Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 RNU6-336P-201ENST00000364891 107 ntBASIC2.33□□□□□ -2.04
CCDC188H7C350 RNA5SP184-201ENST00000411071 108 ntBASIC2.33□□□□□ -2.04
CCDC188H7C350 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.33□□□□□ -2.04
CCDC188H7C350 USP9YP8-201ENST00000441913 500 ntBASIC2.33□□□□□ -2.04
CCDC188H7C350 MTCO3P38-201ENST00000468910 766 ntBASIC2.33□□□□□ -2.04
CCDC188H7C350 AC068781.1-201ENST00000488231 618 ntBASIC2.33□□□□□ -2.04
CCDC188H7C350 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC188H7C350 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC188H7C350 AC009646.1-201ENST00000510455 318 ntBASIC2.33□□□□□ -2.04
CCDC188H7C350 SNORA4.4-201ENST00000515921 135 ntBASIC2.33□□□□□ -2.04
CCDC188H7C350 IMMP1LP2-201ENST00000552954 492 ntBASIC2.33□□□□□ -2.04
CCDC188H7C350 AC103996.1-201ENST00000555468 102 ntBASIC2.33□□□□□ -2.04
CCDC188H7C350 MYL12BP1-201ENST00000569826 507 ntBASIC2.33□□□□□ -2.04
CCDC188H7C350 AC103987.3-201ENST00000582071 292 ntBASIC2.33□□□□□ -2.04
CCDC188H7C350 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
CCDC188H7C350 AC015540.1-201ENST00000615828 501 ntBASIC2.33□□□□□ -2.04
CCDC188H7C350 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CCDC188H7C350 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC188H7C350 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC188H7C350 Y_RNA.40-201ENST00000362645 93 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 RNU6-623P-201ENST00000363143 105 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 RNU6-1222P-201ENST00000384615 107 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 MIR29B2-201ENST00000385055 81 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 SNORA48.3-201ENST00000391081 134 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 CALM2P3-201ENST00000400429 449 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 AL591034.2-201ENST00000402839 359 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC188H7C350 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC188H7C350 SEPT14P3-201ENST00000439401 183 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC188H7C350 AC007969.2-201ENST00000441891 191 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 AL732372.2-207ENST00000445840 183 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 SEPT14P2-201ENST00000453405 183 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 RPL21P99-201ENST00000480369 423 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 CCDC34P1-201ENST00000507441 517 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 SEPT14P4-201ENST00000513445 186 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC188H7C350 FO082796.1-201ENST00000523795 183 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 AC115990.1-201ENST00000526957 301 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 CYCSP27-201ENST00000527643 293 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 MTCO3P23-201ENST00000561363 289 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 AL357078.3-201ENST00000607528 618 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 AC046143.2-201ENST00000609789 160 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 AC093783.1-201ENST00000612976 329 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 MIR6715A-201ENST00000615929 79 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 IGHVIII-44-202ENST00000636235 289 ntBASIC2.32□□□□□ -2.04
CCDC188H7C350 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CCDC188H7C350 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
CCDC188H7C350 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC188H7C350 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CCDC188H7C350 AC062016.1-201ENST00000355719 319 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 RNA5SP432-201ENST00000362480 116 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 RNU1-23P-201ENST00000363361 144 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 RNA5SP68-201ENST00000363885 119 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 SNORA3A-201ENST00000364113 130 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 MIR196B-201ENST00000384852 84 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 CBX3P9-201ENST00000402326 552 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 POLHP1-201ENST00000411806 470 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC188H7C350 OOSP1P1-201ENST00000423265 274 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC188H7C350 TIMM9P3-201ENST00000428659 274 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 RPS15AP10-201ENST00000432472 382 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC188H7C350 AC011753.1-201ENST00000451001 220 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 RPS3P1-201ENST00000456781 192 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 RNU7-138P-201ENST00000459479 64 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 HMGB3P3-201ENST00000510526 400 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 RNU6-1281P-201ENST00000516223 105 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 Y_RNA.693-201ENST00000516641 110 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 Y_RNA.704-201ENST00000516851 102 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 RNU6-323P-201ENST00000521915 107 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 CENPUP1-201ENST00000526649 1202 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 AC118273.2-201ENST00000532092 465 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 AC090115.3-201ENST00000553218 849 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC188H7C350 MIR4435-1-201ENST00000582552 80 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 BNIP3P16-201ENST00000589779 534 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC188H7C350 MIR6817-201ENST00000615588 66 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 AL359757.2-201ENST00000624309 274 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 AC099654.12-201ENST00000639868 649 ntBASIC2.31□□□□□ -2.04
CCDC188H7C350 RNU4-40P-201ENST00000364351 143 ntBASIC2.3□□□□□ -2.04
CCDC188H7C350 Y_RNA.318-201ENST00000365131 97 ntBASIC2.3□□□□□ -2.04
CCDC188H7C350 Y_RNA.372-201ENST00000365599 102 ntBASIC2.3□□□□□ -2.04
CCDC188H7C350 RNU6-1274P-201ENST00000384557 107 ntBASIC2.3□□□□□ -2.04
CCDC188H7C350 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CCDC188H7C350 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC188H7C350 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC188H7C350 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC188H7C350 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC188H7C350 snoU13.14-201ENST00000459372 104 ntBASIC2.3□□□□□ -2.04
CCDC188H7C350 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC188H7C350 SNORA19.2-201ENST00000516013 114 ntBASIC2.3□□□□□ -2.04
CCDC188H7C350 RNU6-506P-201ENST00000516553 94 ntBASIC2.3□□□□□ -2.04
CCDC188H7C350 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC188H7C350 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC188H7C350 AP000763.2-201ENST00000540641 163 ntBASIC2.3□□□□□ -2.04
CCDC188H7C350 AL512310.1-201ENST00000548639 172 ntBASIC2.3□□□□□ -2.04
CCDC188H7C350 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms