Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.81□□□□□ -2.28
SDCBPO00560 AL078604.3-201ENST00000615580 211 ntBASIC0.81□□□□□ -2.28
SDCBPO00560 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.81□□□□□ -2.28
SDCBPO00560 MIR8063-201ENST00000621930 81 ntBASIC0.81□□□□□ -2.28
SDCBPO00560 RMST_7.1-201ENST00000621935 268 ntBASIC0.81□□□□□ -2.28
SDCBPO00560 AC007792.1-201ENST00000623023 402 ntBASIC0.81□□□□□ -2.28
SDCBPO00560 SCARNA4-202ENST00000625402 129 ntBASIC0.81□□□□□ -2.28
SDCBPO00560 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SDCBPO00560 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
SDCBPO00560 LINC02555-201ENST00000563933 1951 ntBASIC0.81□□□□□ -2.28
SDCBPO00560 AL445523.1-201ENST00000451184 1362 ntBASIC0.81□□□□□ -2.28
SDCBPO00560 OR4G2P-201ENST00000328113 903 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 Y_RNA.97-201ENST00000363094 102 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 RNU6-414P-201ENST00000363705 104 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 SNORD32B-201ENST00000364460 84 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 RNU6-53P-201ENST00000365367 106 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 RNU6-1179P-201ENST00000384667 107 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 MIR548B-201ENST00000385247 97 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 AC114491.1-201ENST00000416095 246 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.8□□□□□ -2.28
SDCBPO00560 AL353777.1-201ENST00000425552 326 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 Z82205.1-201ENST00000428456 297 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 MTND1P30-201ENST00000441241 901 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.8□□□□□ -2.28
SDCBPO00560 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.8□□□□□ -2.28
SDCBPO00560 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.8□□□□□ -2.28
SDCBPO00560 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.8□□□□□ -2.28
SDCBPO00560 RPL30P7-201ENST00000479312 323 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.8□□□□□ -2.28
SDCBPO00560 RNU5F-2P-201ENST00000516066 82 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 RNU6-1003P-201ENST00000517099 105 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 AC019176.1-201ENST00000518519 225 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 AC090115.3-201ENST00000553218 849 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 AC091135.1-201ENST00000585943 307 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 AL391001.1-201ENST00000602747 715 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 HSPE1P19-201ENST00000603327 295 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 AC069431.2-201ENST00000604149 1099 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 AL158032.1-201ENST00000605401 106 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 AC080078.3-201ENST00000605407 463 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
SDCBPO00560 AP000484.1-201ENST00000620067 1252 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 AL138955.1-201ENST00000622881 1040 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 FRG1KP-201ENST00000623592 341 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.8□□□□□ -2.28
SDCBPO00560 MTND5P9-201ENST00000503854 1755 ntBASIC0.8□□□□□ -2.28
SDCBPO00560 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.8□□□□□ -2.28
SDCBPO00560 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SDCBPO00560 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.79□□□□□ -2.28
SDCBPO00560 ICE2P2-201ENST00000483823 2787 ntBASIC0.79□□□□□ -2.28
SDCBPO00560 RNU4-15P-201ENST00000362613 141 ntBASIC0.79□□□□□ -2.28
SDCBPO00560 SNORA25.8-201ENST00000364831 128 ntBASIC0.79□□□□□ -2.28
SDCBPO00560 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.79□□□□□ -2.28
SDCBPO00560 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.79□□□□□ -2.28
SDCBPO00560 UBE2V1P8-201ENST00000437166 265 ntBASIC0.79□□□□□ -2.28
SDCBPO00560 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.79□□□□□ -2.28
SDCBPO00560 AC027119.1-201ENST00000440877 241 ntBASIC0.79□□□□□ -2.28
SDCBPO00560 DYNLT3P2-201ENST00000442517 295 ntBASIC0.79□□□□□ -2.28
SDCBPO00560 RPL39P29-201ENST00000447779 157 ntBASIC0.79□□□□□ -2.28
SDCBPO00560 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.79□□□□□ -2.28
SDCBPO00560 OR2AQ1P-201ENST00000451972 200 ntBASIC0.79□□□□□ -2.28
SDCBPO00560 ART2BP-201ENST00000453501 499 ntBASIC0.79□□□□□ -2.28
SDCBPO00560 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.79□□□□□ -2.28
SDCBPO00560 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.79□□□□□ -2.28
SDCBPO00560 RNU6-333P-201ENST00000459117 107 ntBASIC0.79□□□□□ -2.28
SDCBPO00560 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.79□□□□□ -2.28
SDCBPO00560 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.79□□□□□ -2.28
SDCBPO00560 AC097473.1-201ENST00000508142 408 ntBASIC0.79□□□□□ -2.28
SDCBPO00560 RNU6-123P-201ENST00000516163 102 ntBASIC0.79□□□□□ -2.28
SDCBPO00560 RNU6-201P-201ENST00000517100 61 ntBASIC0.79□□□□□ -2.28
SDCBPO00560 RNA5SP490-201ENST00000517141 136 ntBASIC0.79□□□□□ -2.28
SDCBPO00560 RNA5SP437-201ENST00000517249 129 ntBASIC0.79□□□□□ -2.28
SDCBPO00560 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.79□□□□□ -2.28
SDCBPO00560 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
SDCBPO00560 MIR548AC-201ENST00000585049 88 ntBASIC0.79□□□□□ -2.28
SDCBPO00560 AC098848.2-201ENST00000588023 330 ntBASIC0.79□□□□□ -2.28
SDCBPO00560 AP003465.2-201ENST00000602571 373 ntBASIC0.79□□□□□ -2.28
SDCBPO00560 AL136363.2-201ENST00000604173 851 ntBASIC0.79□□□□□ -2.28
SDCBPO00560 AL139418.1-201ENST00000613613 177 ntBASIC0.79□□□□□ -2.28
SDCBPO00560 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.79□□□□□ -2.28
SDCBPO00560 RNU6-78P-201ENST00000362897 107 ntBASIC0.78□□□□□ -2.28
SDCBPO00560 EEF1A1P40-201ENST00000412883 573 ntBASIC0.78□□□□□ -2.28
SDCBPO00560 RPL21P111-201ENST00000418453 477 ntBASIC0.78□□□□□ -2.28
SDCBPO00560 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.78□□□□□ -2.28
SDCBPO00560 C8orf59P1-201ENST00000429930 303 ntBASIC0.78□□□□□ -2.28
SDCBPO00560 JTBP1-201ENST00000441314 247 ntBASIC0.78□□□□□ -2.28
SDCBPO00560 USP9YP25-201ENST00000457708 443 ntBASIC0.78□□□□□ -2.28
SDCBPO00560 RPL39P28-201ENST00000465655 155 ntBASIC0.78□□□□□ -2.28
SDCBPO00560 AC134050.1-201ENST00000495088 933 ntBASIC0.78□□□□□ -2.28
SDCBPO00560 AC108729.3-201ENST00000513484 108 ntBASIC0.78□□□□□ -2.28
SDCBPO00560 RNU2-10P-201ENST00000516375 211 ntBASIC0.78□□□□□ -2.28
SDCBPO00560 RNU6-467P-201ENST00000517027 110 ntBASIC0.78□□□□□ -2.28
SDCBPO00560 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.78□□□□□ -2.28
SDCBPO00560 AC022616.6-201ENST00000520479 119 ntBASIC0.78□□□□□ -2.28
SDCBPO00560 MTND2P7-201ENST00000521337 640 ntBASIC0.78□□□□□ -2.28
SDCBPO00560 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.78□□□□□ -2.28
SDCBPO00560 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.78□□□□□ -2.28
SDCBPO00560 TRAV32-201ENST00000553993 340 ntBASIC0.78□□□□□ -2.28
SDCBPO00560 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.78□□□□□ -2.28
SDCBPO00560 AP001004.1-201ENST00000582468 324 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms