00000510417 903 ntBASIC2.78□□□□□ -1.96
DDX58O95786 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX58O95786 RNU2-53P-201ENST00000516257 147 ntBASIC2.78□□□□□ -1.96
DDX58O95786 SCARNA16.3-201ENST00000516595 184 ntBASIC2.78□□□□□ -1.96
DDX58O95786 SNORA25.17-201ENST00000517184 124 ntBASIC2.78□□□□□ -1.96
DDX58O95786 IGKV3-31-201ENST00000523109 329 ntBASIC2.78□□□□□ -1.96
DDX58O95786 MTND1P35-201ENST00000526739 508 ntBASIC2.78□□□□□ -1.96
DDX58O95786 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX58O95786 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.78□□□□□ -1.96
DDX58O95786 AC092747.3-201ENST00000603769 301 ntBASIC2.78□□□□□ -1.96
DDX58O95786 DISC2.1-201ENST00000612827 205 ntBASIC2.78□□□□□ -1.96
DDX58O95786 AC008121.3-201ENST00000618726 433 ntBASIC2.78□□□□□ -1.96
DDX58O95786 MIR1321-201ENST00000637766 79 ntBASIC2.78□□□□□ -1.96
DDX58O95786 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
DDX58O95786 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
DDX58O95786 SNORA48.3-201ENST00000391081 134 ntBASIC2.77□□□□□ -1.97
DDX58O95786 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.77□□□□□ -1.97
DDX58O95786 AF274854.1-201ENST00000413236 615 ntBASIC2.77□□□□□ -1.97
DDX58O95786 AC003685.2-201ENST00000422795 395 ntBASIC2.77□□□□□ -1.97
DDX58O95786 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.77□□□□□ -1.97
DDX58O95786 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.77□□□□□ -1.97
DDX58O95786 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.77□□□□□ -1.97
DDX58O95786 AL161788.1-201ENST00000441805 169 ntBASIC2.77□□□□□ -1.97
DDX58O95786 AL031274.1-201ENST00000450334 232 ntBASIC2.77□□□□□ -1.97
DDX58O95786 snoU13.15-201ENST00000459407 104 ntBASIC2.77□□□□□ -1.97
DDX58O95786 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.77□□□□□ -1.97
DDX58O95786 RNU6-189P-201ENST00000516120 101 ntBASIC2.77□□□□□ -1.97
DDX58O95786 SNORD60.2-201ENST00000516883 86 ntBASIC2.77□□□□□ -1.97
DDX58O95786 AC109479.2-201ENST00000517842 174 ntBASIC2.77□□□□□ -1.97
DDX58O95786 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
DDX58O95786 CENPUP1-201ENST00000526649 1202 ntBASIC2.77□□□□□ -1.97
DDX58O95786 AL157687.1-201ENST00000554853 619 ntBASIC2.77□□□□□ -1.97
DDX58O95786 MTCO3P23-201ENST00000561363 289 ntBASIC2.77□□□□□ -1.97
DDX58O95786 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.77□□□□□ -1.97
DDX58O95786 TPRKBP2-201ENST00000565969 475 ntBASIC2.77□□□□□ -1.97
DDX58O95786 AC090897.2-201ENST00000581715 130 ntBASIC2.77□□□□□ -1.97
DDX58O95786 VN1R80P-201ENST00000597126 338 ntBASIC2.77□□□□□ -1.97
DDX58O95786 AC123912.5-201ENST00000605470 343 ntBASIC2.77□□□□□ -1.97
DDX58O95786 RNU6-85P-201ENST00000605989 107 ntBASIC2.77□□□□□ -1.97
DDX58O95786 AC097372.5-201ENST00000623665 376 ntBASIC2.77□□□□□ -1.97
DDX58O95786 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
DDX58O95786 AP006437.1-201ENST00000641440 3685 ntBASIC2.77□□□□□ -1.97
DDX58O95786 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
DDX58O95786 OR4G1P-203ENST00000641984 1631 ntBASIC2.76□□□□□ -1.97
DDX58O95786 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
DDX58O95786 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
DDX58O95786 Y_RNA.6-201ENST00000362350 114 ntBASIC2.76□□□□□ -1.97
DDX58O95786 Y_RNA.38-201ENST00000362617 102 ntBASIC2.76□□□□□ -1.97
DDX58O95786 Y_RNA.378-201ENST00000365652 113 ntBASIC2.76□□□□□ -1.97
DDX58O95786 MIR186-201ENST00000384988 86 ntBASIC2.76□□□□□ -1.97
DDX58O95786 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
DDX58O95786 RN7SKP158-201ENST00000410453 326 ntBASIC2.76□□□□□ -1.97
DDX58O95786 POLHP1-201ENST00000411806 470 ntBASIC2.76□□□□□ -1.97
DDX58O95786 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.76□□□□□ -1.97
DDX58O95786 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.76□□□□□ -1.97
DDX58O95786 AC091885.1-201ENST00000506658 268 ntBASIC2.76□□□□□ -1.97
DDX58O95786 MTCYBP40-201ENST00000509390 1135 ntBASIC2.76□□□□□ -1.97
DDX58O95786 AP005902.1-201ENST00000521358 186 ntBASIC2.76□□□□□ -1.97
DDX58O95786 AC109635.3-201ENST00000529536 185 ntBASIC2.76□□□□□ -1.97
DDX58O95786 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.76□□□□□ -1.97
DDX58O95786 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.76□□□□□ -1.97
DDX58O95786 AC023050.3-201ENST00000541142 333 ntBASIC2.76□□□□□ -1.97
DDX58O95786 OR11H5P-201ENST00000554039 926 ntBASIC2.76□□□□□ -1.97
DDX58O95786 AL138976.2-201ENST00000563989 694 ntBASIC2.76□□□□□ -1.97
DDX58O95786 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.76□□□□□ -1.97
DDX58O95786 MIR4446-201ENST00000578505 67 ntBASIC2.76□□□□□ -1.97
DDX58O95786 APOOP1-201ENST00000604695 592 ntBASIC2.76□□□□□ -1.97
DDX58O95786 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.76□□□□□ -1.97
DDX58O95786 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.76□□□□□ -1.97
DDX58O95786 AL359757.2-201ENST00000624309 274 ntBASIC2.76□□□□□ -1.97
DDX58O95786 AL160394.1-201ENST00000624765 724 ntBASIC2.76□□□□□ -1.97
DDX58O95786 AC090517.3-201ENST00000625170 141 ntBASIC2.76□□□□□ -1.97
DDX58O95786 MIR219B-201ENST00000637023 88 ntBASIC2.76□□□□□ -1.97
DDX58O95786 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms