Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 RNU6-713P-201ENST00000384761 107 ntBASIC4.03□□□□□ -1.76
VAMP4O75379 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.03□□□□□ -1.76
VAMP4O75379 MTND3P9-201ENST00000429526 346 ntBASIC4.03□□□□□ -1.76
VAMP4O75379 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.03□□□□□ -1.76
VAMP4O75379 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.03□□□□□ -1.76
VAMP4O75379 OR2AQ1P-201ENST00000451972 200 ntBASIC4.03□□□□□ -1.76
VAMP4O75379 AC006445.1-201ENST00000491925 405 ntBASIC4.03□□□□□ -1.76
VAMP4O75379 RNU2-53P-201ENST00000516257 147 ntBASIC4.03□□□□□ -1.76
VAMP4O75379 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.03□□□□□ -1.76
VAMP4O75379 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.03□□□□□ -1.76
VAMP4O75379 AL590705.4-201ENST00000532209 134 ntBASIC4.03□□□□□ -1.76
VAMP4O75379 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.03□□□□□ -1.76
VAMP4O75379 RPS29P30-201ENST00000600975 111 ntBASIC4.03□□□□□ -1.76
VAMP4O75379 AC243829.7-201ENST00000633081 225 ntBASIC4.03□□□□□ -1.76
VAMP4O75379 U2.21-201ENST00000637295 81 ntBASIC4.03□□□□□ -1.76
VAMP4O75379 U6.99-201ENST00000637524 83 ntBASIC4.03□□□□□ -1.76
VAMP4O75379 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
VAMP4O75379 AC022336.2-201ENST00000568966 2538 ntBASIC4.03□□□□□ -1.76
VAMP4O75379 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.03□□□□□ -1.76
VAMP4O75379 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
VAMP4O75379 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
VAMP4O75379 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.02□□□□□ -1.77
VAMP4O75379 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VAMP4O75379 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
VAMP4O75379 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
VAMP4O75379 FTLP6-201ENST00000355274 422 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 SNORD56.3-201ENST00000363507 71 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 Y_RNA.307-201ENST00000365022 117 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 Y_RNA.396-201ENST00000383949 103 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 SNORA54-201ENST00000384281 123 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 Y_RNA.489-201ENST00000384410 101 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 MIR325-201ENST00000385260 98 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 U3.37-201ENST00000408528 213 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 Y_RNA.592-201ENST00000410274 109 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 RNA5SP494-201ENST00000410653 129 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 ELOCP20-201ENST00000422460 345 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 USP9YP16-201ENST00000430287 407 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 NDUFB4P6-201ENST00000436819 366 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 PCNPP5-201ENST00000452246 481 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 AC006539.3-201ENST00000454258 129 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 USP9YP23-201ENST00000455085 407 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 snoU109.2-201ENST00000459316 135 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 AC104564.1-201ENST00000493028 407 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.02□□□□□ -1.77
VAMP4O75379 SNORA64.4-201ENST00000516632 81 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 AC109329.1-201ENST00000518744 317 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 AC010186.2-204ENST00000537668 439 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.02□□□□□ -1.77
VAMP4O75379 LINC00933-203ENST00000559812 219 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 CYCSP39-201ENST00000565821 309 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.02□□□□□ -1.77
VAMP4O75379 AL161756.2-201ENST00000604597 246 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 MIR622-201ENST00000638396 96 ntBASIC4.02□□□□□ -1.77
VAMP4O75379 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VAMP4O75379 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VAMP4O75379 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.02□□□□□ -1.77
VAMP4O75379 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VAMP4O75379 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
VAMP4O75379 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VAMP4O75379 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
VAMP4O75379 OR56A5-201ENST00000340110 738 ntBASIC4.01□□□□□ -1.77
VAMP4O75379 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
VAMP4O75379 RNU6-78P-201ENST00000362897 107 ntBASIC4.01□□□□□ -1.77
VAMP4O75379 RNU6-770P-201ENST00000363929 105 ntBASIC4.01□□□□□ -1.77
VAMP4O75379 Y_RNA.288-201ENST00000364854 92 ntBASIC4.01□□□□□ -1.77
VAMP4O75379 RNU6-336P-201ENST00000364891 107 ntBASIC4.01□□□□□ -1.77
VAMP4O75379 SNORA51.11-201ENST00000384442 131 ntBASIC4.01□□□□□ -1.77
VAMP4O75379 MIR493-201ENST00000385254 89 ntBASIC4.01□□□□□ -1.77
VAMP4O75379 RN7SKP58-201ENST00000411010 305 ntBASIC4.01□□□□□ -1.77
VAMP4O75379 AC009310.1-201ENST00000414414 451 ntBASIC4.01□□□□□ -1.77
VAMP4O75379 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.01□□□□□ -1.77
VAMP4O75379 IGHV3-76-201ENST00000522465 295 ntBASIC4.01□□□□□ -1.77
VAMP4O75379 AC023157.2-201ENST00000540596 141 ntBASIC4.01□□□□□ -1.77
VAMP4O75379 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.01□□□□□ -1.77
VAMP4O75379 AC104581.2-201ENST00000572227 430 ntBASIC4.01□□□□□ -1.77
VAMP4O75379 AC024153.1-201ENST00000603103 365 ntBASIC4.01□□□□□ -1.77
VAMP4O75379 RAC1P9-201ENST00000604990 392 ntBASIC4.01□□□□□ -1.77
VAMP4O75379 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.01□□□□□ -1.77
VAMP4O75379 AL442067.1-201ENST00000613261 223 ntBASIC4.01□□□□□ -1.77
VAMP4O75379 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.01□□□□□ -1.77
VAMP4O75379 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.01□□□□□ -1.77
VAMP4O75379 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VAMP4O75379 AC233263.6-201ENST00000631132 1963 ntBASIC4.01□□□□□ -1.77
VAMP4O75379 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VAMP4O75379 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VAMP4O75379 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
VAMP4O75379 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4□□□□□ -1.77
VAMP4O75379 RNU6-778P-201ENST00000363269 103 ntBASIC4□□□□□ -1.77
VAMP4O75379 Y_RNA.222-201ENST00000364264 102 ntBASIC4□□□□□ -1.77
VAMP4O75379 Z98749.2-208ENST00000381646 500 ntBASIC4□□□□□ -1.77
VAMP4O75379 AC006026.2-201ENST00000457376 180 ntBASIC4□□□□□ -1.77
VAMP4O75379 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4□□□□□ -1.77
VAMP4O75379 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4□□□□□ -1.77
VAMP4O75379 RNU6-1183P-201ENST00000517054 60 ntBASIC4□□□□□ -1.77
VAMP4O75379 AC091144.1-201ENST00000519573 138 ntBASIC4□□□□□ -1.77
VAMP4O75379 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4□□□□□ -1.77
VAMP4O75379 AL390123.1-201ENST00000603216 237 ntBASIC4□□□□□ -1.77
VAMP4O75379 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4□□□□□ -1.77
VAMP4O75379 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4□□□□□ -1.77
VAMP4O75379 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms