Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RNU4-80P-201ENST00000363200 141 ntBASIC3.61□□□□□ -1.83
SHISA3A0PJX4 RNVU1-6-201ENST00000364688 164 ntBASIC3.61□□□□□ -1.83
SHISA3A0PJX4 SNORA18.3-201ENST00000384122 132 ntBASIC3.61□□□□□ -1.83
SHISA3A0PJX4 Y_RNA.441-201ENST00000384123 112 ntBASIC3.61□□□□□ -1.83
SHISA3A0PJX4 MIR208B-201ENST00000401172 77 ntBASIC3.61□□□□□ -1.83
SHISA3A0PJX4 Y_RNA.625-201ENST00000411256 107 ntBASIC3.61□□□□□ -1.83
SHISA3A0PJX4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.61□□□□□ -1.83
SHISA3A0PJX4 AC011276.1-201ENST00000469688 323 ntBASIC3.61□□□□□ -1.83
SHISA3A0PJX4 RPL21P126-201ENST00000470049 478 ntBASIC3.61□□□□□ -1.83
SHISA3A0PJX4 RPS29P19-201ENST00000479709 171 ntBASIC3.61□□□□□ -1.83
SHISA3A0PJX4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.61□□□□□ -1.83
SHISA3A0PJX4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.61□□□□□ -1.83
SHISA3A0PJX4 MIR3923-201ENST00000579521 83 ntBASIC3.61□□□□□ -1.83
SHISA3A0PJX4 MIR548AI-201ENST00000579940 88 ntBASIC3.61□□□□□ -1.83
SHISA3A0PJX4 RN7SL690P-201ENST00000582087 240 ntBASIC3.61□□□□□ -1.83
SHISA3A0PJX4 HMGN2P15-201ENST00000585707 270 ntBASIC3.61□□□□□ -1.83
SHISA3A0PJX4 AP001485.1-201ENST00000604799 199 ntBASIC3.61□□□□□ -1.83
SHISA3A0PJX4 MIR6780A-201ENST00000615089 68 ntBASIC3.61□□□□□ -1.83
SHISA3A0PJX4 AC004467.1-201ENST00000615678 330 ntBASIC3.61□□□□□ -1.83
SHISA3A0PJX4 MIR6076-201ENST00000617521 113 ntBASIC3.61□□□□□ -1.83
SHISA3A0PJX4 AL365265.1-201ENST00000621045 234 ntBASIC3.61□□□□□ -1.83
SHISA3A0PJX4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.61□□□□□ -1.83
SHISA3A0PJX4 AC091932.3-201ENST00000624223 323 ntBASIC3.61□□□□□ -1.83
SHISA3A0PJX4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SHISA3A0PJX4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SHISA3A0PJX4 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHISA3A0PJX4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SHISA3A0PJX4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
SHISA3A0PJX4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.61□□□□□ -1.83
SHISA3A0PJX4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHISA3A0PJX4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.61□□□□□ -1.83
SHISA3A0PJX4 AC002546.1-201ENST00000588041 2504 ntBASIC3.61□□□□□ -1.83
SHISA3A0PJX4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.6□□□□□ -1.83
SHISA3A0PJX4 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHISA3A0PJX4 AL359854.1-201ENST00000614203 1594 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.6□□□□□ -1.83
SHISA3A0PJX4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHISA3A0PJX4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.6□□□□□ -1.83
SHISA3A0PJX4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SHISA3A0PJX4 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHISA3A0PJX4 Y_RNA.101-201ENST00000363154 102 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 SNORD113.2-201ENST00000364166 89 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.6□□□□□ -1.83
SHISA3A0PJX4 RNU6-211P-201ENST00000384047 107 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 SNORA70F-201ENST00000384142 135 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 RNU6-804P-201ENST00000384286 107 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 RNA5SP332-201ENST00000391063 115 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 U3.22-201ENST00000391120 215 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 HMGN2P8-201ENST00000391458 268 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 AL591034.1-201ENST00000407447 340 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 RNU2-54P-201ENST00000410299 190 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 AC245291.1-201ENST00000419501 328 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 AC024067.1-201ENST00000426199 223 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 AC009237.7-201ENST00000447357 229 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 RN7SL93P-201ENST00000463035 293 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 RNU6-1219P-201ENST00000516143 112 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 RNY3P16-201ENST00000516338 101 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 RNU6-155P-201ENST00000516347 100 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.6□□□□□ -1.83
SHISA3A0PJX4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.6□□□□□ -1.83
SHISA3A0PJX4 GNRHR2P1-201ENST00000555315 631 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.6□□□□□ -1.83
SHISA3A0PJX4 AL162713.1-201ENST00000604480 262 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 MIR6798-201ENST00000612887 67 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 MIR3674-201ENST00000636576 68 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SHISA3A0PJX4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SHISA3A0PJX4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHISA3A0PJX4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.6□□□□□ -1.83
SHISA3A0PJX4 AL133383.2-201ENST00000622958 2336 ntBASIC3.6□□□□□ -1.83
SHISA3A0PJX4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHISA3A0PJX4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHISA3A0PJX4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
SHISA3A0PJX4 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHISA3A0PJX4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHISA3A0PJX4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
SHISA3A0PJX4 RNU6-653P-201ENST00000363074 106 ntBASIC3.59□□□□□ -1.83
SHISA3A0PJX4 HSPE1P26-201ENST00000405341 275 ntBASIC3.59□□□□□ -1.83
SHISA3A0PJX4 SNORA11F-201ENST00000408237 128 ntBASIC3.59□□□□□ -1.83
SHISA3A0PJX4 RNA5SP239-201ENST00000410218 129 ntBASIC3.59□□□□□ -1.83
SHISA3A0PJX4 RNU6-1199P-201ENST00000411249 104 ntBASIC3.59□□□□□ -1.83
SHISA3A0PJX4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.59□□□□□ -1.83
SHISA3A0PJX4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.59□□□□□ -1.83
SHISA3A0PJX4 AL441985.1-201ENST00000457727 251 ntBASIC3.59□□□□□ -1.83
SHISA3A0PJX4 AC109327.1-201ENST00000471666 403 ntBASIC3.59□□□□□ -1.83
SHISA3A0PJX4 AC140059.1-201ENST00000489238 361 ntBASIC3.59□□□□□ -1.83
SHISA3A0PJX4 RNU5F-2P-201ENST00000516066 82 ntBASIC3.59□□□□□ -1.83
SHISA3A0PJX4 RNU6-966P-201ENST00000516479 104 ntBASIC3.59□□□□□ -1.83
SHISA3A0PJX4 RNA5SP73-201ENST00000516744 108 ntBASIC3.59□□□□□ -1.83
SHISA3A0PJX4 RNU7-143P-201ENST00000516781 65 ntBASIC3.59□□□□□ -1.83
SHISA3A0PJX4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHISA3A0PJX4 AC025884.1-201ENST00000556034 378 ntBASIC3.59□□□□□ -1.83
SHISA3A0PJX4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.59□□□□□ -1.83
SHISA3A0PJX4 AC091152.3-201ENST00000604227 325 ntBASIC3.59□□□□□ -1.83
SHISA3A0PJX4 HSPE1P7-201ENST00000604681 321 ntBASIC3.59□□□□□ -1.83
SHISA3A0PJX4 AL034555.1-201ENST00000604816 211 ntBASIC3.59□□□□□ -1.83
SHISA3A0PJX4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.59□□□□□ -1.83
SHISA3A0PJX4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 495.9 ms