Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 SNRPFP3-201ENST00000457792 225 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 GMFBP1-201ENST00000467831 427 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 CCDC34P1-201ENST00000507441 517 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 SMURF2P1-201ENST00000514992 481 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 RNA5SP401-201ENST00000515920 127 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 RNU2-69P-201ENST00000516061 100 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 RNU6-314P-201ENST00000516574 104 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 SCARNA11.3-201ENST00000517276 130 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 OR5AQ1P-201ENST00000527596 927 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 AC104383.1-201ENST00000530297 370 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 CYCSP26-201ENST00000534107 320 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 MIR3616-201ENST00000584070 92 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 AC123912.5-201ENST00000605470 343 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 AL121917.1-203ENST00000605534 577 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 AC002044.1-201ENST00000606707 158 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 AC017083.3-201ENST00000609955 700 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 AC097372.5-201ENST00000623665 376 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 AP003400.5-201ENST00000624827 617 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNU6-37P-201ENST00000362692 107 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNU6-11P-201ENST00000364234 107 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 Y_RNA.238-201ENST00000364441 102 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 Y_RNA.255-201ENST00000364581 97 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNA5SP138-201ENST00000365098 114 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 Y_RNA.324-201ENST00000365165 102 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNU6-25P-201ENST00000383873 107 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 SNORA69-201ENST00000383895 132 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNU6-1-201ENST00000383898 107 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNU6-48P-201ENST00000384161 107 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNU6-36P-201ENST00000384172 107 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNU6-4P-201ENST00000384205 107 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNU6-5P-201ENST00000384238 107 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNU6-3P-201ENST00000384314 107 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNU6-517P-201ENST00000384362 110 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNU6-16P-201ENST00000384385 107 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 SNORD116-20-201ENST00000384529 92 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNU6-15P-201ENST00000384534 107 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNU6-2-201ENST00000384627 107 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNU6-29P-201ENST00000384637 107 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNU6-9-201ENST00000384776 107 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNU6-33P-201ENST00000384793 107 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNU6-220P-201ENST00000390919 107 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNU2-29P-201ENST00000410423 189 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNA5SP338-201ENST00000410495 85 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 AL445685.2-201ENST00000422551 342 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RPL30P4-201ENST00000429309 333 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 NDUFB1P2-201ENST00000449477 176 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNU7-180P-201ENST00000459240 63 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RPL23AP63-201ENST00000498752 471 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 AC104136.1-201ENST00000512969 394 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 SNORA40.12-201ENST00000516329 111 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 AC016957.1-201ENST00000534895 309 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 MIR5002-201ENST00000584713 97 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 AC008749.1-201ENST00000597650 306 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 AP000942.3-201ENST00000603702 160 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 AL670379.10-201ENST00000604330 253 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 AL670379.9-201ENST00000605428 253 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 AC016727.1-205ENST00000605437 569 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 AC012557.2-201ENST00000605919 418 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RNU6-6P-201ENST00000606623 107 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 HULC.1-201ENST00000612720 240 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 AC015540.1-201ENST00000615828 501 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 AC026585.1-201ENST00000619582 524 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 AC005609.4-201ENST00000625071 447 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 RBBP8P1-201ENST00000449447 1844 ntBASIC1.79□□□□□ -2.12
NKX2-6A6NCS4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 MTND4P14-201ENST00000435799 1354 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 RNU6-1085P-201ENST00000363576 107 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 RNU6-1090P-201ENST00000364065 94 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 RNA5SP160-201ENST00000364866 120 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 RNU6-1083P-201ENST00000384022 107 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 RNU6-483P-201ENST00000384088 108 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 SNORD37.1-201ENST00000390968 65 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 MTCO1P21-201ENST00000416634 589 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 AL121601.2-201ENST00000438019 707 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 MTND1P1-201ENST00000445453 368 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms