Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC093331.1-201ENST00000521474 169 ntBASIC5.03□□□□□ -1.6
RNF40O75150 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.03□□□□□ -1.6
RNF40O75150 MTND6P33-201ENST00000571794 183 ntBASIC5.03□□□□□ -1.6
RNF40O75150 AC009163.5-201ENST00000575421 637 ntBASIC5.03□□□□□ -1.6
RNF40O75150 AL031274.2-201ENST00000599419 203 ntBASIC5.03□□□□□ -1.6
RNF40O75150 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF40O75150 OR14L1P-202ENST00000641545 3009 ntBASIC5.03□□□□□ -1.6
RNF40O75150 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF40O75150 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF40O75150 AC068647.1-201ENST00000489539 2265 ntBASIC5.03□□□□□ -1.6
RNF40O75150 MAPK10-286ENST00000641208 8747 ntBASIC5.03□□□□□ -1.6
RNF40O75150 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF40O75150 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RNF40O75150 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
RNF40O75150 RNU1-108P-201ENST00000362556 161 ntBASIC5.02□□□□□ -1.61
RNF40O75150 SNORD87-201ENST00000364849 89 ntBASIC5.02□□□□□ -1.61
RNF40O75150 RNU6-487P-201ENST00000365430 104 ntBASIC5.02□□□□□ -1.61
RNF40O75150 Y_RNA.558-201ENST00000384685 113 ntBASIC5.02□□□□□ -1.61
RNF40O75150 MIR325-201ENST00000385260 98 ntBASIC5.02□□□□□ -1.61
RNF40O75150 MIR208B-201ENST00000401172 77 ntBASIC5.02□□□□□ -1.61
RNF40O75150 TOMM22P2-201ENST00000430735 237 ntBASIC5.02□□□□□ -1.61
RNF40O75150 SNRPGP8-201ENST00000454064 226 ntBASIC5.02□□□□□ -1.61
RNF40O75150 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF40O75150 RPS4XP2-201ENST00000458402 793 ntBASIC5.02□□□□□ -1.61
RNF40O75150 Y_RNA.649-201ENST00000459077 103 ntBASIC5.02□□□□□ -1.61
RNF40O75150 RPL23AP56-201ENST00000460778 453 ntBASIC5.02□□□□□ -1.61
RNF40O75150 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF40O75150 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF40O75150 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.02□□□□□ -1.61
RNF40O75150 ARF4P1-201ENST00000605447 541 ntBASIC5.02□□□□□ -1.61
RNF40O75150 AC025754.2-201ENST00000606491 432 ntBASIC5.02□□□□□ -1.61
RNF40O75150 MIR6853-201ENST00000619642 74 ntBASIC5.02□□□□□ -1.61
RNF40O75150 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF40O75150 U6.115-201ENST00000636045 103 ntBASIC5.02□□□□□ -1.61
RNF40O75150 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.02□□□□□ -1.61
RNF40O75150 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNF40O75150 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF40O75150 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RNF40O75150 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RNF40O75150 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF40O75150 AC068254.2-201ENST00000623938 3577 ntBASIC5.01□□□□□ -1.61
RNF40O75150 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
RNF40O75150 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF40O75150 DLEU2_6.3-201ENST00000340052 136 ntBASIC5.01□□□□□ -1.61
RNF40O75150 U6atac.2-201ENST00000408644 118 ntBASIC5.01□□□□□ -1.61
RNF40O75150 SNORA11-201ENST00000408789 128 ntBASIC5.01□□□□□ -1.61
RNF40O75150 Y_RNA.622-201ENST00000411091 108 ntBASIC5.01□□□□□ -1.61
RNF40O75150 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.01□□□□□ -1.61
RNF40O75150 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.01□□□□□ -1.61
RNF40O75150 snoU13.24-201ENST00000458998 104 ntBASIC5.01□□□□□ -1.61
RNF40O75150 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC5.01□□□□□ -1.61
RNF40O75150 RN7SKP19-201ENST00000516016 252 ntBASIC5.01□□□□□ -1.61
RNF40O75150 AL591034.3-201ENST00000605511 685 ntBASIC5.01□□□□□ -1.61
RNF40O75150 SNORD11B-201ENST00000607707 90 ntBASIC5.01□□□□□ -1.61
RNF40O75150 DLEU2_6.2-201ENST00000620994 136 ntBASIC5.01□□□□□ -1.61
RNF40O75150 AC019206.1-201ENST00000621938 425 ntBASIC5.01□□□□□ -1.61
RNF40O75150 SNORD98-201ENST00000636377 67 ntBASIC5.01□□□□□ -1.61
RNF40O75150 AC068205.3-201ENST00000636385 468 ntBASIC5.01□□□□□ -1.61
RNF40O75150 AC018555.1-201ENST00000567548 1980 ntBASIC5.01□□□□□ -1.61
RNF40O75150 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.01□□□□□ -1.61
RNF40O75150 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF40O75150 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RNF40O75150 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
RNF40O75150 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5□□□□□ -1.61
RNF40O75150 AL590240.1-201ENST00000334118 313 ntBASIC5□□□□□ -1.61
RNF40O75150 RNU6-647P-201ENST00000364243 107 ntBASIC5□□□□□ -1.61
RNF40O75150 Y_RNA.281-201ENST00000364774 94 ntBASIC5□□□□□ -1.61
RNF40O75150 RNU6-49P-201ENST00000384256 107 ntBASIC5□□□□□ -1.61
RNF40O75150 SNORD72-201ENST00000390994 80 ntBASIC5□□□□□ -1.61
RNF40O75150 AL590762.2-201ENST00000395798 571 ntBASIC5□□□□□ -1.61
RNF40O75150 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
RNF40O75150 AL603914.1-201ENST00000401964 204 ntBASIC5□□□□□ -1.61
RNF40O75150 RNA5SP390-201ENST00000410191 113 ntBASIC5□□□□□ -1.61
RNF40O75150 HMGN2P30-201ENST00000423237 256 ntBASIC5□□□□□ -1.61
RNF40O75150 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5□□□□□ -1.61
RNF40O75150 RNU6-197P-201ENST00000516680 100 ntBASIC5□□□□□ -1.61
RNF40O75150 RNA5SP392-201ENST00000516905 112 ntBASIC5□□□□□ -1.61
RNF40O75150 AC018630.3-201ENST00000542637 96 ntBASIC5□□□□□ -1.61
RNF40O75150 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5□□□□□ -1.61
RNF40O75150 RN7SL690P-201ENST00000582087 240 ntBASIC5□□□□□ -1.61
RNF40O75150 MIR548AY-201ENST00000617669 107 ntBASIC5□□□□□ -1.61
RNF40O75150 MIR7154-201ENST00000620673 73 ntBASIC5□□□□□ -1.61
RNF40O75150 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC5□□□□□ -1.61
RNF40O75150 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5□□□□□ -1.61
RNF40O75150 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF40O75150 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF40O75150 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
RNF40O75150 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF40O75150 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF40O75150 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.99□□□□□ -1.61
RNF40O75150 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RNF40O75150 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF40O75150 RN7SKP280-201ENST00000364196 304 ntBASIC4.99□□□□□ -1.61
RNF40O75150 SNORA70.2-201ENST00000364506 135 ntBASIC4.99□□□□□ -1.61
RNF40O75150 RNA5SP515-201ENST00000364570 118 ntBASIC4.99□□□□□ -1.61
RNF40O75150 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF40O75150 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF40O75150 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF40O75150 RN7SL132P-201ENST00000478131 296 ntBASIC4.99□□□□□ -1.61
RNF40O75150 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms