Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 IFNA11P-201ENST00000446352 526 ntBASIC2.24□□□□□ -2.05
CSDE1O75534 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.24□□□□□ -2.05
CSDE1O75534 PSPHP1-201ENST00000450062 261 ntBASIC2.24□□□□□ -2.05
CSDE1O75534 AF213884.2-201ENST00000510417 903 ntBASIC2.24□□□□□ -2.05
CSDE1O75534 RNU2-69P-201ENST00000516061 100 ntBASIC2.24□□□□□ -2.05
CSDE1O75534 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.24□□□□□ -2.05
CSDE1O75534 SNORA40.12-201ENST00000516329 111 ntBASIC2.24□□□□□ -2.05
CSDE1O75534 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.24□□□□□ -2.05
CSDE1O75534 AC015712.3-201ENST00000559380 164 ntBASIC2.24□□□□□ -2.05
CSDE1O75534 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.24□□□□□ -2.05
CSDE1O75534 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.24□□□□□ -2.05
CSDE1O75534 MIR4769-201ENST00000584126 77 ntBASIC2.24□□□□□ -2.05
CSDE1O75534 SNORD14A-201ENST00000606526 91 ntBASIC2.24□□□□□ -2.05
CSDE1O75534 AP001330.5-201ENST00000607176 411 ntBASIC2.24□□□□□ -2.05
CSDE1O75534 AC064807.4-201ENST00000607201 407 ntBASIC2.24□□□□□ -2.05
CSDE1O75534 RNU6-91P-201ENST00000607774 107 ntBASIC2.24□□□□□ -2.05
CSDE1O75534 AC096772.1-201ENST00000609146 564 ntBASIC2.24□□□□□ -2.05
CSDE1O75534 Z82243.1-201ENST00000609432 473 ntBASIC2.24□□□□□ -2.05
CSDE1O75534 U2.17-201ENST00000611454 95 ntBASIC2.24□□□□□ -2.05
CSDE1O75534 uc_338.34-201ENST00000617467 174 ntBASIC2.24□□□□□ -2.05
CSDE1O75534 AC068792.1-201ENST00000621354 417 ntBASIC2.24□□□□□ -2.05
CSDE1O75534 AL359880.1-201ENST00000621879 266 ntBASIC2.24□□□□□ -2.05
CSDE1O75534 AC138627.2-201ENST00000624202 601 ntBASIC2.24□□□□□ -2.05
CSDE1O75534 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
CSDE1O75534 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
CSDE1O75534 RNU6-942P-201ENST00000363002 107 ntBASIC2.23□□□□□ -2.05
CSDE1O75534 RNA5SP240-201ENST00000365355 128 ntBASIC2.23□□□□□ -2.05
CSDE1O75534 Y_RNA.481-201ENST00000384373 102 ntBASIC2.23□□□□□ -2.05
CSDE1O75534 CALM2P3-201ENST00000400429 449 ntBASIC2.23□□□□□ -2.05
CSDE1O75534 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.23□□□□□ -2.05
CSDE1O75534 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.23□□□□□ -2.05
CSDE1O75534 AC124916.1-201ENST00000444020 547 ntBASIC2.23□□□□□ -2.05
CSDE1O75534 CYP2C59P-201ENST00000457790 269 ntBASIC2.23□□□□□ -2.05
CSDE1O75534 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.23□□□□□ -2.05
CSDE1O75534 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.23□□□□□ -2.05
CSDE1O75534 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.23□□□□□ -2.05
CSDE1O75534 RNA5SP401-201ENST00000515920 127 ntBASIC2.23□□□□□ -2.05
CSDE1O75534 SNORA43.2-201ENST00000516652 128 ntBASIC2.23□□□□□ -2.05
CSDE1O75534 MTND4P7-201ENST00000523876 130 ntBASIC2.23□□□□□ -2.05
CSDE1O75534 AC104383.1-201ENST00000530297 370 ntBASIC2.23□□□□□ -2.05
CSDE1O75534 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.23□□□□□ -2.05
CSDE1O75534 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.23□□□□□ -2.05
CSDE1O75534 AC009127.3-201ENST00000570531 403 ntBASIC2.23□□□□□ -2.05
CSDE1O75534 RPS15AP11-201ENST00000594193 385 ntBASIC2.23□□□□□ -2.05
CSDE1O75534 AL138963.2-201ENST00000605137 226 ntBASIC2.23□□□□□ -2.05
CSDE1O75534 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.23□□□□□ -2.05
CSDE1O75534 AC093788.1-201ENST00000609356 927 ntBASIC2.23□□□□□ -2.05
CSDE1O75534 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.23□□□□□ -2.05
CSDE1O75534 U4atac.1-201ENST00000618345 95 ntBASIC2.23□□□□□ -2.05
CSDE1O75534 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CSDE1O75534 AP003400.5-201ENST00000624827 617 ntBASIC2.23□□□□□ -2.05
CSDE1O75534 AC099654.12-201ENST00000639868 649 ntBASIC2.23□□□□□ -2.05
CSDE1O75534 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
CSDE1O75534 MTND4P1-201ENST00000457501 1466 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNU6-37P-201ENST00000362692 107 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNA5SP99-201ENST00000364020 114 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNU6-11P-201ENST00000364234 107 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNU6-25P-201ENST00000383873 107 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNU6-1-201ENST00000383898 107 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 SNORA6-201ENST00000384033 151 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNU6-48P-201ENST00000384161 107 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNU6-36P-201ENST00000384172 107 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNU6-4P-201ENST00000384205 107 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNU6-5P-201ENST00000384238 107 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNU6-3P-201ENST00000384314 107 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 Y_RNA.480-201ENST00000384364 102 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNU6-16P-201ENST00000384385 107 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNU6-15P-201ENST00000384534 107 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNU6-2-201ENST00000384627 107 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNU6-29P-201ENST00000384637 107 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNU6-9-201ENST00000384776 107 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNU6-33P-201ENST00000384793 107 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNU6-1140P-201ENST00000410517 106 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.22□□□□□ -2.05
CSDE1O75534 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.22□□□□□ -2.05
CSDE1O75534 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.22□□□□□ -2.05
CSDE1O75534 AL121601.2-201ENST00000438019 707 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNU7-180P-201ENST00000459240 63 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNU6-261P-201ENST00000459506 102 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 AC083798.1-201ENST00000472671 131 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.22□□□□□ -2.05
CSDE1O75534 AC008526.1-201ENST00000509149 338 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.22□□□□□ -2.05
CSDE1O75534 AC009646.1-201ENST00000510455 318 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNU6-314P-201ENST00000516574 104 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNU5B-3P-201ENST00000516601 115 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 AC079598.5-201ENST00000547460 117 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 AL512360.1-201ENST00000555346 234 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.22□□□□□ -2.05
CSDE1O75534 AL138976.2-201ENST00000563989 694 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.22□□□□□ -2.05
CSDE1O75534 AC021646.1-201ENST00000605469 484 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 RNU6-6P-201ENST00000606623 107 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 AC002044.1-201ENST00000606707 158 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 MIR6840-201ENST00000611937 71 ntBASIC2.22□□□□□ -2.05
CSDE1O75534 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.22□□□□□ -2.05
CSDE1O75534 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.21□□□□□ -2.06
CSDE1O75534 Y_RNA.41-201ENST00000362646 102 ntBASIC2.21□□□□□ -2.06
CSDE1O75534 RNU6-78P-201ENST00000362897 107 ntBASIC2.21□□□□□ -2.06
CSDE1O75534 SNORD56.1-201ENST00000362913 68 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms