Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
NOD1Q9Y239 AC016588.2-201ENST00000632484 3021 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.61□□□□□ -1.67
NOD1Q9Y239 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
NOD1Q9Y239 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.61□□□□□ -1.67
NOD1Q9Y239 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
NOD1Q9Y239 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.61□□□□□ -1.67
NOD1Q9Y239 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NOD1Q9Y239 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NOD1Q9Y239 Y_RNA.262-201ENST00000364641 102 ntBASIC4.61□□□□□ -1.67
NOD1Q9Y239 RNU6-487P-201ENST00000365430 104 ntBASIC4.61□□□□□ -1.67
NOD1Q9Y239 AC005300.1-201ENST00000428401 373 ntBASIC4.61□□□□□ -1.67
NOD1Q9Y239 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.61□□□□□ -1.67
NOD1Q9Y239 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.61□□□□□ -1.67
NOD1Q9Y239 HMGB1P37-201ENST00000439613 609 ntBASIC4.61□□□□□ -1.67
NOD1Q9Y239 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NOD1Q9Y239 AC090525.1-201ENST00000479116 478 ntBASIC4.61□□□□□ -1.67
NOD1Q9Y239 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.61□□□□□ -1.67
NOD1Q9Y239 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.61□□□□□ -1.67
NOD1Q9Y239 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.61□□□□□ -1.67
NOD1Q9Y239 AC233702.9-201ENST00000581528 203 ntBASIC4.61□□□□□ -1.67
NOD1Q9Y239 MIR4444-1-201ENST00000581696 74 ntBASIC4.61□□□□□ -1.67
NOD1Q9Y239 MIR4444-2-201ENST00000584390 74 ntBASIC4.61□□□□□ -1.67
NOD1Q9Y239 RN7SL435P-201ENST00000584418 282 ntBASIC4.61□□□□□ -1.67
NOD1Q9Y239 AL110115.1-201ENST00000614396 364 ntBASIC4.61□□□□□ -1.67
NOD1Q9Y239 AC092628.2-201ENST00000622492 339 ntBASIC4.61□□□□□ -1.67
NOD1Q9Y239 AC073308.1-201ENST00000623696 305 ntBASIC4.61□□□□□ -1.67
NOD1Q9Y239 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.61□□□□□ -1.67
NOD1Q9Y239 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.61□□□□□ -1.67
NOD1Q9Y239 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
NOD1Q9Y239 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NOD1Q9Y239 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
NOD1Q9Y239 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.61□□□□□ -1.67
NOD1Q9Y239 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NOD1Q9Y239 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
NOD1Q9Y239 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NOD1Q9Y239 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NOD1Q9Y239 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NOD1Q9Y239 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NOD1Q9Y239 AC092593.1-201ENST00000515413 1815 ntBASIC4.6□□□□□ -1.67
NOD1Q9Y239 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NOD1Q9Y239 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NOD1Q9Y239 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.6□□□□□ -1.67
NOD1Q9Y239 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NOD1Q9Y239 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NOD1Q9Y239 Y_RNA.101-201ENST00000363154 102 ntBASIC4.6□□□□□ -1.67
NOD1Q9Y239 RNU4-80P-201ENST00000363200 141 ntBASIC4.6□□□□□ -1.67
NOD1Q9Y239 MIR549A-201ENST00000385268 96 ntBASIC4.6□□□□□ -1.67
NOD1Q9Y239 RPL36AP10-201ENST00000421785 322 ntBASIC4.6□□□□□ -1.67
NOD1Q9Y239 OOSP1P1-201ENST00000423265 274 ntBASIC4.6□□□□□ -1.67
NOD1Q9Y239 RAB28P5-201ENST00000427490 651 ntBASIC4.6□□□□□ -1.67
NOD1Q9Y239 AL445584.1-201ENST00000431451 330 ntBASIC4.6□□□□□ -1.67
NOD1Q9Y239 GOT2P5-201ENST00000433995 546 ntBASIC4.6□□□□□ -1.67
NOD1Q9Y239 snoU13.22-201ENST00000459428 104 ntBASIC4.6□□□□□ -1.67
NOD1Q9Y239 RNA5SP103-201ENST00000459503 118 ntBASIC4.6□□□□□ -1.67
NOD1Q9Y239 IGKV2D-19-201ENST00000523346 262 ntBASIC4.6□□□□□ -1.67
NOD1Q9Y239 RPL23AP97-201ENST00000568955 471 ntBASIC4.6□□□□□ -1.67
NOD1Q9Y239 MIR548AI-201ENST00000579940 88 ntBASIC4.6□□□□□ -1.67
NOD1Q9Y239 MIR3145-201ENST00000580727 82 ntBASIC4.6□□□□□ -1.67
NOD1Q9Y239 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
NOD1Q9Y239 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NOD1Q9Y239 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NOD1Q9Y239 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
NOD1Q9Y239 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.6□□□□□ -1.67
NOD1Q9Y239 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NOD1Q9Y239 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.6□□□□□ -1.67
NOD1Q9Y239 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
NOD1Q9Y239 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.59□□□□□ -1.67
NOD1Q9Y239 RNU4-56P-201ENST00000364700 142 ntBASIC4.59□□□□□ -1.67
NOD1Q9Y239 Y_RNA.398-201ENST00000383952 99 ntBASIC4.59□□□□□ -1.67
NOD1Q9Y239 RNU6-793P-201ENST00000384233 104 ntBASIC4.59□□□□□ -1.67
NOD1Q9Y239 AL512633.1-201ENST00000399931 655 ntBASIC4.59□□□□□ -1.67
NOD1Q9Y239 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.59□□□□□ -1.67
NOD1Q9Y239 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.59□□□□□ -1.67
NOD1Q9Y239 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.59□□□□□ -1.67
NOD1Q9Y239 AC007215.1-201ENST00000464893 276 ntBASIC4.59□□□□□ -1.67
NOD1Q9Y239 AC006445.2-201ENST00000510061 472 ntBASIC4.59□□□□□ -1.67
NOD1Q9Y239 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
NOD1Q9Y239 MIR3944-201ENST00000581277 108 ntBASIC4.59□□□□□ -1.67
NOD1Q9Y239 MIR3936-201ENST00000584304 110 ntBASIC4.59□□□□□ -1.67
NOD1Q9Y239 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.59□□□□□ -1.67
NOD1Q9Y239 AC004467.1-201ENST00000615678 330 ntBASIC4.59□□□□□ -1.67
NOD1Q9Y239 MIR3199-2-201ENST00000636243 86 ntBASIC4.59□□□□□ -1.67
NOD1Q9Y239 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.59□□□□□ -1.67
NOD1Q9Y239 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
NOD1Q9Y239 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
NOD1Q9Y239 AC068254.2-201ENST00000623938 3577 ntBASIC4.59□□□□□ -1.68
NOD1Q9Y239 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
NOD1Q9Y239 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.58□□□□□ -1.68
NOD1Q9Y239 AC099654.7-201ENST00000635788 2127 ntBASIC4.58□□□□□ -1.68
NOD1Q9Y239 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NOD1Q9Y239 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NOD1Q9Y239 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NOD1Q9Y239 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NOD1Q9Y239 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NOD1Q9Y239 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
NOD1Q9Y239 MIR195-201ENST00000385194 87 ntBASIC4.58□□□□□ -1.68
NOD1Q9Y239 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NOD1Q9Y239 EI24P2-201ENST00000397776 1076 ntBASIC4.58□□□□□ -1.68
NOD1Q9Y239 RNU6-1135P-201ENST00000411083 103 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms