Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.06□□□□□ -2.4
SSSCA1O60232 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.06□□□□□ -2.4
SSSCA1O60232 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.06□□□□□ -2.4
SSSCA1O60232 MTCYBP33-201ENST00000575007 1130 ntBASIC0.06□□□□□ -2.4
SSSCA1O60232 MIR4711-201ENST00000578274 70 ntBASIC0.06□□□□□ -2.4
SSSCA1O60232 AC060771.1-201ENST00000582031 164 ntBASIC0.06□□□□□ -2.4
SSSCA1O60232 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.06□□□□□ -2.4
SSSCA1O60232 BNIP3P8-201ENST00000597863 560 ntBASIC0.06□□□□□ -2.4
SSSCA1O60232 RAC1P9-201ENST00000604990 392 ntBASIC0.06□□□□□ -2.4
SSSCA1O60232 AC242852.1-201ENST00000612151 96 ntBASIC0.06□□□□□ -2.4
SSSCA1O60232 MIR6504-201ENST00000613520 61 ntBASIC0.06□□□□□ -2.4
SSSCA1O60232 AC244015.1-201ENST00000622301 99 ntBASIC0.06□□□□□ -2.4
SSSCA1O60232 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.05□□□□□ -2.4
SSSCA1O60232 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.05□□□□□ -2.4
SSSCA1O60232 SNRPEP3-201ENST00000338402 276 ntBASIC0.05□□□□□ -2.4
SSSCA1O60232 MIRLET7D-201ENST00000362263 87 ntBASIC0.05□□□□□ -2.4
SSSCA1O60232 SNORD56.4-201ENST00000363883 71 ntBASIC0.05□□□□□ -2.4
SSSCA1O60232 RNU2-23P-201ENST00000410545 195 ntBASIC0.05□□□□□ -2.4
SSSCA1O60232 AC245047.7-201ENST00000440265 293 ntBASIC0.05□□□□□ -2.4
SSSCA1O60232 MTND1P30-201ENST00000441241 901 ntBASIC0.05□□□□□ -2.4
SSSCA1O60232 FTH1P25-201ENST00000447665 469 ntBASIC0.05□□□□□ -2.4
SSSCA1O60232 MTCYBP1-201ENST00000454315 1119 ntBASIC0.05□□□□□ -2.4
SSSCA1O60232 snoU13.14-201ENST00000459372 104 ntBASIC0.05□□□□□ -2.4
SSSCA1O60232 RPL39P38-201ENST00000467018 153 ntBASIC0.05□□□□□ -2.4
SSSCA1O60232 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.05□□□□□ -2.4
SSSCA1O60232 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.05□□□□□ -2.4
SSSCA1O60232 AC024589.1-201ENST00000512207 263 ntBASIC0.05□□□□□ -2.4
SSSCA1O60232 SNORA31.19-201ENST00000517079 126 ntBASIC0.05□□□□□ -2.4
SSSCA1O60232 AC087854.1-201ENST00000519706 414 ntBASIC0.05□□□□□ -2.4
SSSCA1O60232 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.05□□□□□ -2.4
SSSCA1O60232 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.05□□□□□ -2.4
SSSCA1O60232 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.05□□□□□ -2.4
SSSCA1O60232 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.05□□□□□ -2.4
SSSCA1O60232 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.05□□□□□ -2.4
SSSCA1O60232 AC090330.1-201ENST00000588646 764 ntBASIC0.05□□□□□ -2.4
SSSCA1O60232 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.05□□□□□ -2.4
SSSCA1O60232 AL359740.1-201ENST00000624340 592 ntBASIC0.05□□□□□ -2.4
SSSCA1O60232 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.05□□□□□ -2.4
SSSCA1O60232 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
SSSCA1O60232 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.04□□□□□ -2.4
SSSCA1O60232 MIR340-201ENST00000362125 95 ntBASIC0.04□□□□□ -2.4
SSSCA1O60232 RNU6-862P-201ENST00000362804 105 ntBASIC0.04□□□□□ -2.4
SSSCA1O60232 RNU6-487P-201ENST00000365430 104 ntBASIC0.04□□□□□ -2.4
SSSCA1O60232 RNU6-45P-201ENST00000384471 107 ntBASIC0.04□□□□□ -2.4
SSSCA1O60232 MTCO1P56-201ENST00000401674 224 ntBASIC0.04□□□□□ -2.4
SSSCA1O60232 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.04□□□□□ -2.4
SSSCA1O60232 RPS3AP37-201ENST00000419176 745 ntBASIC0.04□□□□□ -2.4
SSSCA1O60232 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.04□□□□□ -2.4
SSSCA1O60232 AC011233.1-201ENST00000422812 283 ntBASIC0.04□□□□□ -2.4
SSSCA1O60232 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.04□□□□□ -2.4
SSSCA1O60232 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.04□□□□□ -2.4
SSSCA1O60232 RPEP5-201ENST00000441137 268 ntBASIC0.04□□□□□ -2.4
SSSCA1O60232 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.04□□□□□ -2.4
SSSCA1O60232 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.04□□□□□ -2.4
SSSCA1O60232 AC105758.1-201ENST00000506038 399 ntBASIC0.04□□□□□ -2.4
SSSCA1O60232 AC104806.1-201ENST00000508720 308 ntBASIC0.04□□□□□ -2.4
SSSCA1O60232 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.04□□□□□ -2.4
SSSCA1O60232 AC105313.1-201ENST00000509121 353 ntBASIC0.04□□□□□ -2.4
SSSCA1O60232 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
SSSCA1O60232 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.04□□□□□ -2.4
SSSCA1O60232 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.04□□□□□ -2.4
SSSCA1O60232 EIF1AXP2-201ENST00000555940 413 ntBASIC0.04□□□□□ -2.4
SSSCA1O60232 MIR4709-201ENST00000577272 72 ntBASIC0.04□□□□□ -2.4
SSSCA1O60232 AC068620.3-201ENST00000602749 560 ntBASIC0.04□□□□□ -2.4
SSSCA1O60232 AP002906.1-201ENST00000603405 233 ntBASIC0.04□□□□□ -2.4
SSSCA1O60232 AC012557.2-201ENST00000605919 418 ntBASIC0.04□□□□□ -2.4
SSSCA1O60232 AC092656.1-203ENST00000624134 423 ntBASIC0.04□□□□□ -2.4
SSSCA1O60232 RNU1-96P-201ENST00000364163 162 ntBASIC0.03□□□□□ -2.4
SSSCA1O60232 RNU6-1327P-201ENST00000365302 105 ntBASIC0.03□□□□□ -2.4
SSSCA1O60232 RNU6-622P-201ENST00000384272 103 ntBASIC0.03□□□□□ -2.4
SSSCA1O60232 RNU6-1207P-201ENST00000384343 107 ntBASIC0.03□□□□□ -2.4
SSSCA1O60232 SNORA80D-201ENST00000384488 135 ntBASIC0.03□□□□□ -2.4
SSSCA1O60232 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.03□□□□□ -2.4
SSSCA1O60232 SNORD99-201ENST00000408612 74 ntBASIC0.03□□□□□ -2.4
SSSCA1O60232 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.03□□□□□ -2.4
SSSCA1O60232 RPS20P10-201ENST00000451209 253 ntBASIC0.03□□□□□ -2.4
SSSCA1O60232 RNU7-140P-201ENST00000459546 60 ntBASIC0.03□□□□□ -2.4
SSSCA1O60232 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.03□□□□□ -2.4
SSSCA1O60232 MIR449C-201ENST00000516047 92 ntBASIC0.03□□□□□ -2.4
SSSCA1O60232 SUMO2P16-201ENST00000519475 264 ntBASIC0.03□□□□□ -2.4
SSSCA1O60232 AC025678.1-201ENST00000567861 338 ntBASIC0.03□□□□□ -2.4
SSSCA1O60232 AC126365.2-201ENST00000580630 379 ntBASIC0.03□□□□□ -2.4
SSSCA1O60232 MIR4452-201ENST00000583004 71 ntBASIC0.03□□□□□ -2.4
SSSCA1O60232 AL031281.1-201ENST00000604049 488 ntBASIC0.03□□□□□ -2.4
SSSCA1O60232 AL356094.1-201ENST00000624663 1212 ntBASIC0.03□□□□□ -2.4
SSSCA1O60232 Z69720.2-201ENST00000624755 279 ntBASIC0.03□□□□□ -2.4
SSSCA1O60232 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.03□□□□□ -2.4
SSSCA1O60232 RNU6-1123P-201ENST00000362347 106 ntBASIC0.02□□□□□ -2.41
SSSCA1O60232 RNU6-343P-201ENST00000364709 104 ntBASIC0.02□□□□□ -2.41
SSSCA1O60232 RNU1-133P-201ENST00000364867 167 ntBASIC0.02□□□□□ -2.41
SSSCA1O60232 SNORA4.2-201ENST00000365313 147 ntBASIC0.02□□□□□ -2.41
SSSCA1O60232 MIR216A-201ENST00000385063 110 ntBASIC0.02□□□□□ -2.41
SSSCA1O60232 MIR936-201ENST00000401264 98 ntBASIC0.02□□□□□ -2.41
SSSCA1O60232 RPL21P24-201ENST00000413752 448 ntBASIC0.02□□□□□ -2.41
SSSCA1O60232 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.02□□□□□ -2.41
SSSCA1O60232 ELOCP9-201ENST00000418624 239 ntBASIC0.02□□□□□ -2.41
SSSCA1O60232 AC123900.1-201ENST00000420390 96 ntBASIC0.02□□□□□ -2.41
SSSCA1O60232 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.02□□□□□ -2.41
SSSCA1O60232 USP9YP14-201ENST00000430663 563 ntBASIC0.02□□□□□ -2.41
SSSCA1O60232 MTCO3P29-201ENST00000432119 779 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms