Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 Y_RNA.399-201ENST00000383955 105 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 SNORA67.3-201ENST00000384366 140 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 RAP1BP3-201ENST00000407180 549 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 RNA5SP425-201ENST00000410336 112 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 AC074117.2-201ENST00000417130 397 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LCMT2O60294 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LCMT2O60294 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.05□□□□□ -2.08
LCMT2O60294 AL139415.2-201ENST00000431968 163 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.05□□□□□ -2.08
LCMT2O60294 TPTE2P5-203ENST00000458118 728 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 RNU6-261P-201ENST00000459506 102 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 AC087884.1-201ENST00000469738 328 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 AC079804.2-201ENST00000490376 200 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 ANXA2P1-201ENST00000505539 926 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.05□□□□□ -2.08
LCMT2O60294 MTCYBP40-201ENST00000509390 1135 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 RNU6-1038P-201ENST00000516516 104 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 Y_RNA.693-201ENST00000516641 110 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 SNORA31.25-201ENST00000517242 134 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.05□□□□□ -2.08
LCMT2O60294 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.05□□□□□ -2.08
LCMT2O60294 PSMA3P-201ENST00000555485 635 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 MIR1273D-201ENST00000577266 86 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 AC116312.1-201ENST00000606841 314 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 AC093788.1-201ENST00000609356 927 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 AC087241.4-201ENST00000612441 480 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 HULC.1-201ENST00000612720 240 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 AC073534.2-201ENST00000620377 381 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LCMT2O60294 MIR3529-201ENST00000637713 78 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.05□□□□□ -2.08
LCMT2O60294 AC099654.12-201ENST00000639868 649 ntBASIC2.05□□□□□ -2.08
LCMT2O60294 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.05□□□□□ -2.08
LCMT2O60294 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.05□□□□□ -2.08
LCMT2O60294 RNU6-266P-201ENST00000364225 107 ntBASIC2.04□□□□□ -2.08
LCMT2O60294 RNU6-1322P-201ENST00000364309 107 ntBASIC2.04□□□□□ -2.08
LCMT2O60294 RNU4-20P-201ENST00000365601 151 ntBASIC2.04□□□□□ -2.08
LCMT2O60294 RNU6-622P-201ENST00000384272 103 ntBASIC2.04□□□□□ -2.08
LCMT2O60294 SNORA64-201ENST00000384674 134 ntBASIC2.04□□□□□ -2.08
LCMT2O60294 SNORA48.3-201ENST00000391081 134 ntBASIC2.04□□□□□ -2.08
LCMT2O60294 AL606923.1-201ENST00000406616 190 ntBASIC2.04□□□□□ -2.08
LCMT2O60294 SNORA11.4-201ENST00000408823 129 ntBASIC2.04□□□□□ -2.08
LCMT2O60294 RN7SKP32-201ENST00000410167 303 ntBASIC2.04□□□□□ -2.08
LCMT2O60294 EDDM3CP-201ENST00000415977 425 ntBASIC2.04□□□□□ -2.08
LCMT2O60294 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.04□□□□□ -2.08
LCMT2O60294 DPH3P2-201ENST00000422618 250 ntBASIC2.04□□□□□ -2.08
LCMT2O60294 AIMP1P2-201ENST00000425294 312 ntBASIC2.04□□□□□ -2.08
LCMT2O60294 TOMM20P4-201ENST00000427861 435 ntBASIC2.04□□□□□ -2.08
LCMT2O60294 C8orf59P1-201ENST00000429930 303 ntBASIC2.04□□□□□ -2.08
LCMT2O60294 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.04□□□□□ -2.08
LCMT2O60294 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.04□□□□□ -2.08
LCMT2O60294 RNU7-167P-201ENST00000459160 62 ntBASIC2.04□□□□□ -2.08
LCMT2O60294 RNA5SP401-201ENST00000515920 127 ntBASIC2.04□□□□□ -2.08
LCMT2O60294 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.04□□□□□ -2.08
LCMT2O60294 MTND4P7-201ENST00000523876 130 ntBASIC2.04□□□□□ -2.08
LCMT2O60294 AL512360.1-201ENST00000555346 234 ntBASIC2.04□□□□□ -2.08
LCMT2O60294 AL118558.2-201ENST00000556294 238 ntBASIC2.04□□□□□ -2.08
LCMT2O60294 AC136619.2-201ENST00000563361 631 ntBASIC2.04□□□□□ -2.08
LCMT2O60294 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LCMT2O60294 AC097372.5-201ENST00000623665 376 ntBASIC2.04□□□□□ -2.08
LCMT2O60294 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LCMT2O60294 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCMT2O60294 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.03□□□□□ -2.08
LCMT2O60294 Y_RNA.3-201ENST00000362331 103 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 SNORD56.1-201ENST00000362913 68 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 RNU6-529P-201ENST00000363383 104 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 RNU5E-7P-201ENST00000365290 117 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 RNU6-38P-201ENST00000384085 107 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 RNU6-648P-201ENST00000410190 107 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 AL135786.1-201ENST00000415892 214 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 AC138623.1-201ENST00000418060 216 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.03□□□□□ -2.08
LCMT2O60294 OOSP1P1-201ENST00000423265 274 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 HMGN2P38-201ENST00000423806 265 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.03□□□□□ -2.08
LCMT2O60294 AL121601.2-201ENST00000438019 707 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.03□□□□□ -2.08
LCMT2O60294 RNU6-333P-201ENST00000459117 107 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 AC117503.1-201ENST00000472241 394 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.03□□□□□ -2.08
LCMT2O60294 AC055731.1-201ENST00000474387 401 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.03□□□□□ -2.08
LCMT2O60294 AC090255.1-201ENST00000495779 349 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 RNU6-720P-201ENST00000516363 108 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 RNU6-506P-201ENST00000516553 94 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 AC023050.3-201ENST00000541142 333 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 AC007229.1-201ENST00000590455 412 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 AL713866.2-201ENST00000603579 219 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 AC096772.1-201ENST00000609146 564 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 AC022202.1-201ENST00000613515 211 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 MIR6132-201ENST00000622083 109 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 U4.7-201ENST00000638126 106 ntBASIC2.03□□□□□ -2.08
LCMT2O60294 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.03□□□□□ -2.08
LCMT2O60294 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LCMT2O60294 Y_RNA.40-201ENST00000362645 93 ntBASIC2.02□□□□□ -2.09
LCMT2O60294 SNORD114-19-201ENST00000363072 75 ntBASIC2.02□□□□□ -2.09
LCMT2O60294 RNU6-483P-201ENST00000384088 108 ntBASIC2.02□□□□□ -2.09
LCMT2O60294 Y_RNA.481-201ENST00000384373 102 ntBASIC2.02□□□□□ -2.09
LCMT2O60294 HMGB3P2-201ENST00000411913 584 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms