Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 snoU109.2-201ENST00000459316 135 ntBASIC2.89□□□□□ -1.95
RAI2Q9Y5P3 AP004217.1-201ENST00000480579 346 ntBASIC2.89□□□□□ -1.95
RAI2Q9Y5P3 AC108210.2-201ENST00000503681 201 ntBASIC2.89□□□□□ -1.95
RAI2Q9Y5P3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.89□□□□□ -1.95
RAI2Q9Y5P3 RNU6-1153P-201ENST00000516760 105 ntBASIC2.89□□□□□ -1.95
RAI2Q9Y5P3 RNU6-1183P-201ENST00000517054 60 ntBASIC2.89□□□□□ -1.95
RAI2Q9Y5P3 APOOP3-201ENST00000536787 586 ntBASIC2.89□□□□□ -1.95
RAI2Q9Y5P3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.89□□□□□ -1.95
RAI2Q9Y5P3 NACAP3-201ENST00000552100 481 ntBASIC2.89□□□□□ -1.95
RAI2Q9Y5P3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.89□□□□□ -1.95
RAI2Q9Y5P3 LINC00933-203ENST00000559812 219 ntBASIC2.89□□□□□ -1.95
RAI2Q9Y5P3 AMZ2P1-203ENST00000565833 850 ntBASIC2.89□□□□□ -1.95
RAI2Q9Y5P3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.89□□□□□ -1.95
RAI2Q9Y5P3 AC080078.3-201ENST00000605407 463 ntBASIC2.89□□□□□ -1.95
RAI2Q9Y5P3 AC068831.7-201ENST00000616954 363 ntBASIC2.89□□□□□ -1.95
RAI2Q9Y5P3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.89□□□□□ -1.95
RAI2Q9Y5P3 AC244517.12-201ENST00000623581 663 ntBASIC2.89□□□□□ -1.95
RAI2Q9Y5P3 AC064859.1-201ENST00000624741 174 ntBASIC2.89□□□□□ -1.95
RAI2Q9Y5P3 Z69720.2-201ENST00000624755 279 ntBASIC2.89□□□□□ -1.95
RAI2Q9Y5P3 MTND5P7-201ENST00000413558 1798 ntBASIC2.89□□□□□ -1.95
RAI2Q9Y5P3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RAI2Q9Y5P3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 SNORA63-201ENST00000363450 132 ntBASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 RNU5E-7P-201ENST00000365290 117 ntBASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 SNORA18.3-201ENST00000384122 132 ntBASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 RNU6-306P-201ENST00000384617 107 ntBASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 PCMTD1P1-201ENST00000455560 355 ntBASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 RNU6-1037P-201ENST00000459571 107 ntBASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 AC113155.1-201ENST00000511141 769 ntBASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 RNA5SP24-201ENST00000516478 95 ntBASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 RNU6-703P-201ENST00000516946 107 ntBASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 Y_RNA.708-201ENST00000516950 96 ntBASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 AC109479.2-201ENST00000517842 174 ntBASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 CBX3P7-201ENST00000532876 502 ntBASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 AL442663.2-201ENST00000554385 511 ntBASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 CYCSP39-201ENST00000565821 309 ntBASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 AC124303.1-201ENST00000605703 360 ntBASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 AC064836.2-201ENST00000609491 462 ntBASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 AL161423.1-201ENST00000613700 262 ntBASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 AL161629.2-201ENST00000615347 275 ntBASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 AC006111.3-201ENST00000622137 383 ntBASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RAI2Q9Y5P3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 Y_RNA.146-201ENST00000363549 102 ntBASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 SNORD116-29-201ENST00000384516 83 ntBASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 MIR196B-201ENST00000384852 84 ntBASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 MIR512-1-201ENST00000384913 84 ntBASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 MIR517A-201ENST00000385001 87 ntBASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 Y_RNA.579-201ENST00000390939 94 ntBASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 SNORD56-201ENST00000413522 71 ntBASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 BMS1P22-201ENST00000414726 313 ntBASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 ATG3P1-201ENST00000419507 911 ntBASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 HIGD1AP2-201ENST00000446367 280 ntBASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 SSXP4-201ENST00000451349 245 ntBASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 snoU13.28-201ENST00000459235 104 ntBASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 Y_RNA.687-201ENST00000516558 91 ntBASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 AC010186.2-204ENST00000537668 439 ntBASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 AC024153.1-201ENST00000603103 365 ntBASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 MTND4LP5-201ENST00000605152 292 ntBASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 AL121917.1-203ENST00000605534 577 ntBASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 AC025754.2-201ENST00000606491 432 ntBASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 AL627309.6-201ENST00000606857 840 ntBASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 AC007742.2-201ENST00000618226 398 ntBASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 KPNA2P1-201ENST00000458289 1591 ntBASIC2.87□□□□□ -1.95
RAI2Q9Y5P3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RAI2Q9Y5P3 RNU6-778P-201ENST00000363269 103 ntBASIC2.86□□□□□ -1.95
RAI2Q9Y5P3 RNU6-1188P-201ENST00000363795 107 ntBASIC2.86□□□□□ -1.95
RAI2Q9Y5P3 RNU6-827P-201ENST00000365553 106 ntBASIC2.86□□□□□ -1.95
RAI2Q9Y5P3 RNU6-72P-201ENST00000384285 79 ntBASIC2.86□□□□□ -1.95
RAI2Q9Y5P3 SNORA75.4-201ENST00000391278 119 ntBASIC2.86□□□□□ -1.95
RAI2Q9Y5P3 U3.37-201ENST00000408528 213 ntBASIC2.86□□□□□ -1.95
RAI2Q9Y5P3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.86□□□□□ -1.95
RAI2Q9Y5P3 AL451074.5-201ENST00000415894 435 ntBASIC2.86□□□□□ -1.95
RAI2Q9Y5P3 BX276092.3-201ENST00000424182 230 ntBASIC2.86□□□□□ -1.95
RAI2Q9Y5P3 AC005534.2-201ENST00000431047 433 ntBASIC2.86□□□□□ -1.95
RAI2Q9Y5P3 HIGD1AP11-201ENST00000438361 280 ntBASIC2.86□□□□□ -1.95
RAI2Q9Y5P3 AC124916.1-201ENST00000444020 547 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 152.9 ms