Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 NDUFB4P7-201ENST00000423198 363 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 RPL21P66-201ENST00000426566 466 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 NDUFB1P1-201ENST00000435191 180 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 AC009296.1-201ENST00000443146 155 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 HMGN2P7-201ENST00000456186 273 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 AC091179.1-201ENST00000461606 579 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 AC117440.1-201ENST00000474107 571 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM13O60858 AC023141.12-201ENST00000512399 199 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 RNU6-1333P-201ENST00000516162 93 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 RN7SKP272-201ENST00000516988 232 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 AC022695.1-201ENST00000522089 237 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM13O60858 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.67□□□□□ -1.82
TRIM13O60858 AC233702.2-202ENST00000562547 291 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 AL133393.1-201ENST00000603277 287 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 AC005828.6-201ENST00000606610 232 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM13O60858 RNVU1-4-201ENST00000612985 164 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 Y_RNA.778-201ENST00000620203 90 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 AC073073.2-201ENST00000609827 2578 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM13O60858 AC010332.2-201ENST00000613083 1904 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM13O60858 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM13O60858 AC010733.2-201ENST00000589496 5702 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM13O60858 Y_RNA.23-201ENST00000362496 106 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 Y_RNA.43-201ENST00000362670 111 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 RNA5SP361-201ENST00000362686 118 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM13O60858 SNORD116-14-201ENST00000383894 92 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 SNORD116-17-201ENST00000383929 92 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 SNORD116-15-201ENST00000384445 92 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 SNORD116-20-201ENST00000384529 92 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 SNORD116-19-201ENST00000384729 92 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 MIR607-201ENST00000385241 96 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 AL390729.2-201ENST00000416137 156 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 AC024067.1-201ENST00000426199 223 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM13O60858 AC009237.7-201ENST00000447357 229 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 RN7SL459P-201ENST00000481078 302 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM13O60858 AC112693.2-201ENST00000556538 232 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 MIR3684-201ENST00000579779 74 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 AC008745.1-201ENST00000604064 271 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 AL161798.1-201ENST00000604630 131 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 MIR6867-201ENST00000610636 67 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 MIR6730-201ENST00000622213 67 ntBASIC3.66□□□□□ -1.82
TRIM13O60858 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM13O60858 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM13O60858 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
TRIM13O60858 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.65□□□□□ -1.82
TRIM13O60858 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.65□□□□□ -1.82
TRIM13O60858 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM13O60858 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM13O60858 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
TRIM13O60858 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM13O60858 SNORD115-32-201ENST00000364079 82 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 RNU4-56P-201ENST00000364700 142 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 RNU6-336P-201ENST00000364891 107 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 MIR10A-201ENST00000385043 110 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 SNORA40-201ENST00000388090 126 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM13O60858 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM13O60858 AC091390.3-201ENST00000426478 338 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 AL590383.1-201ENST00000428602 75 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 AL627311.1-201ENST00000431514 115 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 SEPT7P4-201ENST00000437076 306 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 POLR2KP2-201ENST00000438155 177 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM13O60858 RPL23AP62-201ENST00000463396 453 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 AP000873.1-201ENST00000463987 400 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 RPL31P13-201ENST00000484151 370 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 RPL21P13-201ENST00000488305 481 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 HMGB3P3-201ENST00000510526 400 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 AC005921.1-201ENST00000510589 286 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM13O60858 AC108043.1-201ENST00000512696 574 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 SNORA40.9-201ENST00000515895 93 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 RNU6-1114P-201ENST00000516022 107 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 RNU6-1256P-201ENST00000516539 103 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 RNU6-567P-201ENST00000516746 107 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM13O60858 MRPL49P2-201ENST00000521066 465 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM13O60858 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM13O60858 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM13O60858 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM13O60858 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM13O60858 RMST_6.1-201ENST00000611980 203 ntBASIC3.65□□□□□ -1.83
TRIM13O60858 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM13O60858 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM13O60858 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM13O60858 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM13O60858 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM13O60858 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms