Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.16□□□□□ -2.38
CHD1O14646 AC116655.1-201ENST00000508324 901 ntBASIC0.16□□□□□ -2.38
CHD1O14646 AC048346.1-201ENST00000510247 144 ntBASIC0.16□□□□□ -2.38
CHD1O14646 MTCYBP43-201ENST00000513621 740 ntBASIC0.16□□□□□ -2.38
CHD1O14646 AC090502.2-201ENST00000549267 280 ntBASIC0.16□□□□□ -2.38
CHD1O14646 AL121579.1-201ENST00000555129 305 ntBASIC0.16□□□□□ -2.38
CHD1O14646 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.16□□□□□ -2.38
CHD1O14646 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.16□□□□□ -2.38
CHD1O14646 AC093913.1-201ENST00000614178 329 ntBASIC0.16□□□□□ -2.38
CHD1O14646 AL158163.2-201ENST00000619110 700 ntBASIC0.16□□□□□ -2.38
CHD1O14646 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.16□□□□□ -2.38
CHD1O14646 Y_RNA.552-201ENST00000384665 112 ntBASIC0.16□□□□□ -2.38
CHD1O14646 AC008267.5-201ENST00000424928 265 ntBASIC0.16□□□□□ -2.38
CHD1O14646 CETN4P-201ENST00000432407 469 ntBASIC0.16□□□□□ -2.38
CHD1O14646 RPL36AP53-201ENST00000432891 316 ntBASIC0.16□□□□□ -2.38
CHD1O14646 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.16□□□□□ -2.38
CHD1O14646 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.16□□□□□ -2.38
CHD1O14646 MTCO2P15-201ENST00000532655 656 ntBASIC0.16□□□□□ -2.38
CHD1O14646 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.16□□□□□ -2.38
CHD1O14646 AC025423.5-201ENST00000550230 219 ntBASIC0.16□□□□□ -2.38
CHD1O14646 HMGB1P33-201ENST00000563485 527 ntBASIC0.16□□□□□ -2.38
CHD1O14646 MIR4723-201ENST00000585070 81 ntBASIC0.16□□□□□ -2.38
CHD1O14646 AC105129.3-201ENST00000605455 485 ntBASIC0.16□□□□□ -2.38
CHD1O14646 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.15□□□□□ -2.39
CHD1O14646 MIR411-201ENST00000362239 96 ntBASIC0.15□□□□□ -2.39
CHD1O14646 RNU6-910P-201ENST00000390844 107 ntBASIC0.15□□□□□ -2.39
CHD1O14646 RNU6-754P-201ENST00000391166 107 ntBASIC0.15□□□□□ -2.39
CHD1O14646 MIR942-201ENST00000401111 86 ntBASIC0.15□□□□□ -2.39
CHD1O14646 AC060773.1-201ENST00000421698 310 ntBASIC0.15□□□□□ -2.39
CHD1O14646 AC113410.1-201ENST00000505029 247 ntBASIC0.15□□□□□ -2.39
CHD1O14646 RNU6-416P-201ENST00000516265 103 ntBASIC0.15□□□□□ -2.39
CHD1O14646 RNU6-965P-201ENST00000516721 96 ntBASIC0.15□□□□□ -2.39
CHD1O14646 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.15□□□□□ -2.39
CHD1O14646 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.15□□□□□ -2.39
CHD1O14646 PCMTD1P7-201ENST00000634506 357 ntBASIC0.15□□□□□ -2.39
CHD1O14646 AC023934.1-201ENST00000574529 2389 ntBASIC0.15□□□□□ -2.39
CHD1O14646 RNU6-891P-201ENST00000384280 111 ntBASIC0.14□□□□□ -2.39
CHD1O14646 MIR520A-201ENST00000384862 85 ntBASIC0.14□□□□□ -2.39
CHD1O14646 MIR604-201ENST00000384880 94 ntBASIC0.14□□□□□ -2.39
CHD1O14646 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
CHD1O14646 AC063976.4-201ENST00000421971 163 ntBASIC0.14□□□□□ -2.39
CHD1O14646 MTND1P28-201ENST00000435623 950 ntBASIC0.14□□□□□ -2.39
CHD1O14646 MTND2P21-201ENST00000436242 1042 ntBASIC0.14□□□□□ -2.39
CHD1O14646 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.14□□□□□ -2.39
CHD1O14646 MTCO3P18-201ENST00000440206 761 ntBASIC0.14□□□□□ -2.39
CHD1O14646 MTCO3P7-201ENST00000510008 774 ntBASIC0.14□□□□□ -2.39
CHD1O14646 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.14□□□□□ -2.39
CHD1O14646 RNU2-53P-201ENST00000516257 147 ntBASIC0.14□□□□□ -2.39
CHD1O14646 Y_RNA.700-201ENST00000516806 100 ntBASIC0.14□□□□□ -2.39
CHD1O14646 ACA59.2-201ENST00000517061 156 ntBASIC0.14□□□□□ -2.39
CHD1O14646 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.14□□□□□ -2.39
CHD1O14646 AC107952.2-201ENST00000606048 486 ntBASIC0.14□□□□□ -2.39
CHD1O14646 RMST_4.1-201ENST00000616886 107 ntBASIC0.14□□□□□ -2.39
CHD1O14646 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.14□□□□□ -2.39
CHD1O14646 AC068205.3-201ENST00000636385 468 ntBASIC0.14□□□□□ -2.39
CHD1O14646 U6.101-201ENST00000637707 76 ntBASIC0.14□□□□□ -2.39
CHD1O14646 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.13□□□□□ -2.39
CHD1O14646 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.13□□□□□ -2.39
CHD1O14646 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.13□□□□□ -2.39
CHD1O14646 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.13□□□□□ -2.39
CHD1O14646 AC091489.2-201ENST00000566263 604 ntBASIC0.13□□□□□ -2.39
CHD1O14646 VN1R83P-201ENST00000595685 445 ntBASIC0.13□□□□□ -2.39
CHD1O14646 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
CHD1O14646 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
CHD1O14646 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.13□□□□□ -2.39
CHD1O14646 MIR101-1-201ENST00000362265 75 ntBASIC0.13□□□□□ -2.39
CHD1O14646 AC092170.1-201ENST00000440211 356 ntBASIC0.13□□□□□ -2.39
CHD1O14646 MTND1P3-201ENST00000484956 952 ntBASIC0.13□□□□□ -2.39
CHD1O14646 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.13□□□□□ -2.39
CHD1O14646 AC005951.2-201ENST00000576282 495 ntBASIC0.13□□□□□ -2.39
CHD1O14646 AC004853.1-201ENST00000604902 698 ntBASIC0.13□□□□□ -2.39
CHD1O14646 RNU6-87P-201ENST00000607561 108 ntBASIC0.13□□□□□ -2.39
CHD1O14646 RNU6-23P-201ENST00000363283 107 ntBASIC0.12□□□□□ -2.39
CHD1O14646 RNU6-1305P-201ENST00000364353 104 ntBASIC0.12□□□□□ -2.39
CHD1O14646 RNU6-296P-201ENST00000384608 107 ntBASIC0.12□□□□□ -2.39
CHD1O14646 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
CHD1O14646 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
CHD1O14646 AL133475.1-201ENST00000404414 305 ntBASIC0.12□□□□□ -2.39
CHD1O14646 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.12□□□□□ -2.39
CHD1O14646 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.12□□□□□ -2.39
CHD1O14646 AC013828.1-201ENST00000481845 158 ntBASIC0.12□□□□□ -2.39
CHD1O14646 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.12□□□□□ -2.39
CHD1O14646 AC093519.1-201ENST00000566109 298 ntBASIC0.12□□□□□ -2.39
CHD1O14646 AC040896.1-201ENST00000613819 479 ntBASIC0.12□□□□□ -2.39
CHD1O14646 AL603758.1-201ENST00000618654 241 ntBASIC0.12□□□□□ -2.39
CHD1O14646 AC009269.6-201ENST00000621778 588 ntBASIC0.12□□□□□ -2.39
CHD1O14646 AC019226.1-201ENST00000625666 515 ntBASIC0.12□□□□□ -2.39
CHD1O14646 RNU6-743P-201ENST00000364151 106 ntBASIC0.11□□□□□ -2.39
CHD1O14646 AL606662.1-201ENST00000445763 553 ntBASIC0.11□□□□□ -2.39
CHD1O14646 AC092001.1-201ENST00000453012 261 ntBASIC0.11□□□□□ -2.39
CHD1O14646 AC098869.1-201ENST00000481627 292 ntBASIC0.11□□□□□ -2.39
CHD1O14646 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.11□□□□□ -2.39
CHD1O14646 AC010587.2-201ENST00000511727 448 ntBASIC0.11□□□□□ -2.39
CHD1O14646 RN7SKP256-201ENST00000517201 314 ntBASIC0.11□□□□□ -2.39
CHD1O14646 MIR4768-201ENST00000585270 74 ntBASIC0.11□□□□□ -2.39
CHD1O14646 AL118556.2-201ENST00000614375 824 ntBASIC0.11□□□□□ -2.39
CHD1O14646 SGO1P1-201ENST00000603525 1447 ntBASIC0.11□□□□□ -2.39
CHD1O14646 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
CHD1O14646 RNU6-223P-201ENST00000362830 107 ntBASIC0.1□□□□□ -2.39
CHD1O14646 RNU6-944P-201ENST00000364023 107 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms